RNA–Protein interactions for RNA: ENST00000517709.1

MCM4-202, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-202ENST00000517709 B4GALT5O43286 388 aa13.2□□□□□ -0.3
MCM4-202ENST00000517709 TSPAN1O60635 241 aa13.2□□□□□ -0.3
MCM4-202ENST00000517709 GLP2RO95838 553 aa13.2□□□□□ -0.3
MCM4-202ENST00000517709 ZSCAN20P17040 1043 aaPredicted RBP13.2□□□□□ -0.3
MCM4-202ENST00000517709 TRAPPC10P48553 1259 aa13.2□□□□□ -0.3
MCM4-202ENST00000517709 MBTD1Q05BQ5 628 aa13.2□□□□□ -0.3
MCM4-202ENST00000517709 PTGDRQ13258 359 aa13.2□□□□□ -0.3
MCM4-202ENST00000517709 GNL2Q13823 731 aaKnown RBP13.2□□□□□ -0.3
MCM4-202ENST00000517709 TWF2Q6IBS0 349 aaKnown RBP13.2□□□□□ -0.3
MCM4-202ENST00000517709 LRRC43Q8N309 656 aa13.2□□□□□ -0.3
MCM4-202ENST00000517709 VN1R2Q8NFZ6 395 aa13.2□□□□□ -0.3
MCM4-202ENST00000517709 KHSRPQ92945 711 aaKnown RBP eCLIP13.2□□□□□ -0.3
MCM4-202ENST00000517709 JPH2Q9BR39 696 aaPredicted RBP13.2□□□□□ -0.3
MCM4-202ENST00000517709 MMTAG2Q9BU76 263 aaKnown RBP13.2□□□□□ -0.3
MCM4-202ENST00000517709 POLR3CQ9BUI4 534 aaPredicted RBP13.2□□□□□ -0.3
MCM4-202ENST00000517709 EIF2AQ9BY44 585 aaKnown RBP13.2□□□□□ -0.3
MCM4-202ENST00000517709 BACH2Q9BYV9 841 aa13.2□□□□□ -0.3
MCM4-202ENST00000517709 LMAN2LQ9H0V9 348 aa13.2□□□□□ -0.3
MCM4-202ENST00000517709 POLD4Q9HCU8 107 aa13.2□□□□□ -0.3
MCM4-202ENST00000517709 TUFT1Q9NNX1 390 aa13.2□□□□□ -0.3
MCM4-202ENST00000517709 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.2□□□□□ -0.3
MCM4-202ENST00000517709 COG5Q9UP83 839 aa13.2□□□□□ -0.3
MCM4-202ENST00000517709 PPME1Q9Y570 386 aa13.2□□□□□ -0.3
MCM4-202ENST00000517709 FGF18O76093 207 aa13.19□□□□□ -0.3
MCM4-202ENST00000517709 CDC25AP30304 524 aa13.19□□□□□ -0.3
MCM4-202ENST00000517709 FXR2P51116 673 aaKnown RBP eCLIP13.19□□□□□ -0.38e-8■■■■□ 20
MCM4-202ENST00000517709 PTENP60484 403 aa13.19□□□□□ -0.3
MCM4-202ENST00000517709 ERVFC1P60507 584 aa13.19□□□□□ -0.3
MCM4-202ENST00000517709 ORC2Q13416 577 aaPredicted RBP13.19□□□□□ -0.3
MCM4-202ENST00000517709 CLUL1Q15846 466 aa13.19□□□□□ -0.3
MCM4-202ENST00000517709 CTC1Q2NKJ3 1217 aa13.19□□□□□ -0.3
MCM4-202ENST00000517709 SPOUT1Q5T280 376 aaKnown RBP13.19□□□□□ -0.3
MCM4-202ENST00000517709 MCTP1Q6DN14 999 aa13.19□□□□□ -0.3
MCM4-202ENST00000517709 AGMOQ6ZNB7 445 aa13.19□□□□□ -0.3
MCM4-202ENST00000517709 OTUD6AQ7L8S5 288 aa13.19□□□□□ -0.3
MCM4-202ENST00000517709 KCNK18Q7Z418 384 aa13.19□□□□□ -0.3
MCM4-202ENST00000517709 CDR2LQ86X02 465 aaPredicted RBP13.19□□□□□ -0.3
MCM4-202ENST00000517709 ZNF710Q8N1W2 664 aa13.19□□□□□ -0.3
MCM4-202ENST00000517709 SMG8Q8ND04 991 aaKnown RBP13.19□□□□□ -0.3
MCM4-202ENST00000517709 PABPC5Q96DU9 382 aaKnown RBP13.19□□□□□ -0.3
MCM4-202ENST00000517709 KIFC3Q9BVG8 833 aa13.19□□□□□ -0.3
MCM4-202ENST00000517709 UPF2Q9HAU5 1272 aaKnown RBP13.19□□□□□ -0.3
MCM4-202ENST00000517709 CD320Q9NPF0 282 aa13.19□□□□□ -0.3
MCM4-202ENST00000517709 CLDND1Q9NY35 253 aa13.19□□□□□ -0.3
MCM4-202ENST00000517709 NOL7Q9UMY1 257 aaKnown RBP13.19□□□□□ -0.3
MCM4-202ENST00000517709 USP20Q9Y2K6 914 aa13.19□□□□□ -0.3
MCM4-202ENST00000517709 NCOR1O75376 2440 aa13.19□□□□□ -0.3
MCM4-202ENST00000517709 NT5C1B-RDH14C9J2C7 533 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 FSCN2O14926 492 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 GAS2O43903 313 aaKnown RBP13.18□□□□□ -0.3
MCM4-202ENST00000517709 DGAT1O75907 488 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 LAG3P18627 525 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 RPA1P27694 616 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 CUL4AQ13619 759 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 LEXMQ3ZCV2 418 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 KCNT2Q6UVM3 1135 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 SRGAP1Q7Z6B7 1085 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 IFNLR1Q8IU57 520 aaPredicted RBP13.18□□□□□ -0.3
MCM4-202ENST00000517709 THNSL1Q8IYQ7 743 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 IGSF22Q8N9C0 903 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 LRRC15Q8TF66 581 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 TCP11Q8WWU5 503 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 TRAIPQ9BWF2 469 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 VN1R3Q9BXE9 311 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 TBC1D13Q9NVG8 400 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 DNAJB4Q9UDY4 337 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 INPP5FQ9Y2H2 1132 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 HES2Q9Y543 173 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 PCDHB2Q9Y5E7 798 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 CITO14578 2027 aa13.18□□□□□ -0.3
MCM4-202ENST00000517709 TNFRSF10AO00220 468 aa13.17□□□□□ -0.3
MCM4-202ENST00000517709 OFD1O75665 1012 aa13.17□□□□□ -0.3
MCM4-202ENST00000517709 ARF4P18085 180 aaPredicted RBP13.17□□□□□ -0.3
MCM4-202ENST00000517709 CCT6AP40227 531 aaKnown RBP13.17□□□□□ -0.3
MCM4-202ENST00000517709 ATP2C1P98194 919 aaPredicted RBP13.17□□□□□ -0.3
MCM4-202ENST00000517709 PLPP4Q5VZY2 271 aa13.17□□□□□ -0.3
MCM4-202ENST00000517709 CDCA2Q69YH5 1023 aaPredicted RBP13.17□□□□□ -0.3
MCM4-202ENST00000517709 PADI6Q6TGC4 694 aa13.17□□□□□ -0.3
MCM4-202ENST00000517709 EP400NLQ6ZTU2 488 aa13.17□□□□□ -0.3
MCM4-202ENST00000517709 SLC39A11Q8N1S5 342 aa13.17□□□□□ -0.3
MCM4-202ENST00000517709 FEZF2Q8TBJ5 459 aa13.17□□□□□ -0.3
MCM4-202ENST00000517709 SNX29Q8TEQ0 813 aa13.17□□□□□ -0.3
MCM4-202ENST00000517709 SYMPKQ92797 1274 aaKnown RBP13.17□□□□□ -0.3
MCM4-202ENST00000517709 CCDC43Q96MW1 224 aaKnown RBP13.17□□□□□ -0.3
MCM4-202ENST00000517709 RNF39Q9H2S5 420 aa13.17□□□□□ -0.3
MCM4-202ENST00000517709 NXF3Q9H4D5 531 aaKnown RBP13.17□□□□□ -0.3
MCM4-202ENST00000517709 IGFLR1Q9H665 355 aa13.17□□□□□ -0.3
MCM4-202ENST00000517709 NRDE2Q9H7Z3 1164 aa13.17□□□□□ -0.3
MCM4-202ENST00000517709 TLR9Q9NR96 1032 aa13.17□□□□□ -0.3
MCM4-202ENST00000517709 CHST12Q9NRB3 414 aa13.17□□□□□ -0.3
MCM4-202ENST00000517709 DDX19AQ9NUU7 478 aaKnown RBP13.17□□□□□ -0.3
MCM4-202ENST00000517709 DACT1Q9NYF0 836 aa13.17□□□□□ -0.3
MCM4-202ENST00000517709 DBR1Q9UK59 544 aaKnown RBP13.17□□□□□ -0.3
MCM4-202ENST00000517709 BARX2Q9UMQ3 279 aaPredicted RBP13.17□□□□□ -0.3
MCM4-202ENST00000517709 HIDE1A8MVS5 230 aa13.16□□□□□ -0.3
MCM4-202ENST00000517709 E9PMD0 336 aa13.16□□□□□ -0.3
MCM4-202ENST00000517709 F8W810 466 aa13.16□□□□□ -0.3
MCM4-202ENST00000517709 INO80B-WBP1J3KQ70 363 aa13.16□□□□□ -0.3
MCM4-202ENST00000517709 PER2O15055 1255 aa13.16□□□□□ -0.3
MCM4-202ENST00000517709 HOXA2O43364 376 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms