RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 EMSYQ7Z589 1322 aa9.17□□□□□ -0.94
HMGB4-203ENST00000519684 DENND3A2RUS2 1198 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 TISP43B9A030 160 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 ZNF185O15231 689 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 SORBS3O60504 671 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 PALMO75781 387 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 KLRC1P26715 233 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 DRAP1Q14919 205 aaPredicted RBP9.16□□□□□ -0.94
HMGB4-203ENST00000519684 XKR3Q5GH77 459 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 ALKBH5Q6P6C2 394 aaKnown RBP9.16□□□□□ -0.94
HMGB4-203ENST00000519684 ABHD15Q6UXT9 468 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 LBX2Q6XYB7 198 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 MAP4K3Q8IVH8 894 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 PROCA1Q8NCQ7 364 aaPredicted RBP9.16□□□□□ -0.94
HMGB4-203ENST00000519684 TMEM161BQ8NDZ6 487 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 HNRNPLLQ8WVV9 542 aaKnown RBP9.16□□□□□ -0.94
HMGB4-203ENST00000519684 UPF1Q92900 1129 aaKnown RBP eCLIP9.16□□□□□ -0.94
HMGB4-203ENST00000519684 PNKPQ96T60 521 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 MPHOSPH6Q99547 160 aaKnown RBP9.16□□□□□ -0.94
HMGB4-203ENST00000519684 FHDC1Q9C0D6 1143 aaPredicted RBP9.16□□□□□ -0.94
HMGB4-203ENST00000519684 ELP3Q9H9T3 547 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 KCNG1Q9UIX4 513 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 SALL4Q9UJQ4 1053 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 NAGPAQ9UK23 515 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 ZNF862O60290 1169 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 EVI5O60447 810 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 ICAM3P32942 547 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 NOP2P46087 812 aaKnown RBP9.16□□□□□ -0.94
HMGB4-203ENST00000519684 ALDH5A1P51649 535 aaPredicted RBP9.16□□□□□ -0.94
HMGB4-203ENST00000519684 PPATQ06203 517 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 TTLL12Q14166 644 aaPredicted RBP9.16□□□□□ -0.94
HMGB4-203ENST00000519684 NFRKBQ6P4R8 1299 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 SEPT14Q6ZU15 432 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 USP37Q86T82 979 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 NCAPG2Q86XI2 1143 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 CCDC60Q8IWA6 550 aaPredicted RBP9.16□□□□□ -0.94
HMGB4-203ENST00000519684 OTUD5Q96G74 571 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 PACSIN1Q9BY11 444 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 CYP26B1Q9NR63 512 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 FAM53CQ9NYF3 392 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 INTUQ9ULD6 942 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 IGSF9BQ9UPX0 1349 aa9.16□□□□□ -0.94
HMGB4-203ENST00000519684 TARSL2A2RTX5 802 aaKnown RBP9.15□□□□□ -0.94
HMGB4-203ENST00000519684 NCK2O43639 380 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 H2AFZP0C0S5 128 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 MXI1P50539 228 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 POLGP54098 1239 aaPredicted RBP9.15□□□□□ -0.94
HMGB4-203ENST00000519684 RTP1P59025 263 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 CNTN2Q02246 1040 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 C2orf54Q08AI8 447 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 ARHGAP44Q17R89 818 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 LONRF2Q1L5Z9 754 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 MTERF2Q49AM1 385 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 MAP9Q49MG5 647 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 H2AFVQ71UI9 128 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 CYFIP1Q7L576 1253 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 ERO1BQ86YB8 467 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 ANKRD13AQ8IZ07 590 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 U2AF1L4Q8WU68 220 aaKnown RBP9.15□□□□□ -0.94
HMGB4-203ENST00000519684 CNKSR2Q8WXI2 1034 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 TAF4BQ92750 862 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 BICD1Q96G01 975 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 PAGR1Q9BTK6 254 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 KIFC3Q9BVG8 833 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 SPATC1LQ9H0A9 340 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 POLR3FQ9H1D9 316 aaPredicted RBP9.15□□□□□ -0.94
HMGB4-203ENST00000519684 ZNF302Q9NR11 478 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 RNF216Q9NWF9 866 aaPredicted RBP9.15□□□□□ -0.94
HMGB4-203ENST00000519684 BTBD7Q9P203 1132 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 PCDHGC5Q9Y5F6 944 aa9.15□□□□□ -0.94
HMGB4-203ENST00000519684 A0A0G2JLL6 359 aaPredicted RBP9.15□□□□□ -0.95
HMGB4-203ENST00000519684 GOLGA8IPA6NC78 632 aa9.15□□□□□ -0.95
HMGB4-203ENST00000519684 GOLGA8JA6NMD2 632 aa9.15□□□□□ -0.95
HMGB4-203ENST00000519684 STBD1O95210 358 aa9.15□□□□□ -0.95
HMGB4-203ENST00000519684 GCLMP48507 274 aa9.15□□□□□ -0.95
HMGB4-203ENST00000519684 DLG4P78352 724 aa9.15□□□□□ -0.95
HMGB4-203ENST00000519684 ITIH3Q06033 890 aa9.15□□□□□ -0.95
HMGB4-203ENST00000519684 SNRNP35Q16560 246 aaKnown RBP9.15□□□□□ -0.95
HMGB4-203ENST00000519684 WDR93Q6P2C0 686 aa9.15□□□□□ -0.95
HMGB4-203ENST00000519684 DLK2Q6UY11 383 aa9.15□□□□□ -0.95
HMGB4-203ENST00000519684 ZNF572Q7Z3I7 529 aaPredicted RBP9.15□□□□□ -0.95
HMGB4-203ENST00000519684 PRRT2Q7Z6L0 340 aaPredicted RBP9.15□□□□□ -0.95
HMGB4-203ENST00000519684 CREG2Q8IUH2 290 aa9.15□□□□□ -0.95
HMGB4-203ENST00000519684 COG1Q8WTW3 980 aa9.15□□□□□ -0.95
HMGB4-203ENST00000519684 LMBR1Q8WVP7 490 aa9.15□□□□□ -0.95
HMGB4-203ENST00000519684 POMGNT1Q8WZA1 660 aa9.15□□□□□ -0.95
HMGB4-203ENST00000519684 PSMB7Q99436 277 aa9.15□□□□□ -0.95
HMGB4-203ENST00000519684 NTPCRQ9BSD7 190 aaKnown RBP9.15□□□□□ -0.95
HMGB4-203ENST00000519684 TLR10Q9BXR5 811 aa9.15□□□□□ -0.95
HMGB4-203ENST00000519684 UBE2TQ9NPD8 197 aaPredicted RBP9.15□□□□□ -0.95
HMGB4-203ENST00000519684 RNF14Q9UBS8 474 aa9.15□□□□□ -0.95
HMGB4-203ENST00000519684 MYH9P35579 1960 aaKnown RBP9.14□□□□□ -0.95
HMGB4-203ENST00000519684 ANKRD63C9JTQ0 380 aa9.14□□□□□ -0.95
HMGB4-203ENST00000519684 PDE2AO00408 941 aaPredicted RBP9.14□□□□□ -0.95
HMGB4-203ENST00000519684 DDX3XO00571 662 aaKnown RBP eCLIP9.14□□□□□ -0.95
HMGB4-203ENST00000519684 CXCL11O14625 94 aa9.14□□□□□ -0.95
HMGB4-203ENST00000519684 TBC1D8O95759 1140 aa9.14□□□□□ -0.95
HMGB4-203ENST00000519684 FTCDO95954 541 aa9.14□□□□□ -0.95
HMGB4-203ENST00000519684 OATP04181 439 aa9.14□□□□□ -0.95
HMGB4-203ENST00000519684 TNFAIP3P21580 790 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms