RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 HOXA2O43364 376 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 CYP11B2P19099 503 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 MUTP22033 750 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 DNAJB1P25685 340 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 MRPS5P82675 430 aaKnown RBP15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 POU5F1BQ06416 359 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 TCEAL5Q5H9L2 206 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 UBXN11Q5T124 520 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 IFNLR1Q8IU57 520 aaPredicted RBP15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 ABI1Q8IZP0 508 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 MCPH1Q8NEM0 835 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 SPPL3Q8TCT6 385 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 HELQQ8TDG4 1101 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 P2RX5Q93086 422 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 ASB2Q96Q27 587 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 BHMT2Q9H2M3 363 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 FAM105AQ9NUU6 356 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 DDX19AQ9NUU7 478 aaKnown RBP15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 K7ELQ4 463 aaPredicted RBP15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 TSPAN1O60635 241 aa15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 MBTD1Q05BQ5 628 aa15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 AMHR2Q16671 573 aa15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 TIGD5Q53EQ6 642 aa15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 NAALADL2Q58DX5 795 aa15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 TJAP1Q5JTD0 557 aa15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 KRT79Q5XKE5 535 aa15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 COLGALT1Q8NBJ5 622 aa15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 BSNDQ8WZ55 320 aa15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 HLA-CQ95604 372 aa15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 TTC28Q96AY4 2481 aa15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 INTS4Q96HW7 963 aaKnown RBP15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 LMAN2LQ9H0V9 348 aa15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 POLD4Q9HCU8 107 aa15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 COG5Q9UP83 839 aa15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 PCDHB2Q9Y5E7 798 aa15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 PCDHB12Q9Y5F1 795 aa15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 STK24Q9Y6E0 443 aa15.64■□□□□ 0.09
PDGFRB-202ENST00000517488 VWA3AA6NCI4 1184 aa15.63■□□□□ 0.09
PDGFRB-202ENST00000517488 LRRIQ4A6NIV6 560 aa15.63■□□□□ 0.09
PDGFRB-202ENST00000517488 E9PMD0 336 aa15.63■□□□□ 0.09
PDGFRB-202ENST00000517488 ZNF623O75123 536 aa15.63■□□□□ 0.09
PDGFRB-202ENST00000517488 ERLIN2O94905 339 aa15.63■□□□□ 0.09
PDGFRB-202ENST00000517488 SKIP12755 728 aa15.63■□□□□ 0.09
PDGFRB-202ENST00000517488 PDCP20941 246 aa15.63■□□□□ 0.09
PDGFRB-202ENST00000517488 SYT1P21579 422 aa15.63■□□□□ 0.09
PDGFRB-202ENST00000517488 KCNK18Q7Z418 384 aa15.63■□□□□ 0.09
PDGFRB-202ENST00000517488 BRAPQ7Z569 592 aa15.63■□□□□ 0.09
PDGFRB-202ENST00000517488 LRRC43Q8N309 656 aa15.63■□□□□ 0.09
PDGFRB-202ENST00000517488 POF1BQ8WVV4 589 aa15.63■□□□□ 0.09
PDGFRB-202ENST00000517488 CPB2Q96IY4 423 aa15.63■□□□□ 0.09
PDGFRB-202ENST00000517488 NFKBIZQ9BYH8 718 aa15.63■□□□□ 0.09
PDGFRB-202ENST00000517488 NSUN3Q9H649 340 aaKnown RBP15.63■□□□□ 0.09
PDGFRB-202ENST00000517488 AAASQ9NRG9 546 aa15.63■□□□□ 0.09
PDGFRB-202ENST00000517488 B4GALT5O43286 388 aa15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 FGF18O76093 207 aa15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 EYA4O95677 639 aa15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 LAG3P18627 525 aa15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 IRS1P35568 1242 aa15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 PBX3P40426 434 aa15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 RAB27AP51159 221 aa15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 KCNQ1P51787 676 aa15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 ZRSR1Q15695 479 aaKnown RBP15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 ARL6IP4Q66PJ3 421 aaKnown RBP15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 MRPL10Q7Z7H8 261 aaKnown RBP15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 THNSL1Q8IYQ7 743 aa15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 SNX21Q969T3 373 aa15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 PNMA5Q96PV4 448 aa15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 EIF2AQ9BY44 585 aaKnown RBP15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 UBE2ZQ9H832 354 aaPredicted RBP15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 DNM3Q9UQ16 869 aa15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 INPP5FQ9Y2H2 1132 aa15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 PCDHGC5Q9Y5F6 944 aa15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 BRWD1Q9NSI6 2320 aa15.62■□□□□ 0.09
PDGFRB-202ENST00000517488 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.61■□□□□ 0.09
PDGFRB-202ENST00000517488 OFD1O75665 1012 aa15.61■□□□□ 0.09
PDGFRB-202ENST00000517488 ARF4P18085 180 aaPredicted RBP15.61■□□□□ 0.09
PDGFRB-202ENST00000517488 AFF1P51825 1210 aaKnown RBP15.61■□□□□ 0.09
PDGFRB-202ENST00000517488 RESTQ13127 1097 aa15.61■□□□□ 0.09
PDGFRB-202ENST00000517488 PCBP1Q15365 356 aaKnown RBP eCLIP15.61■□□□□ 0.09
PDGFRB-202ENST00000517488 SF3A1Q15459 793 aaKnown RBP15.61■□□□□ 0.09
PDGFRB-202ENST00000517488 CDCA2Q69YH5 1023 aaPredicted RBP15.61■□□□□ 0.09
PDGFRB-202ENST00000517488 NOTUMQ6P988 496 aa15.61■□□□□ 0.09
PDGFRB-202ENST00000517488 KCNT2Q6UVM3 1135 aa15.61■□□□□ 0.09
PDGFRB-202ENST00000517488 GLB1LQ6UWU2 654 aa15.61■□□□□ 0.09
PDGFRB-202ENST00000517488 AGMOQ6ZNB7 445 aa15.61■□□□□ 0.09
PDGFRB-202ENST00000517488 SMG8Q8ND04 991 aaKnown RBP15.61■□□□□ 0.09
PDGFRB-202ENST00000517488 MTMR6Q9Y217 621 aa15.61■□□□□ 0.09
PDGFRB-202ENST00000517488 BMP1P13497 986 aa15.6■□□□□ 0.09
PDGFRB-202ENST00000517488 AXLP30530 894 aa15.6■□□□□ 0.09
PDGFRB-202ENST00000517488 GRIN1Q05586 938 aa15.6■□□□□ 0.09
PDGFRB-202ENST00000517488 NCBP1Q09161 790 aaKnown RBP15.6■□□□□ 0.09
PDGFRB-202ENST00000517488 HYAL1Q12794 435 aa15.6■□□□□ 0.09
PDGFRB-202ENST00000517488 CSPP1Q1MSJ5 1256 aa15.6■□□□□ 0.09
PDGFRB-202ENST00000517488 NOMO2Q5JPE7 1267 aa15.6■□□□□ 0.09
PDGFRB-202ENST00000517488 HYIQ5T013 277 aa15.6■□□□□ 0.09
PDGFRB-202ENST00000517488 FAM173BQ6P4H8 233 aa15.6■□□□□ 0.09
PDGFRB-202ENST00000517488 CDR2LQ86X02 465 aaPredicted RBP15.6■□□□□ 0.09
PDGFRB-202ENST00000517488 PGBD4Q96DM1 585 aa15.6■□□□□ 0.09
PDGFRB-202ENST00000517488 CCDC51Q96ER9 411 aa15.6■□□□□ 0.09
PDGFRB-202ENST00000517488 ZNF558Q96NG5 402 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms