RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 KMT5AQ9NQR1 393 aa23.17■■□□□ 1.3
TOP1MT-206ENST00000518951 TRAK2O60296 914 aa23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 RPS6KA5O75582 802 aa23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 PARNO95453 639 aaKnown RBP23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 ACRP10323 421 aa23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 NMT1P30419 496 aaKnown RBP23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 RFC2P35250 354 aa23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 MBTD1Q05BQ5 628 aa23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 EHHADHQ08426 723 aa23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 PLEKHG4Q58EX7 1191 aa23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 HERC4Q5GLZ8 1057 aaPredicted RBP23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 TSHZ1Q6ZSZ6 1077 aa23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 SRGAP1Q7Z6B7 1085 aa23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 CCDC65Q8IXS2 484 aa23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 DEPTORQ8TB45 409 aa23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 FGFBP2Q9BYJ0 223 aa23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 TBC1D7Q9P0N9 293 aa23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 ARHGAP28Q9P2N2 729 aa23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 PADI3Q9ULW8 664 aa23.16■■□□□ 1.3
TOP1MT-206ENST00000518951 PVALEFA0A1B0GWK0 134 aa23.15■■□□□ 1.3
TOP1MT-206ENST00000518951 EDN1P05305 212 aa23.15■■□□□ 1.3
TOP1MT-206ENST00000518951 MYL1P05976 194 aa23.15■■□□□ 1.3
TOP1MT-206ENST00000518951 GAP43P17677 238 aa23.15■■□□□ 1.3
TOP1MT-206ENST00000518951 NCKAP1LP55160 1127 aa23.15■■□□□ 1.3
TOP1MT-206ENST00000518951 FPGSQ05932 587 aa23.15■■□□□ 1.3
TOP1MT-206ENST00000518951 TAS1R3Q7RTX0 852 aa23.15■■□□□ 1.3
TOP1MT-206ENST00000518951 ELOA2Q8IYF1 753 aaPredicted RBP23.15■■□□□ 1.3
TOP1MT-206ENST00000518951 TMEM161BQ8NDZ6 487 aa23.15■■□□□ 1.3
TOP1MT-206ENST00000518951 DBF4BQ8NFT6 615 aa23.15■■□□□ 1.3
TOP1MT-206ENST00000518951 CCDC113Q9H0I3 377 aa23.15■■□□□ 1.3
TOP1MT-206ENST00000518951 ERVK-5Q9HDB9 667 aa23.15■■□□□ 1.3
TOP1MT-206ENST00000518951 IL23AQ9NPF7 189 aa23.15■■□□□ 1.3
TOP1MT-206ENST00000518951 ST3GAL5Q9UNP4 418 aa23.15■■□□□ 1.3
TOP1MT-206ENST00000518951 MAGEA10P43363 369 aaPredicted RBP23.14■■□□□ 1.29
TOP1MT-206ENST00000518951 CAMK4Q16566 473 aa23.14■■□□□ 1.29
TOP1MT-206ENST00000518951 KMT5BQ4FZB7 885 aa23.14■■□□□ 1.29
TOP1MT-206ENST00000518951 FAM178BQ8IXR5 827 aa23.14■■□□□ 1.29
TOP1MT-206ENST00000518951 USP38Q8NB14 1042 aa23.14■■□□□ 1.29
TOP1MT-206ENST00000518951 LBHD1Q9BQE6 289 aaPredicted RBP23.14■■□□□ 1.29
TOP1MT-206ENST00000518951 INO80BQ9C086 356 aaPredicted RBP23.14■■□□□ 1.29
TOP1MT-206ENST00000518951 USP20Q9Y2K6 914 aa23.14■■□□□ 1.29
TOP1MT-206ENST00000518951 INO80B-WBP1J3KQ70 363 aa23.13■■□□□ 1.29
TOP1MT-206ENST00000518951 RPN1P04843 607 aaKnown RBP23.13■■□□□ 1.29
TOP1MT-206ENST00000518951 SMTNP53814 917 aa23.13■■□□□ 1.29
TOP1MT-206ENST00000518951 NFX1Q12986 1120 aaKnown RBP23.13■■□□□ 1.29
TOP1MT-206ENST00000518951 PPIGQ13427 754 aaKnown RBP eCLIP23.13■■□□□ 1.293e-6■□□□□ 9
TOP1MT-206ENST00000518951 AMHR2Q16671 573 aa23.13■■□□□ 1.29
TOP1MT-206ENST00000518951 HAUS6Q7Z4H7 955 aa23.13■■□□□ 1.29
TOP1MT-206ENST00000518951 ZBTB8OSQ8IWT0 167 aa23.13■■□□□ 1.29
TOP1MT-206ENST00000518951 GLIS3Q8NEA6 775 aa23.13■■□□□ 1.29
TOP1MT-206ENST00000518951 IFIH1Q9BYX4 1025 aaKnown RBP23.13■■□□□ 1.29
TOP1MT-206ENST00000518951 C2orf40Q9H1Z8 148 aa23.13■■□□□ 1.29
TOP1MT-206ENST00000518951 TMX1Q9H3N1 280 aa23.13■■□□□ 1.29
TOP1MT-206ENST00000518951 FZD8Q9H461 694 aa23.13■■□□□ 1.29
TOP1MT-206ENST00000518951 OLFML3Q9NRN5 406 aa23.13■■□□□ 1.29
TOP1MT-206ENST00000518951 SEL1LQ9UBV2 794 aa23.13■■□□□ 1.29
TOP1MT-206ENST00000518951 TTLL13PA6NNM8 815 aa23.12■■□□□ 1.29
TOP1MT-206ENST00000518951 MAPTP10636 758 aaKnown RBP23.12■■□□□ 1.29
TOP1MT-206ENST00000518951 CASP5P51878 434 aa23.12■■□□□ 1.29
TOP1MT-206ENST00000518951 PAK2Q13177 524 aa23.12■■□□□ 1.29
TOP1MT-206ENST00000518951 ZC2HC1CQ53FD0 456 aaPredicted RBP23.12■■□□□ 1.29
TOP1MT-206ENST00000518951 CATSPER4Q7RTX7 472 aa23.12■■□□□ 1.29
TOP1MT-206ENST00000518951 ZNF720Q7Z2F6 126 aa23.12■■□□□ 1.29
TOP1MT-206ENST00000518951 CCDC34Q96HJ3 373 aa23.12■■□□□ 1.29
TOP1MT-206ENST00000518951 CLSTN2Q9H4D0 955 aa23.12■■□□□ 1.29
TOP1MT-206ENST00000518951 TMEM134Q9H6X4 195 aa23.12■■□□□ 1.29
TOP1MT-206ENST00000518951 PCDHA5Q9Y5H7 936 aa23.12■■□□□ 1.29
TOP1MT-206ENST00000518951 MICAL3Q7RTP6 2002 aa23.12■■□□□ 1.29
TOP1MT-206ENST00000518951 DENND3A2RUS2 1198 aa23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 K7ENM7 598 aa23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 RPUSD2Q8IZ73 545 aaKnown RBP23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 SPATA20Q8TB22 786 aa23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 STRA6Q9BX79 667 aa23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 MRPL44Q9H9J2 332 aaKnown RBP23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 KCNG1Q9UIX4 513 aa23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 K7ERI5 159 aa23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 GPR182O15218 404 aa23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 B4GALT5O43286 388 aa23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 MGEA5O60502 916 aa23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 TSPAN1O60635 241 aa23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 PPP1R37O75864 691 aa23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 PRKCBP05771 671 aa23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 MYBP10242 640 aa23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 SFPQP23246 707 aaKnown RBP eCLIP23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 EFNA5P52803 228 aa23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 FAM26FQ5R3K3 315 aa23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 RTN4RL1Q86UN2 441 aaPredicted RBP23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 SEPT8Q92599 483 aa23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 ST6GALNAC4Q9H4F1 302 aa23.11■■□□□ 1.29
TOP1MT-206ENST00000518951 MBD3O95983 291 aa23.1■■□□□ 1.29
TOP1MT-206ENST00000518951 HOXA11P31270 313 aaPredicted RBP23.1■■□□□ 1.29
TOP1MT-206ENST00000518951 SARSP49591 514 aaKnown RBP23.1■■□□□ 1.29
TOP1MT-206ENST00000518951 GTF2BQ00403 316 aa23.1■■□□□ 1.29
TOP1MT-206ENST00000518951 STK4Q13043 487 aa23.1■■□□□ 1.29
TOP1MT-206ENST00000518951 MAPK6Q16659 721 aa23.1■■□□□ 1.29
TOP1MT-206ENST00000518951 FAM187BQ17R55 369 aa23.1■■□□□ 1.29
TOP1MT-206ENST00000518951 TMEM240Q5SV17 173 aa23.1■■□□□ 1.29
TOP1MT-206ENST00000518951 CNKSR3Q6P9H4 555 aa23.1■■□□□ 1.29
TOP1MT-206ENST00000518951 PPP4R3CPQ6ZMV5 832 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms