RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 SSRP1Q08945 709 aaKnown RBP9.74□□□□□ -0.85
PABPC1-213ENST00000519848 SMAD2Q15796 467 aaKnown RBP9.74□□□□□ -0.85
PABPC1-213ENST00000519848 UBXN11Q5T124 520 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 SYCE2Q6PIF2 218 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 SLC24A5Q71RS6 500 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 NME8Q8N427 588 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 CCDC148Q8NFR7 591 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 HELQQ8TDG4 1101 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 AUTS2Q8WXX7 1259 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 FDXACB1Q9BRP7 624 aaPredicted RBP9.74□□□□□ -0.85
PABPC1-213ENST00000519848 APOL5Q9BWW9 433 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 PLVAPQ9BX97 442 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 FTHL17Q9BXU8 183 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 NIFKQ9BYG3 293 aaKnown RBP9.74□□□□□ -0.85
PABPC1-213ENST00000519848 LMAN2LQ9H0V9 348 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 SMOC2Q9H3U7 446 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 IFT122Q9HBG6 1241 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 XPNPEP1Q9NQW7 623 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 PDRG1Q9NUG6 133 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 TMEM161AQ9NX61 479 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 RGL1Q9NZL6 768 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 STK17AQ9UEE5 414 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 AKT3Q9Y243 479 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 USP15Q9Y4E8 981 aaPredicted RBP9.74□□□□□ -0.85
PABPC1-213ENST00000519848 SAMM50Q9Y512 469 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 CYP46A1Q9Y6A2 500 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 STK36Q9NRP7 1315 aa9.74□□□□□ -0.85
PABPC1-213ENST00000519848 DENND3A2RUS2 1198 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 RNF223E7ERA6 249 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 ST8SIA5O15466 376 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 EIF4BP23588 611 aaKnown RBP9.73□□□□□ -0.85
PABPC1-213ENST00000519848 PSMA5P28066 241 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 GNA11P29992 359 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 SSTR3P32745 418 aaPredicted RBP9.73□□□□□ -0.85
PABPC1-213ENST00000519848 PLA2G5P39877 138 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 USP11P51784 963 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 CAMK2BQ13554 666 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 DUSP6Q16828 381 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 LETM2Q2VYF4 491 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 PLPP4Q5VZY2 271 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 MIER3Q7Z3K6 550 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 ADHFE1Q8IWW8 467 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 EFHBQ8N7U6 833 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 NSUN7Q8NE18 718 aaKnown RBP9.73□□□□□ -0.85
PABPC1-213ENST00000519848 TATDN2Q93075 761 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 GLT8D2Q9H1C3 349 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 S1PR5Q9H228 398 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 CXCL16Q9H2A7 254 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 AAASQ9NRG9 546 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 DNAJB4Q9UDY4 337 aa9.73□□□□□ -0.85
PABPC1-213ENST00000519848 DDX25Q9UHL0 483 aaKnown RBP9.73□□□□□ -0.85
PABPC1-213ENST00000519848 FAM187AA6NFU0 413 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 GPR37L1O60883 481 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 EYA4O95677 639 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 EDN1P05305 212 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 WEE2P0C1S8 567 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 SP100P23497 879 aaPredicted RBP9.72□□□□□ -0.85
PABPC1-213ENST00000519848 JAK3P52333 1124 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 PRSS12P56730 875 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 PPP2R5CQ13362 524 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 SMAD4Q13485 552 aaKnown RBP9.72□□□□□ -0.85
PABPC1-213ENST00000519848 NONOQ15233 471 aaKnown RBP eCLIP9.72□□□□□ -0.85
PABPC1-213ENST00000519848 TMEM31Q5JXX7 168 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 PIK3AP1Q6ZUJ8 805 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 HFE2Q6ZVN8 426 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 SLC39A11Q8N1S5 342 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 RNF169Q8NCN4 708 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 CCDC12Q8WUD4 166 aaPredicted RBP9.72□□□□□ -0.85
PABPC1-213ENST00000519848 SUSD6Q92537 303 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 TMEM143Q96AN5 459 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 PHOX2BQ99453 314 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 KIF2CQ99661 725 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 TMEM117Q9H0C3 514 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 TMEM60Q9H2L4 133 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 C1orf112Q9NSG2 853 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 CACNG4Q9UBN1 327 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 CD207Q9UJ71 328 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 PCDHB7Q9Y5E2 793 aa9.72□□□□□ -0.85
PABPC1-213ENST00000519848 LOC730098B7Z3J9 87 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 GPR182O15218 404 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 MAP3K7O43318 606 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 RNF40O75150 1001 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 MAFO75444 373 aaPredicted RBP9.71□□□□□ -0.86
PABPC1-213ENST00000519848 STAG3L1P0CL83 205 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 HOXA11P31270 313 aaPredicted RBP9.71□□□□□ -0.86
PABPC1-213ENST00000519848 NDUFV1P49821 464 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 CYP4A11Q02928 519 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 TBC1D8BQ0IIM8 1120 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 COASYQ13057 564 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 CTTNQ14247 550 aaKnown RBP9.71□□□□□ -0.86
PABPC1-213ENST00000519848 AMHR2Q16671 573 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 XKR3Q5GH77 459 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 LLGL2Q6P1M3 1020 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 KCNT2Q6UVM3 1135 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 MOXD1Q6UVY6 613 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 AGMOQ6ZNB7 445 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 ZNF280BQ86YH2 543 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 RNF135Q8IUD6 432 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 ASAP3Q8TDY4 903 aa9.71□□□□□ -0.86
PABPC1-213ENST00000519848 GTF3C6Q969F1 213 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms