RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.17□□□□□ -1.9
SKP1-204ENST00000517691 TMX2Q9Y320 296 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 TACC3Q9Y6A5 838 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 POLR2AP24928 1970 aaKnown RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 MAST2Q6P0Q8 1798 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 ROBO3Q96MS0 1386 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 PCNTO95613 3336 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 ZMYM6O95789 1325 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 NEDD4P46934 1319 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 KIAA1324LA8MWY0 1029 aaPredicted RBP3.16□□□□□ -1.9
SKP1-204ENST00000517691 VSTM5A8MXK1 200 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 F5H6K3 240 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 hCG_1984214I3L0E3 225 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 IFIT3O14879 490 aaKnown RBP3.16□□□□□ -1.9
SKP1-204ENST00000517691 SLC27A2O14975 620 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 TLR2O60603 784 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 NBNO60934 754 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 FKTNO75072 461 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 SIN3BO75182 1162 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 CILPO75339 1184 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 FLOT1O75955 427 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 PGRP06401 933 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 HSPA8P11142 646 aaKnown RBP3.16□□□□□ -1.9
SKP1-204ENST00000517691 VCAM1P19320 739 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 NME2P22392 152 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 HALP42357 657 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 SLC1A4P43007 532 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 PPM1FP49593 454 aaPredicted RBP3.16□□□□□ -1.9
SKP1-204ENST00000517691 GEMIN4P57678 1058 aaKnown RBP3.16□□□□□ -1.9
SKP1-204ENST00000517691 SP3Q02447 781 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 PTPN11Q06124 597 aaPredicted RBP3.16□□□□□ -1.9
SKP1-204ENST00000517691 KLRC3Q07444 240 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 PCDH1Q08174 1060 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 PIN1Q13526 163 aaPredicted RBP3.16□□□□□ -1.9
SKP1-204ENST00000517691 HLTFQ14527 1009 aaKnown RBP eCLIP3.16□□□□□ -1.9
SKP1-204ENST00000517691 PLS1Q14651 629 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 COG2Q14746 738 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 KIF22Q14807 665 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 SART3Q15020 963 aaKnown RBP3.16□□□□□ -1.9
SKP1-204ENST00000517691 CCDC178Q5BJE1 867 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 KIAA1755Q5JYT7 1200 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 PERM1Q5SV97 790 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 CEP135Q66GS9 1140 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 SLFN13Q68D06 897 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 NFXL1Q6ZNB6 911 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 CATSPERGQ6ZRH7 1159 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 CHST3Q7LGC8 479 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 DGKHQ86XP1 1220 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 TCEAL8Q8IYN2 117 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 CPXCR1Q8N123 301 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 ANKRD13CQ8N6S4 541 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 NCOA7Q8NI08 942 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 ERP27Q96DN0 273 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 MFSD3Q96ES6 412 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 NUP88Q99567 741 aaPredicted RBP3.16□□□□□ -1.9
SKP1-204ENST00000517691 YIPF4Q9BSR8 244 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 SRRTQ9BXP5 876 aaKnown RBP3.16□□□□□ -1.9
SKP1-204ENST00000517691 ASCC2Q9H1I8 757 aaPredicted RBP3.16□□□□□ -1.9
SKP1-204ENST00000517691 TNKS2Q9H2K2 1166 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 VCPKMTQ9H867 229 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 KAT14Q9H8E8 782 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 ZCCHC17Q9NP64 241 aaKnown RBP3.16□□□□□ -1.9
SKP1-204ENST00000517691 IL17RBQ9NRM6 502 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 AASDHPPTQ9NRN7 309 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 HOXC10Q9NYD6 342 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 CLIC5Q9NZA1 410 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 ZSWIM5Q9P217 1185 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 RAPGEFL1Q9UHV5 662 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 NAGPAQ9UK23 515 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 SLC45A1Q9Y2W3 748 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 IPPQ9Y573 584 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 AK9Q5TCS8 1911 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 TRPM7Q96QT4 1865 aa3.16□□□□□ -1.9
SKP1-204ENST00000517691 IGKV6D-41A0A0C4DH26 115 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 PRRT4C9JH25 899 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 TMEM232C9JQI7 657 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 PEX10O60683 326 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 NDUFB10O96000 172 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 GHRHP01286 108 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 RBP3P10745 1247 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 TOP1P11387 765 aaKnown RBP3.15□□□□□ -1.9
SKP1-204ENST00000517691 BMP4P12644 408 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 BMP3P12645 472 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 CPB1P15086 417 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 EIF2AK2P19525 551 aaKnown RBP3.15□□□□□ -1.9
SKP1-204ENST00000517691 ARNTP27540 789 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 HOXA7P31268 230 aaPredicted RBP3.15□□□□□ -1.9
SKP1-204ENST00000517691 SSTR4P31391 388 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 MCM5P33992 734 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 GIPRP48546 466 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 HERVK_113P62684 666 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 ZNF252P-AS1Q0IIN9 211 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 WTAPQ15007 396 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 ARHGEF6Q15052 776 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 NECTIN1Q15223 517 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 ALFQ53S48 1182 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 TMEM67Q5HYA8 995 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 IFIT1BQ5T764 474 aaKnown RBP3.15□□□□□ -1.9
SKP1-204ENST00000517691 FAM102BQ5T8I3 360 aa3.15□□□□□ -1.9
SKP1-204ENST00000517691 DBX2Q6ZNG2 339 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms