RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 G3BP1Q13283 466 aaKnown RBP eCLIP7.97□□□□□ -1.133e-8■■■□□ 18.8
CTNNA1-216ENST00000519489 STXBP2Q15833 593 aa7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 CEP68Q76N32 757 aa7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 GET4Q7L5D6 327 aaPredicted RBP7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 LONP2Q86WA8 852 aa7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 FTHL17Q9BXU8 183 aa7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 FZD8Q9H461 694 aa7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 HEBP1Q9NRV9 189 aa7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 BAZ2AQ9UIF9 1905 aaKnown RBP7.97□□□□□ -1.13
CTNNA1-216ENST00000519489 LOXHD1Q8IVV2 1947 aa7.96□□□□□ -1.13
CTNNA1-216ENST00000519489 MBLAC1A4D2B0 266 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 PAPLNO95428 1278 aa7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 NTRK1P04629 796 aa7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 CTSAP10619 480 aa7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 EIF2AK2P19525 551 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 CXCL12P48061 93 aa7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 METAP2P50579 478 aaKnown RBP eCLIP7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 CLLU1OSQ5K130 101 aa7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 BTNL9Q6UXG8 535 aa7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 RAB44Q7Z6P3 723 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 KRI1Q8N9T8 703 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 IL31RAQ8NI17 732 aa7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 TMEM40Q8WWA1 233 aa7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 ZNF775Q96BV0 537 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 LOXL4Q96JB6 756 aa7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 ADAM2Q99965 735 aa7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 KXD1Q9BQD3 176 aa7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 PLA2G2FQ9BZM2 168 aa7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 CCDC86Q9H6F5 360 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 MAN1C1Q9NR34 630 aa7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 RGS18Q9NS28 235 aa7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 NDRG2Q9UN36 371 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 ZFHX3Q15911 3703 aa7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 IGSF9BQ9UPX0 1349 aa7.96□□□□□ -1.14
CTNNA1-216ENST00000519489 MYH8P13535 1937 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 INPPL1O15357 1258 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 ST8SIA5O15466 376 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 B4GALT3O60512 393 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 NMT2O60551 498 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 EIF3JO75822 258 aaKnown RBP7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 WISP1O95388 367 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 JUNDP17535 347 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 CNR2P34972 360 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 PPM1AP35813 382 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 SMCPP49901 116 aaPredicted RBP7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 CCR3P51677 355 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 NTHL1P78549 312 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 SIM1P81133 766 aaPredicted RBP7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 PAK2Q13177 524 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 TAF2Q6P1X5 1199 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 TMED8Q6PL24 325 aaPredicted RBP7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 ZNF852Q6ZMS4 543 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 WDR63Q8IWG1 891 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 NELL2Q99435 816 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 REPIN1Q9BWE0 567 aaKnown RBP7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 RHOBTB2Q9BYZ6 727 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 TMEM117Q9H0C3 514 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 FAM49AQ9H0Q0 323 aaPredicted RBP7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 PRORYQ9H606 182 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 LMAN1LQ9HAT1 526 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 MKNK2Q9HBH9 465 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 VPS45Q9NRW7 570 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 MTMR7Q9Y216 660 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 NOC2LQ9Y3T9 749 aaKnown RBP7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 FLNCQ14315 2725 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 DOPEY2Q9Y3R5 2298 aa7.95□□□□□ -1.14
CTNNA1-216ENST00000519489 A0A087WV48 116 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 ZMYND10O75800 440 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 NR3C2P08235 984 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 SPATA31D3P0C874 917 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 CHRNB1P11230 501 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 GNAT1P11488 350 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 ITPKBP27987 946 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 PXNP49023 591 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 BCAR1P56945 870 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 GUCA2AQ02747 115 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 CFHR1Q03591 330 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 DSC3Q14574 896 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 CCDC184Q52MB2 194 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 UTP14CQ5TAP6 766 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 DAB2IPQ5VWQ8 1189 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 CCNI2Q6ZMN8 369 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 Q6ZS52 159 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 SPATA31D4Q6ZUB0 917 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 SLC24A5Q71RS6 500 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 PIP4P1Q86T03 277 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 RETREG3Q86VR2 466 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 WDR5BQ86VZ2 330 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 MARCH9Q86YJ5 346 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 NEDD1Q8NHV4 660 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 NSUN6Q8TEA1 469 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 SMG7Q92540 1137 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 STAMQ92783 540 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 RMDN3Q96TC7 470 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 MPHOSPH6Q99547 160 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 SEMA4CQ9C0C4 833 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 IL17RBQ9NRM6 502 aa7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 RBM12Q9NTZ6 932 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.94□□□□□ -1.14
CTNNA1-216ENST00000519489 SQORQ9Y6N5 450 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms