RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 TCF25Q9BQ70 676 aa11.78□□□□□ -0.52
SPIDR-205ENST00000518060 GBP3Q9H0R5 595 aa11.78□□□□□ -0.52
SPIDR-205ENST00000518060 FOXP1Q9H334 677 aaPredicted RBP11.78□□□□□ -0.52
SPIDR-205ENST00000518060 CWH43Q9H720 699 aa11.78□□□□□ -0.52
SPIDR-205ENST00000518060 AGPAT5Q9NUQ2 364 aa11.78□□□□□ -0.52
SPIDR-205ENST00000518060 FAM105AQ9NUU6 356 aa11.78□□□□□ -0.52
SPIDR-205ENST00000518060 MYO7AQ13402 2215 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 GRXCR2A6NFK2 248 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 PER2O15055 1255 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 ZC3H11AO75152 810 aaKnown RBP eCLIP11.77□□□□□ -0.53
SPIDR-205ENST00000518060 TBX10O75333 385 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 DGAT1O75907 488 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 ATF7P17544 494 aaPredicted RBP11.77□□□□□ -0.53
SPIDR-205ENST00000518060 RAB27AP51159 221 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 DLX2Q07687 328 aaPredicted RBP11.77□□□□□ -0.53
SPIDR-205ENST00000518060 NCBP1Q09161 790 aaKnown RBP11.77□□□□□ -0.53
SPIDR-205ENST00000518060 NBR1Q14596 966 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 MCTP1Q6DN14 999 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 TMC7Q7Z402 723 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 ZNF598Q86UK7 904 aaKnown RBP11.77□□□□□ -0.53
SPIDR-205ENST00000518060 FERMT3Q86UX7 667 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 TMEM87AQ8NBN3 555 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 FBXO18Q8NFZ0 1043 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 URGCPQ8TCY9 931 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 ASAP3Q8TDY4 903 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 MRPS27Q92552 414 aaKnown RBP11.77□□□□□ -0.53
SPIDR-205ENST00000518060 PGBD4Q96DM1 585 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 MTMR9Q96QG7 549 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 HSD17B14Q9BPX1 270 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 POLR3FQ9H1D9 316 aaPredicted RBP11.77□□□□□ -0.53
SPIDR-205ENST00000518060 IFT122Q9HBG6 1241 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 ANKEF1Q9NU02 776 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 SPG21Q9NZD8 308 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 CD207Q9UJ71 328 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 BARX2Q9UMQ3 279 aaPredicted RBP11.77□□□□□ -0.53
SPIDR-205ENST00000518060 KIF3AQ9Y496 699 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 PCDHB2Q9Y5E7 798 aa11.77□□□□□ -0.53
SPIDR-205ENST00000518060 NT5C1B-RDH14C9J2C7 533 aa11.76□□□□□ -0.53
SPIDR-205ENST00000518060 ASAP2O43150 1006 aa11.76□□□□□ -0.53
SPIDR-205ENST00000518060 LYPLA2O95372 231 aa11.76□□□□□ -0.53
SPIDR-205ENST00000518060 ALDH7A1P49419 539 aaKnown RBP11.76□□□□□ -0.53
SPIDR-205ENST00000518060 RARRES1P49788 294 aa11.76□□□□□ -0.53
SPIDR-205ENST00000518060 BCAR1P56945 870 aa11.76□□□□□ -0.53
SPIDR-205ENST00000518060 ERVFC1P60507 584 aa11.76□□□□□ -0.53
SPIDR-205ENST00000518060 SMAD4Q13485 552 aaKnown RBP11.76□□□□□ -0.53
SPIDR-205ENST00000518060 MXD4Q14582 209 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-205ENST00000518060 TMEM132AQ24JP5 1023 aa11.76□□□□□ -0.53
SPIDR-205ENST00000518060 NOMO2Q5JPE7 1267 aa11.76□□□□□ -0.53
SPIDR-205ENST00000518060 LLGL2Q6P1M3 1020 aa11.76□□□□□ -0.53
SPIDR-205ENST00000518060 POTEGQ6S5H5 508 aa11.76□□□□□ -0.53
SPIDR-205ENST00000518060 GJD3Q8N144 294 aa11.76□□□□□ -0.53
SPIDR-205ENST00000518060 EFHBQ8N7U6 833 aa11.76□□□□□ -0.53
SPIDR-205ENST00000518060 TMEM169Q96HH4 297 aa11.76□□□□□ -0.53
SPIDR-205ENST00000518060 APOL6Q9BWW8 343 aa11.76□□□□□ -0.53
SPIDR-205ENST00000518060 MINDY3Q9H8M7 445 aa11.76□□□□□ -0.53
SPIDR-205ENST00000518060 XPNPEP1Q9NQW7 623 aa11.76□□□□□ -0.53
SPIDR-205ENST00000518060 KIAA1671Q9BY89 1806 aa11.76□□□□□ -0.53
SPIDR-205ENST00000518060 ARHGEF35A5YM69 484 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 LRRIQ4A6NIV6 560 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 MEIS3P2A8K0S8 358 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 H3BQV1 296 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 MED24O75448 989 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 SRGAP2BP0DMP2 458 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 LIG1P18858 919 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 LTBRP36941 435 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 CCT6AP40227 531 aaKnown RBP11.75□□□□□ -0.53
SPIDR-205ENST00000518060 ORC2Q13416 577 aaPredicted RBP11.75□□□□□ -0.53
SPIDR-205ENST00000518060 CAPSQ13938 189 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 BMS1Q14692 1282 aaKnown RBP11.75□□□□□ -0.53
SPIDR-205ENST00000518060 COL19A1Q14993 1142 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 CTC1Q2NKJ3 1217 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 HAUS3Q68CZ6 603 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 FAM178BQ8IXR5 827 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 SLC39A11Q8N1S5 342 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 CPB2Q96IY4 423 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 FAM193BQ96PV7 902 aaPredicted RBP11.75□□□□□ -0.53
SPIDR-205ENST00000518060 TRIM6Q9C030 488 aaPredicted RBP11.75□□□□□ -0.53
SPIDR-205ENST00000518060 RSAD1Q9HA92 442 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 TUFT1Q9NNX1 390 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 GPRC5CQ9NQ84 441 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 LZTS1Q9Y250 596 aa11.75□□□□□ -0.53
SPIDR-205ENST00000518060 WDR81Q562E7 1941 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 MBTPS2O43462 519 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 TSPAN1O60635 241 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 ITGA4P13612 1032 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 GLRA2P23416 452 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 TRAPPC10P48553 1259 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 PTENP60484 403 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 RBM10P98175 930 aaKnown RBP11.74□□□□□ -0.53
SPIDR-205ENST00000518060 PLCB3Q01970 1234 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 ADAM15Q13444 863 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 SMC1AQ14683 1233 aaKnown RBP11.74□□□□□ -0.53
SPIDR-205ENST00000518060 DUSP6Q16828 381 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 PDE12Q6L8Q7 609 aaKnown RBP11.74□□□□□ -0.53
SPIDR-205ENST00000518060 NOTUMQ6P988 496 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 CATSPER3Q86XQ3 398 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 MCPH1Q8NEM0 835 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 TMX3Q96JJ7 454 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 NACC1Q96RE7 527 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 CDCA3Q99618 268 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms