RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 RIC3Q7Z5B4 369 aa12.24□□□□□ -0.45
SPIDR-211ENST00000519401 NANOGNBQ7Z5D8 188 aa12.24□□□□□ -0.45
SPIDR-211ENST00000519401 CKAP2Q8WWK9 683 aa12.24□□□□□ -0.45
SPIDR-211ENST00000519401 TAF4BQ92750 862 aa12.24□□□□□ -0.45
SPIDR-211ENST00000519401 DGCR14Q96DF8 476 aaKnown RBP12.24□□□□□ -0.45
SPIDR-211ENST00000519401 SAP30BPQ9UHR5 308 aaKnown RBP12.24□□□□□ -0.45
SPIDR-211ENST00000519401 STXBP5LQ9Y2K9 1186 aa12.24□□□□□ -0.45
SPIDR-211ENST00000519401 SCN7AQ01118 1682 aa12.24□□□□□ -0.45
SPIDR-211ENST00000519401 BTNL10A8MVZ5 291 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 TCP11X1B4DZS4 312 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 LGR5O75473 907 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 DCTN3O75935 186 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 S100A1P23297 94 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 TM4SF1P30408 202 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 STIP1P31948 543 aaKnown RBP12.23□□□□□ -0.45
SPIDR-211ENST00000519401 NFIXQ14938 502 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 MTFR1Q15390 333 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 NAB2Q15742 525 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 ZCWPW2Q504Y3 356 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 DENND2CQ68D51 928 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 C16orf87Q6PH81 154 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 B3GNT6Q6ZMB0 384 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 C4orf50Q6ZRC1 276 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 KLHL7Q8IXQ5 586 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 ADSSL1Q8N142 457 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 NUP93Q8N1F7 819 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 ANKLE1Q8NAG6 615 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 FNDC8Q8TC99 324 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 MPP4Q96JB8 637 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 FMO2Q99518 471 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 USP40Q9NVE5 1235 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 DCAF8L1A6NGE4 600 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 POLRMTO00411 1230 aaKnown RBP12.23□□□□□ -0.45
SPIDR-211ENST00000519401 FUT4P22083 530 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 FLT3P36888 993 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 EIF4A3P38919 411 aaKnown RBP12.23□□□□□ -0.45
SPIDR-211ENST00000519401 TXKP42681 527 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 POLGP54098 1239 aaPredicted RBP12.23□□□□□ -0.45
SPIDR-211ENST00000519401 EMP3P54852 163 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 RPL26P61254 145 aaKnown RBP12.23□□□□□ -0.45
SPIDR-211ENST00000519401 PSMC1P62191 440 aaKnown RBP12.23□□□□□ -0.45
SPIDR-211ENST00000519401 TCERG1LQ5VWI1 586 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 PHLDB3Q6NSJ2 640 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 SCAIQ8N9R8 606 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 AIFM3Q96NN9 605 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 ROPN1BQ9BZX4 212 aaPredicted RBP12.23□□□□□ -0.45
SPIDR-211ENST00000519401 EPB41L4BQ9H329 900 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 ROPN1Q9HAT0 212 aaPredicted RBP12.23□□□□□ -0.45
SPIDR-211ENST00000519401 NLRC4Q9NPP4 1024 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 PFDN4Q9NQP4 134 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 VPS54Q9P1Q0 977 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 GGT7Q9UJ14 662 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 SALL4Q9UJQ4 1053 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 SSX2IPQ9Y2D8 614 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 UTP11Q9Y3A2 253 aaKnown RBP12.23□□□□□ -0.45
SPIDR-211ENST00000519401 NID2Q14112 1375 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 C10orf71Q711Q0 1435 aa12.23□□□□□ -0.45
SPIDR-211ENST00000519401 A0A087X0B3 334 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 MATN2O00339 956 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 MYL6BP14649 208 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 PTPN4P29074 926 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 ATP5DP30049 168 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 ANTXR2P58335 489 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 MAP3K10Q02779 954 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 TFCP2Q12800 502 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 GRM2Q14416 872 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 NTRK3Q16288 839 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 WDR72Q3MJ13 1102 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 OLFML2BQ68BL8 750 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 NEPROQ6NW34 567 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 VSIG1Q86XK7 387 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 ECHDC2Q86YB7 292 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 ZBED8Q8IZ13 594 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 TTC8Q8TAM2 541 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 XAGE3Q8WTP9 111 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 ABTB1Q969K4 478 aaPredicted RBP12.22□□□□□ -0.45
SPIDR-211ENST00000519401 SLC7A6OSQ96CW6 309 aaPredicted RBP12.22□□□□□ -0.45
SPIDR-211ENST00000519401 ZMAT2Q96NC0 199 aaKnown RBP12.22□□□□□ -0.45
SPIDR-211ENST00000519401 MYD88Q99836 296 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 TUBGCP2Q9BSJ2 902 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 ZMYND12Q9H0C1 365 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 GPHNQ9NQX3 736 aaPredicted RBP12.22□□□□□ -0.45
SPIDR-211ENST00000519401 SAR1AQ9NR31 198 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.22□□□□□ -0.454e-7■■■■■ 38.1
SPIDR-211ENST00000519401 QPCTLQ9NXS2 382 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 DNAJB4Q9UDY4 337 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 ANGEL1Q9UNK9 670 aaKnown RBP12.22□□□□□ -0.45
SPIDR-211ENST00000519401 XDHP47989 1333 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 PGRMC1O00264 195 aaKnown RBP12.22□□□□□ -0.45
SPIDR-211ENST00000519401 PALMO75781 387 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 CCT8P50990 548 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 ARPC4P59998 168 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 ZC2HC1CQ53FD0 456 aaPredicted RBP12.22□□□□□ -0.45
SPIDR-211ENST00000519401 SH3D19Q5HYK7 790 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 TYW1BQ6NUM6 668 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 ACAD11Q709F0 780 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 USP49Q70CQ1 688 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 HS2ST1Q7LGA3 356 aa12.22□□□□□ -0.45
SPIDR-211ENST00000519401 RALYLQ86SE5 291 aaKnown RBP12.22□□□□□ -0.45
SPIDR-211ENST00000519401 DAAM2Q86T65 1068 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms