RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 TRIM49CP0CI26 452 aa25.53■■□□□ 1.68
SLIT3-204ENST00000518140 SMPD1P17405 629 aa25.53■■□□□ 1.68
SLIT3-204ENST00000518140 RFC5P40937 340 aa25.53■■□□□ 1.68
SLIT3-204ENST00000518140 GRM1Q13255 1194 aa25.53■■□□□ 1.68
SLIT3-204ENST00000518140 MKRN4PQ13434 485 aaPredicted RBP25.53■■□□□ 1.68
SLIT3-204ENST00000518140 MYBPC2Q14324 1141 aa25.53■■□□□ 1.68
SLIT3-204ENST00000518140 MEA1Q16626 185 aa25.53■■□□□ 1.68
SLIT3-204ENST00000518140 RRAGAQ7L523 313 aa25.53■■□□□ 1.68
SLIT3-204ENST00000518140 ZCCHC17Q9NP64 241 aaKnown RBP25.53■■□□□ 1.68
SLIT3-204ENST00000518140 FLRT1Q9NZU1 646 aa25.53■■□□□ 1.68
SLIT3-204ENST00000518140 ADCY6O43306 1168 aa25.52■■□□□ 1.68
SLIT3-204ENST00000518140 PPP2R3AQ06190 1150 aa25.52■■□□□ 1.68
SLIT3-204ENST00000518140 ACVR2BQ13705 512 aa25.52■■□□□ 1.68
SLIT3-204ENST00000518140 ACRBPQ8NEB7 543 aa25.52■■□□□ 1.68
SLIT3-204ENST00000518140 ZNF397Q8NF99 534 aaPredicted RBP25.52■■□□□ 1.68
SLIT3-204ENST00000518140 TMEM174Q8WUU8 243 aa25.52■■□□□ 1.68
SLIT3-204ENST00000518140 FAM167AQ96KS9 214 aa25.52■■□□□ 1.68
SLIT3-204ENST00000518140 SMARCAD1Q9H4L7 1026 aa25.52■■□□□ 1.68
SLIT3-204ENST00000518140 DLG4P78352 724 aa25.52■■□□□ 1.68
SLIT3-204ENST00000518140 TSR1Q2NL82 804 aaKnown RBP25.52■■□□□ 1.68
SLIT3-204ENST00000518140 HVCN1Q96D96 273 aa25.52■■□□□ 1.68
SLIT3-204ENST00000518140 SUGCTQ9HAC7 445 aa25.52■■□□□ 1.68
SLIT3-204ENST00000518140 ZHX1Q9UKY1 873 aaPredicted RBP25.52■■□□□ 1.68
SLIT3-204ENST00000518140 EXOC7Q9UPT5 735 aa25.52■■□□□ 1.68
SLIT3-204ENST00000518140 LRRC53A6NM62 1247 aa25.51■■□□□ 1.67
SLIT3-204ENST00000518140 PON1P27169 355 aa25.51■■□□□ 1.67
SLIT3-204ENST00000518140 POLR2FP61218 127 aaKnown RBP25.51■■□□□ 1.67
SLIT3-204ENST00000518140 MAP2K5Q13163 448 aa25.51■■□□□ 1.67
SLIT3-204ENST00000518140 CRHR2Q13324 411 aa25.51■■□□□ 1.67
SLIT3-204ENST00000518140 XXYLT1Q8NBI6 393 aa25.51■■□□□ 1.67
SLIT3-204ENST00000518140 ANKRD7Q92527 254 aa25.51■■□□□ 1.67
SLIT3-204ENST00000518140 SAAL1Q96ER3 474 aa25.51■■□□□ 1.67
SLIT3-204ENST00000518140 CGNQ9P2M7 1197 aaKnown RBP25.51■■□□□ 1.67
SLIT3-204ENST00000518140 LRRIQ4A6NIV6 560 aa25.51■■□□□ 1.67
SLIT3-204ENST00000518140 ZSCAN12O43309 604 aa25.51■■□□□ 1.67
SLIT3-204ENST00000518140 INHBEP58166 350 aa25.51■■□□□ 1.67
SLIT3-204ENST00000518140 LRRC71Q8N4P6 559 aa25.51■■□□□ 1.67
SLIT3-204ENST00000518140 PLEKHO2Q8TD55 490 aa25.51■■□□□ 1.67
SLIT3-204ENST00000518140 PRPF31Q8WWY3 499 aaKnown RBP25.51■■□□□ 1.67
SLIT3-204ENST00000518140 IQCDQ96DY2 449 aa25.51■■□□□ 1.67
SLIT3-204ENST00000518140 ARID3AQ99856 593 aa25.51■■□□□ 1.67
SLIT3-204ENST00000518140 GANQ9H2C0 597 aa25.51■■□□□ 1.67
SLIT3-204ENST00000518140 TRPC6Q9Y210 931 aa25.51■■□□□ 1.67
SLIT3-204ENST00000518140 PAXBP1Q9Y5B6 917 aa25.51■■□□□ 1.67
SLIT3-204ENST00000518140 LGALS2P05162 132 aa25.5■■□□□ 1.67
SLIT3-204ENST00000518140 PLEKP08567 350 aaPredicted RBP25.5■■□□□ 1.67
SLIT3-204ENST00000518140 BFSP1Q12934 665 aa25.5■■□□□ 1.67
SLIT3-204ENST00000518140 CCL14Q16627 93 aa25.5■■□□□ 1.67
SLIT3-204ENST00000518140 CBWD6Q4V339 395 aa25.5■■□□□ 1.67
SLIT3-204ENST00000518140 CBWD3Q5JTY5 395 aa25.5■■□□□ 1.67
SLIT3-204ENST00000518140 CBWD5Q5RIA9 395 aa25.5■■□□□ 1.67
SLIT3-204ENST00000518140 ABHD16BQ9H3Z7 469 aa25.5■■□□□ 1.67
SLIT3-204ENST00000518140 PLAGL2Q9UPG8 496 aa25.5■■□□□ 1.67
SLIT3-204ENST00000518140 CAPSQ13938 189 aa25.49■■□□□ 1.67
SLIT3-204ENST00000518140 EXOC3L4Q17RC7 722 aa25.49■■□□□ 1.67
SLIT3-204ENST00000518140 PDXDC1Q6P996 788 aa25.49■■□□□ 1.67
SLIT3-204ENST00000518140 CACNA2D4Q7Z3S7 1137 aa25.49■■□□□ 1.67
SLIT3-204ENST00000518140 CBWD2Q8IUF1 395 aa25.49■■□□□ 1.67
SLIT3-204ENST00000518140 PPTC7Q8NI37 304 aa25.49■■□□□ 1.67
SLIT3-204ENST00000518140 ZNF592Q92610 1267 aa25.49■■□□□ 1.67
SLIT3-204ENST00000518140 CCDC102AQ96A19 550 aa25.49■■□□□ 1.67
SLIT3-204ENST00000518140 EPN1Q9Y6I3 576 aaPredicted RBP25.49■■□□□ 1.67
SLIT3-204ENST00000518140 ADRB2P07550 413 aa25.49■■□□□ 1.67
SLIT3-204ENST00000518140 ZNF286BP0CG31 522 aa25.49■■□□□ 1.67
SLIT3-204ENST00000518140 HNRNPH3P31942 346 aaKnown RBP25.49■■□□□ 1.67
SLIT3-204ENST00000518140 NAMPTP43490 491 aa25.49■■□□□ 1.67
SLIT3-204ENST00000518140 FMO5P49326 533 aa25.49■■□□□ 1.67
SLIT3-204ENST00000518140 SNRPFP62306 86 aaKnown RBP25.49■■□□□ 1.67
SLIT3-204ENST00000518140 EMID1Q96A84 441 aaPredicted RBP25.49■■□□□ 1.67
SLIT3-204ENST00000518140 CEP72Q9P209 647 aa25.49■■□□□ 1.67
SLIT3-204ENST00000518140 REXO2Q9Y3B8 237 aaKnown RBP25.49■■□□□ 1.67
SLIT3-204ENST00000518140 EDN1P05305 212 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 CCDC175P0C221 793 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 CTGFP29279 349 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 DUSP28Q4G0W2 176 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 C1orf220Q5T0J3 134 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 TRIM65Q6PJ69 517 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 DEPTORQ8TB45 409 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 USP6NLQ92738 828 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 EDEM3Q9BZQ6 932 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 NHEJ1Q9H9Q4 299 aaPredicted RBP25.48■■□□□ 1.67
SLIT3-204ENST00000518140 ZFYVE28Q9HCC9 887 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 SIX2Q9NPC8 291 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 ZNHIT6Q9NWK9 470 aaKnown RBP25.48■■□□□ 1.67
SLIT3-204ENST00000518140 IGKV6-21A0A0C4DH24 114 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 HNRNPDLO14979 420 aaKnown RBP25.48■■□□□ 1.67
SLIT3-204ENST00000518140 CCP110O43303 1012 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 NDUFA10O95299 355 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 ABL1P00519 1130 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 SLC26A2P50443 739 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 PPP2R5AQ15172 486 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 GBP6Q6ZN66 633 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 ERAP1Q9NZ08 941 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 ARHGAP20Q9P2F6 1191 aa25.48■■□□□ 1.67
SLIT3-204ENST00000518140 GJB1P08034 283 aa25.47■■□□□ 1.67
SLIT3-204ENST00000518140 CYP2B6P20813 491 aa25.47■■□□□ 1.67
SLIT3-204ENST00000518140 BRDTQ58F21 947 aaPredicted RBP25.47■■□□□ 1.67
SLIT3-204ENST00000518140 KLHDC7AQ5VTJ3 777 aa25.47■■□□□ 1.67
SLIT3-204ENST00000518140 PDCL2Q8N4E4 241 aa25.47■■□□□ 1.67
SLIT3-204ENST00000518140 SMC1BQ8NDV3 1235 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms