RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 VSIG10L2P0DP72 767 aa1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 ZSCAN20P17040 1043 aaPredicted RBP1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 KELP23276 732 aa1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 WASP42768 502 aa1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 ZNF143P52747 638 aaPredicted RBP1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 LAMB3Q13751 1172 aa1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 SLC35F1Q5T1Q4 408 aa1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 MORN5Q5VZ52 161 aa1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 FBXW10Q5XX13 1052 aa1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 Q6ZNX1 250 aa1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 C19orf47Q8N9M1 422 aaKnown RBP1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 ARL8AQ96BM9 186 aa1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 ARMC5Q96C12 935 aa1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 Q96MF0 132 aa1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 UROC1Q96N76 676 aa1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 CTAGE1Q96RT6 745 aa1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 KCNJ15Q99712 375 aa1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 PDCD2LQ9BRP1 358 aa1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 GPR27Q9NS67 375 aa1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 RIC8BQ9NVN3 520 aa1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 WDR3Q9UNX4 943 aaKnown RBP eCLIP1.55□□□□□ -2.16
SNORA40.13-201ENST00000516379 TOX4O94842 621 aa1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 TOP3BO95985 862 aaKnown RBP1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 FDXRP22570 491 aa1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 GRK2P25098 689 aa1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 GRK3P35626 688 aa1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 XPCQ01831 940 aaPredicted RBP1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 FAM214AQ32MH5 1076 aa1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 LCE1CQ5T751 118 aa1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 LCE1BQ5T7P3 118 aa1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 CMTM4Q8IZR5 234 aa1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 ACRBPQ8NEB7 543 aa1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 NR4A3Q92570 626 aa1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 NKD2Q969F2 451 aaPredicted RBP1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 SARAFQ96BY9 339 aa1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 TIMP4Q99727 224 aa1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 SMURF1Q9HCE7 757 aa1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 UCKL1Q9NWZ5 548 aa1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 ELOVL5Q9NYP7 299 aa1.54□□□□□ -2.16
SNORA40.13-201ENST00000516379 A0A1B0GVY2 172 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 B4E1Z4 1266 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 HOXA3O43365 443 aaPredicted RBP1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 SORBS3O60504 671 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 C4BPAP04003 597 aaKnown RBP1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 CAPNS1P04632 268 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 JUNP05412 331 aaKnown RBP1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 HERVK_113P62684 666 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 LLGL1Q15334 1064 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 DDB1Q16531 1140 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 BSPRYQ5W0U4 402 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 HIST2H2BCQ6DN03 193 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 C18orf65Q6ZTR6 163 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 GPR149Q86SP6 731 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 CLEC14AQ86T13 490 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 SLC7A14Q8TBB6 771 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 DENND1AQ8TEH3 1009 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 CASKIN2Q8WXE0 1202 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 HMCESQ96FZ2 354 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 CPPED1Q9BRF8 314 aaPredicted RBP1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 RNF181Q9P0P0 153 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 DENND2AQ9ULE3 1009 aa1.53□□□□□ -2.16
SNORA40.13-201ENST00000516379 DIRC3C9JPN6 131 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 GTPBP1O00178 669 aaKnown RBP1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 CKBP12277 381 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 WT1P19544 449 aaPredicted RBP1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 KCNJ6P48051 423 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 THBS3P49746 956 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 NPEPPSP55786 919 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 RNASE9P60153 205 aaKnown RBP1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 RESTQ13127 1097 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 ERV3-1Q14264 604 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 PDCD4Q53EL6 469 aaKnown RBP1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 AKNAD1Q5T1N1 836 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 NEK8Q86SG6 692 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 ZNF227Q86WZ6 799 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 KRT73Q86Y46 540 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 FOXP4Q8IVH2 680 aaPredicted RBP1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 PLA2G15Q8NCC3 412 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 GLB1L3Q8NCI6 653 aaPredicted RBP1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 WDR48Q8TAF3 677 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 PPP1R14AQ96A00 147 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 LSM14BQ9BX40 385 aaKnown RBP1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 ENKD1Q9H0I2 346 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 LRIT1Q9P2V4 623 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 GGT7Q9UJ14 662 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 SRPK3Q9UPE1 567 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 MAP3K2Q9Y2U5 619 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 ENTPD2Q9Y5L3 495 aa1.52□□□□□ -2.17
SNORA40.13-201ENST00000516379 DNAJC6O75061 913 aa1.51□□□□□ -2.17
SNORA40.13-201ENST00000516379 LATS1O95835 1130 aa1.51□□□□□ -2.17
SNORA40.13-201ENST00000516379 CFBP00751 764 aa1.51□□□□□ -2.17
SNORA40.13-201ENST00000516379 HLA-DOAP06340 250 aa1.51□□□□□ -2.17
SNORA40.13-201ENST00000516379 ANTXR2P58335 489 aa1.51□□□□□ -2.17
SNORA40.13-201ENST00000516379 NANOS2P60321 138 aaKnown RBP1.51□□□□□ -2.17
SNORA40.13-201ENST00000516379 MRPS35P82673 323 aaKnown RBP1.51□□□□□ -2.17
SNORA40.13-201ENST00000516379 EXOSC10Q01780 885 aaKnown RBP1.51□□□□□ -2.17
SNORA40.13-201ENST00000516379 TFF2Q03403 129 aa1.51□□□□□ -2.17
SNORA40.13-201ENST00000516379 MAP3K12Q12852 859 aa1.51□□□□□ -2.17
SNORA40.13-201ENST00000516379 KRTAP13-3Q3SY46 172 aa1.51□□□□□ -2.17
SNORA40.13-201ENST00000516379 KRT40Q6A162 431 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms