RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 SHCBP1Q8NEM2 672 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SH3TC2Q8TF17 1288 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ZNF384Q8TF68 577 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 TSPEARQ8WU66 669 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 LEO1Q8WVC0 666 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 KCTD13Q8WZ19 329 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 WASF1Q92558 559 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 FBXW5Q969U6 566 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SYTL4Q96C24 671 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PRR11Q96HE9 360 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SEC16BQ96JE7 1060 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 C16orf92Q96LL3 132 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ZNF512Q96ME7 567 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SAMD11Q96NU1 681 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 CLIC6Q96NY7 704 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 TUBGCP5Q96RT8 1024 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SRPK1Q96SB4 655 aaKnown RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 CDC6Q99741 560 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 AARSD1Q9BTE6 412 aaKnown RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GPR87Q9BY21 358 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ENKD1Q9H0I2 346 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GBP3Q9H0R5 595 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 QRSL1Q9H0R6 528 aaKnown RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 OSBPL2Q9H1P3 480 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SLC12A5Q9H2X9 1139 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 CCSER2Q9H7U1 834 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SERHLQ9NQF3 203 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ADARB2Q9NS39 739 aaKnown RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GPR27Q9NS67 375 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 TOMM22Q9NS69 142 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GJB4Q9NTQ9 266 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 TRPM5Q9NZQ8 1165 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 DKK2Q9UBU2 259 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 FTSJ1Q9UET6 329 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 TRPS1Q9UHF7 1281 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SFMBT1Q9UHJ3 866 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 TUBD1Q9UJT1 453 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 LIMCH1Q9UPQ0 1083 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 CDK11AQ9UQ88 783 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ZNF652Q9Y2D9 606 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 MYRFQ9Y2G1 1151 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 USP15Q9Y4E8 981 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 CTDP1Q9Y5B0 961 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PPP2R3BQ9Y5P8 575 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 B3GALT1Q9Y5Z6 326 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ATP23Q9Y6H3 246 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SLC4A7Q9Y6M7 1214 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ATRNL1Q5VV63 1379 aa0.56□□□□□ -2.32
RNU6-1049P-201ENST00000516414 TRAV20A0A0B4J274 112 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 A0A0G2JNJ9 132 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 A0A1W2PPC1 479 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 LOC105371045A0A1W2PR82 267 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 A0A1W2PRX2 142 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PMS2P1A4D2B8 440 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 WIPF3A6NGB9 483 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 MANSC4A6NHS7 340 aaPredicted RBP0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 DRGXA6NNA5 263 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GOLGA8BA8MQT2 603 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 TMEM233B4DJY2 109 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 C1QTNF3-AMACRE9PGA6 284 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 E9PLN8 166 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 H7BY64 318 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 hCG_1984214I3L0E3 225 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 IFNL4K9M1U5 179 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 MASP2O00187 686 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 HRKO00198 91 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ABLIM1O14639 778 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ADAM10O14672 748 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PRPF3O43395 683 aaKnown RBP0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 RAD17O75943 681 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 IPO13O94829 963 aaKnown RBP0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ZBTB7AO95365 584 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PRLP01236 227 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 HMGCRP04035 888 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 FGFR1P11362 822 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 RLBP1P12271 317 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 JUPP14923 745 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GSPT1P15170 499 aaKnown RBP0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 YY1P25490 414 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 LMO1P25800 156 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 HOXD9P28356 352 aaPredicted RBP0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GPR3P46089 330 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PDLIM4P50479 330 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 NEK4P51957 841 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 KRTAP10-7P60409 375 aaPredicted RBP0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 RAC3P60763 192 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 HSD11B2P80365 405 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SIM1P81133 766 aaPredicted RBP0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SMAD3P84022 425 aaKnown RBP0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 IRF9Q00978 393 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 KIAA2012Q0VF49 1180 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 STRN3Q13033 797 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GRB10Q13322 594 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 TCIRG1Q13488 830 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PWP1Q13610 501 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 TUBA3CQ13748 450 aa0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 KLF9Q13886 244 aaPredicted RBP0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 HSP90AA2PQ14568 343 aaPredicted RBP0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 USP10Q14694 798 aaKnown RBP0.55□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GPR19Q15760 415 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms