RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 MOGSQ13724 837 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 LRRC55Q6ZSA7 311 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 ANKLE2Q86XL3 938 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 RIBC1Q8N443 379 aaPredicted RBP14.56□□□□□ -0.08
PABPC1-208ENST00000519004 ARHGEF1Q92888 912 aaKnown RBP14.56□□□□□ -0.08
PABPC1-208ENST00000519004 C7orf25Q9BPX7 421 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 STX18Q9P2W9 335 aaKnown RBP14.56□□□□□ -0.08
PABPC1-208ENST00000519004 DIP2BQ9P265 1576 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 NPHP3-ACAD11A0A0J9YXS1 232 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 FAM196BA6NMK8 535 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 DDX3XO00571 662 aaKnown RBP eCLIP14.56□□□□□ -0.084e-56■■□□□ 12.8
PABPC1-208ENST00000519004 ATP9BO43861 1147 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 PDE6AP16499 860 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 ASIC2Q16515 512 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 C10orf76Q5T2E6 689 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 TSHZ1Q6ZSZ6 1077 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 IP6K1Q92551 441 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 KCNN1Q92952 543 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 MPP4Q96JB8 637 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 CADM1Q9BY67 442 aaKnown RBP14.56□□□□□ -0.08
PABPC1-208ENST00000519004 TANGO6Q9C0B7 1094 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 INIPQ9NRY2 104 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 STARD13Q9Y3M8 1113 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 LTN1O94822 1766 aa14.56□□□□□ -0.08
PABPC1-208ENST00000519004 IDH1O75874 414 aaKnown RBP14.55□□□□□ -0.08
PABPC1-208ENST00000519004 RARGP13631 454 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 UBA7P41226 1012 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 RPL21P46778 160 aaKnown RBP14.55□□□□□ -0.08
PABPC1-208ENST00000519004 DHX34Q14147 1143 aaKnown RBP14.55□□□□□ -0.08
PABPC1-208ENST00000519004 PPP2R5BQ15173 497 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 SEC23AQ15436 765 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 SLC4A8Q2Y0W8 1093 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 DCAF12L1Q5VU92 463 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 ZNF790Q6PG37 636 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 DTHD1Q6ZMT9 781 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 DTX3LQ8TDB6 740 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 LRRC59Q96AG4 307 aaKnown RBP14.55□□□□□ -0.08
PABPC1-208ENST00000519004 DYDC2Q96IM9 177 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 CATSPER2Q96P56 530 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.55□□□□□ -0.084e-12■□□□□ 10.7
PABPC1-208ENST00000519004 FLT1P17948 1338 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 UMODL1Q5DID0 1318 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 DCTN3O75935 186 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 BRAFP15056 766 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 PLCG1P19174 1290 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 MAPK7Q13164 816 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 ZNF568Q3ZCX4 644 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 CNNM4Q6P4Q7 775 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 LRRC43Q8N309 656 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 ABTB1Q969K4 478 aaPredicted RBP14.55□□□□□ -0.08
PABPC1-208ENST00000519004 TMEM60Q9H2L4 133 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 MAGEF1Q9HAY2 307 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 ZNF212Q9UDV6 495 aa14.55□□□□□ -0.08
PABPC1-208ENST00000519004 RTL9Q8NET4 1388 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 SERPINB3P29508 390 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 GRIA2P42262 883 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 PTGIRP43119 386 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 PTK2Q05397 1052 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 SPDYAQ5MJ70 313 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 KLC3Q6P597 504 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 ZNF571Q7Z3V5 609 aaPredicted RBP14.54□□□□□ -0.08
PABPC1-208ENST00000519004 ADAT2Q7Z6V5 191 aaKnown RBP14.54□□□□□ -0.08
PABPC1-208ENST00000519004 SNRNP27Q8WVK2 155 aaKnown RBP14.54□□□□□ -0.08
PABPC1-208ENST00000519004 IRGQQ8WZA9 623 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 SERPINB12Q96P63 405 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 BRD8Q9H0E9 1235 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 MTRF1LQ9UGC7 380 aaKnown RBP14.54□□□□□ -0.08
PABPC1-208ENST00000519004 ARMCX3Q9UH62 379 aaPredicted RBP14.54□□□□□ -0.08
PABPC1-208ENST00000519004 TJP1Q07157 1748 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 BCORQ6W2J9 1755 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 FGFR1OPO95684 399 aaKnown RBP14.54□□□□□ -0.08
PABPC1-208ENST00000519004 POTEJP0CG39 1038 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 CD97P48960 835 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 OXCT1P55809 520 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 CDR2Q01850 454 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 PPP2R5EQ16537 467 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 TCERG1LQ5VWI1 586 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 NME8Q8N427 588 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 SPIRE2Q8WWL2 714 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 DNAJC1Q96KC8 554 aaKnown RBP14.54□□□□□ -0.08
PABPC1-208ENST00000519004 TMEM98Q9Y2Y6 226 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 WASF2Q9Y6W5 498 aa14.54□□□□□ -0.08
PABPC1-208ENST00000519004 RGPD8O14715 1765 aaPredicted RBP14.54□□□□□ -0.08
PABPC1-208ENST00000519004 DDX3YO15523 660 aaKnown RBP14.53□□□□□ -0.08
PABPC1-208ENST00000519004 GPSM2P81274 684 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 R3HDM1Q15032 1099 aaKnown RBP14.53□□□□□ -0.08
PABPC1-208ENST00000519004 ZCWPW2Q504Y3 356 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 TAF1BQ53T94 588 aaPredicted RBP14.53□□□□□ -0.08
PABPC1-208ENST00000519004 MFSD4BQ5TF39 518 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 CYP4X1Q8N118 509 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 HAUS1Q96CS2 278 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 SYNCQ9H7C4 482 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 NAGPAQ9UK23 515 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 PCDHA3Q9Y5H8 950 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 TNKSO95271 1327 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 C1orf167Q5SNV9 1468 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 PLSCR1O15162 318 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 RNASEH1O60930 286 aaKnown RBP14.53□□□□□ -0.08
PABPC1-208ENST00000519004 ATP5DP30049 168 aa14.53□□□□□ -0.08
PABPC1-208ENST00000519004 STRN3Q13033 797 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms