RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 SKIP12755 728 aa23.67■■□□□ 1.38
ARFGEF1-206ENST00000519436 U2AF2P26368 475 aaKnown RBP eCLIP23.67■■□□□ 1.38
ARFGEF1-206ENST00000519436 ARL2P36404 184 aa23.67■■□□□ 1.38
ARFGEF1-206ENST00000519436 POU5F1BQ06416 359 aa23.67■■□□□ 1.38
ARFGEF1-206ENST00000519436 EP400NLQ6ZTU2 488 aa23.67■■□□□ 1.38
ARFGEF1-206ENST00000519436 CATSPER3Q86XQ3 398 aa23.67■■□□□ 1.38
ARFGEF1-206ENST00000519436 NOSTRINQ8IVI9 506 aa23.67■■□□□ 1.38
ARFGEF1-206ENST00000519436 EFHBQ8N7U6 833 aa23.67■■□□□ 1.38
ARFGEF1-206ENST00000519436 FAM184AQ8NB25 1140 aa23.67■■□□□ 1.38
ARFGEF1-206ENST00000519436 RNF149Q8NC42 400 aa23.67■■□□□ 1.38
ARFGEF1-206ENST00000519436 PIGOQ8TEQ8 1089 aa23.67■■□□□ 1.38
ARFGEF1-206ENST00000519436 MRPS27Q92552 414 aaKnown RBP23.67■■□□□ 1.38
ARFGEF1-206ENST00000519436 LPPQ93052 612 aa23.67■■□□□ 1.38
ARFGEF1-206ENST00000519436 TLR9Q9NR96 1032 aa23.67■■□□□ 1.38
ARFGEF1-206ENST00000519436 DGAT1O75907 488 aa23.66■■□□□ 1.38
ARFGEF1-206ENST00000519436 PBX3P40426 434 aa23.66■■□□□ 1.38
ARFGEF1-206ENST00000519436 PTENP60484 403 aa23.66■■□□□ 1.38
ARFGEF1-206ENST00000519436 MXD4Q14582 209 aaPredicted RBP23.66■■□□□ 1.38
ARFGEF1-206ENST00000519436 UBXN11Q5T124 520 aa23.66■■□□□ 1.38
ARFGEF1-206ENST00000519436 MRPL10Q7Z7H8 261 aaKnown RBP23.66■■□□□ 1.38
ARFGEF1-206ENST00000519436 IFNLR1Q8IU57 520 aaPredicted RBP23.66■■□□□ 1.38
ARFGEF1-206ENST00000519436 KHSRPQ92945 711 aaKnown RBP eCLIP23.66■■□□□ 1.381e-7■■■□□ 15.1
ARFGEF1-206ENST00000519436 PPP2R3CQ969Q6 453 aa23.66■■□□□ 1.38
ARFGEF1-206ENST00000519436 MSLNLQ96KJ4 702 aa23.66■■□□□ 1.38
ARFGEF1-206ENST00000519436 ZNF558Q96NG5 402 aa23.66■■□□□ 1.38
ARFGEF1-206ENST00000519436 CLEC1BQ9P126 229 aa23.66■■□□□ 1.38
ARFGEF1-206ENST00000519436 MED24O75448 989 aa23.65■■□□□ 1.38
ARFGEF1-206ENST00000519436 OFD1O75665 1012 aa23.65■■□□□ 1.38
ARFGEF1-206ENST00000519436 OR52Z1P0C646 297 aa23.65■■□□□ 1.38
ARFGEF1-206ENST00000519436 TECP42680 631 aa23.65■■□□□ 1.38
ARFGEF1-206ENST00000519436 NRIP1P48552 1158 aa23.65■■□□□ 1.38
ARFGEF1-206ENST00000519436 TRAPPC10P48553 1259 aa23.65■■□□□ 1.38
ARFGEF1-206ENST00000519436 TOB1P50616 345 aaPredicted RBP23.65■■□□□ 1.38
ARFGEF1-206ENST00000519436 RAB27AP51159 221 aa23.65■■□□□ 1.38
ARFGEF1-206ENST00000519436 TTC38Q5R3I4 469 aa23.65■■□□□ 1.38
ARFGEF1-206ENST00000519436 PDE12Q6L8Q7 609 aaKnown RBP23.65■■□□□ 1.38
ARFGEF1-206ENST00000519436 SLC39A11Q8N1S5 342 aa23.65■■□□□ 1.38
ARFGEF1-206ENST00000519436 ASAP3Q8TDY4 903 aa23.65■■□□□ 1.38
ARFGEF1-206ENST00000519436 RSPH1Q8WYR4 309 aa23.65■■□□□ 1.38
ARFGEF1-206ENST00000519436 POLR3CQ9BUI4 534 aaPredicted RBP23.65■■□□□ 1.38
ARFGEF1-206ENST00000519436 TUFT1Q9NNX1 390 aa23.65■■□□□ 1.38
ARFGEF1-206ENST00000519436 PCDHB2Q9Y5E7 798 aa23.65■■□□□ 1.38
ARFGEF1-206ENST00000519436 CD2BP2O95400 341 aaKnown RBP23.64■■□□□ 1.37
ARFGEF1-206ENST00000519436 GLP2RO95838 553 aa23.64■■□□□ 1.37
ARFGEF1-206ENST00000519436 LONRF3Q496Y0 759 aa23.64■■□□□ 1.37
ARFGEF1-206ENST00000519436 RBM23Q86U06 439 aaKnown RBP23.64■■□□□ 1.37
ARFGEF1-206ENST00000519436 GJD3Q8N144 294 aa23.64■■□□□ 1.37
ARFGEF1-206ENST00000519436 MICAL1Q8TDZ2 1067 aa23.64■■□□□ 1.37
ARFGEF1-206ENST00000519436 MRPL9Q9BYD2 267 aaKnown RBP23.64■■□□□ 1.37
ARFGEF1-206ENST00000519436 SPG21Q9NZD8 308 aa23.64■■□□□ 1.37
ARFGEF1-206ENST00000519436 GLRA2P23416 452 aa23.63■■□□□ 1.37
ARFGEF1-206ENST00000519436 PPM1AP35813 382 aa23.63■■□□□ 1.37
ARFGEF1-206ENST00000519436 PCBP1Q15365 356 aaKnown RBP eCLIP23.63■■□□□ 1.376e-7■■■□□ 15.8
ARFGEF1-206ENST00000519436 AGMOQ6ZNB7 445 aa23.63■■□□□ 1.37
ARFGEF1-206ENST00000519436 EPHX3Q9H6B9 360 aa23.63■■□□□ 1.37
ARFGEF1-206ENST00000519436 TLE6Q9H808 572 aa23.63■■□□□ 1.37
ARFGEF1-206ENST00000519436 PUF60Q9UHX1 559 aaKnown RBP23.63■■□□□ 1.37
ARFGEF1-206ENST00000519436 DBR1Q9UK59 544 aaKnown RBP23.63■■□□□ 1.37
ARFGEF1-206ENST00000519436 PER2O15055 1255 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 MBTPS2O43462 519 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 EYA4O95677 639 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 RPA1P27694 616 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 BCAR1P56945 870 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 CAPSQ13938 189 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 KCNC3Q14003 757 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 NBR1Q14596 966 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 SMAD2Q15796 467 aaKnown RBP23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 CLUL1Q15846 466 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 AMHR2Q16671 573 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 DUSP6Q16828 381 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 NOMO2Q5JPE7 1267 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 GLB1LQ6UWU2 654 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 VN1R2Q8NFZ6 395 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 TMX3Q96JJ7 454 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 NACC1Q96RE7 527 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 NFKBIZQ9BYH8 718 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 NRDE2Q9H7Z3 1164 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 TBC1D13Q9NVG8 400 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 PLXNA4Q9HCM2 1894 aa23.62■■□□□ 1.37
ARFGEF1-206ENST00000519436 C19orf67A6NJJ6 358 aa23.61■■□□□ 1.37
ARFGEF1-206ENST00000519436 ST18O60284 1047 aa23.61■■□□□ 1.37
ARFGEF1-206ENST00000519436 TSPAN1O60635 241 aa23.61■■□□□ 1.37
ARFGEF1-206ENST00000519436 FXR2P51116 673 aaKnown RBP eCLIP23.61■■□□□ 1.37
ARFGEF1-206ENST00000519436 KRT17Q04695 432 aa23.61■■□□□ 1.37
ARFGEF1-206ENST00000519436 MBTD1Q05BQ5 628 aa23.61■■□□□ 1.37
ARFGEF1-206ENST00000519436 SMAD4Q13485 552 aaKnown RBP23.61■■□□□ 1.37
ARFGEF1-206ENST00000519436 PGBD4Q96DM1 585 aa23.61■■□□□ 1.37
ARFGEF1-206ENST00000519436 NGRNQ9NPE2 291 aaKnown RBP23.61■■□□□ 1.37
ARFGEF1-206ENST00000519436 PRKAG3Q9UGI9 489 aa23.61■■□□□ 1.37
ARFGEF1-206ENST00000519436 CD207Q9UJ71 328 aa23.61■■□□□ 1.37
ARFGEF1-206ENST00000519436 FAM50BQ9Y247 325 aa23.61■■□□□ 1.37
ARFGEF1-206ENST00000519436 NT5C1B-RDH14C9J2C7 533 aa23.6■■□□□ 1.37
ARFGEF1-206ENST00000519436 AXLP30530 894 aa23.6■■□□□ 1.37
ARFGEF1-206ENST00000519436 ALDH7A1P49419 539 aaKnown RBP23.6■■□□□ 1.37
ARFGEF1-206ENST00000519436 NDUFV1P49821 464 aa23.6■■□□□ 1.37
ARFGEF1-206ENST00000519436 AFF1P51825 1210 aaKnown RBP23.6■■□□□ 1.37
ARFGEF1-206ENST00000519436 ZP2Q05996 745 aa23.6■■□□□ 1.37
ARFGEF1-206ENST00000519436 COASYQ13057 564 aa23.6■■□□□ 1.37
ARFGEF1-206ENST00000519436 GNL2Q13823 731 aaKnown RBP23.6■■□□□ 1.37
ARFGEF1-206ENST00000519436 TFDP1Q14186 410 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms