RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 CABP7Q86V35 215 aa21.48■■□□□ 1.03
LMNA-225ENST00000515824 MICALL1Q8N3F8 863 aa21.48■■□□□ 1.03
LMNA-225ENST00000515824 SLC17A8Q8NDX2 589 aa21.48■■□□□ 1.03
LMNA-225ENST00000515824 PLVAPQ9BX97 442 aa21.48■■□□□ 1.03
LMNA-225ENST00000515824 TMEM117Q9H0C3 514 aa21.48■■□□□ 1.03
LMNA-225ENST00000515824 FAM105AQ9NUU6 356 aa21.48■■□□□ 1.03
LMNA-225ENST00000515824 MRPL42Q9Y6G3 142 aaKnown RBP21.48■■□□□ 1.03
LMNA-225ENST00000515824 LINC00271P0C7V0 271 aa21.47■■□□□ 1.03
LMNA-225ENST00000515824 PPP2R5AQ15172 486 aa21.47■■□□□ 1.03
LMNA-225ENST00000515824 SPOUT1Q5T280 376 aaKnown RBP21.47■■□□□ 1.03
LMNA-225ENST00000515824 ZNF598Q86UK7 904 aaKnown RBP21.47■■□□□ 1.03
LMNA-225ENST00000515824 KIFAP3Q92845 792 aa21.47■■□□□ 1.03
LMNA-225ENST00000515824 CALML4Q96GE6 196 aa21.47■■□□□ 1.03
LMNA-225ENST00000515824 IFT74Q96LB3 600 aa21.47■■□□□ 1.03
LMNA-225ENST00000515824 PNMA5Q96PV4 448 aa21.47■■□□□ 1.03
LMNA-225ENST00000515824 C11orf84Q9BUA3 381 aaPredicted RBP21.47■■□□□ 1.03
LMNA-225ENST00000515824 AAASQ9NRG9 546 aa21.47■■□□□ 1.03
LMNA-225ENST00000515824 ZNF623O75123 536 aa21.46■■□□□ 1.03
LMNA-225ENST00000515824 HOXA11P31270 313 aaPredicted RBP21.46■■□□□ 1.03
LMNA-225ENST00000515824 CEBPZQ03701 1054 aaKnown RBP21.46■■□□□ 1.03
LMNA-225ENST00000515824 MBTD1Q05BQ5 628 aa21.46■■□□□ 1.03
LMNA-225ENST00000515824 PTPAQ15257 358 aa21.46■■□□□ 1.03
LMNA-225ENST00000515824 PTPROQ16827 1216 aa21.46■■□□□ 1.03
LMNA-225ENST00000515824 KCNK18Q7Z418 384 aa21.46■■□□□ 1.03
LMNA-225ENST00000515824 ZBTB8OSQ8IWT0 167 aa21.46■■□□□ 1.03
LMNA-225ENST00000515824 SPRYD3Q8NCJ5 442 aa21.46■■□□□ 1.03
LMNA-225ENST00000515824 PGBD4Q96DM1 585 aa21.46■■□□□ 1.03
LMNA-225ENST00000515824 PLIN2Q99541 437 aa21.46■■□□□ 1.03
LMNA-225ENST00000515824 C2orf40Q9H1Z8 148 aa21.46■■□□□ 1.03
LMNA-225ENST00000515824 EYSQ5T1H1 3165 aa21.45■■□□□ 1.02
LMNA-225ENST00000515824 TSPAN1O60635 241 aa21.45■■□□□ 1.02
LMNA-225ENST00000515824 MARCKSP29966 332 aaPredicted RBP21.45■■□□□ 1.02
LMNA-225ENST00000515824 NAMPTP43490 491 aa21.45■■□□□ 1.02
LMNA-225ENST00000515824 NAALADL2Q58DX5 795 aa21.45■■□□□ 1.02
LMNA-225ENST00000515824 RINT1Q6NUQ1 792 aa21.45■■□□□ 1.02
LMNA-225ENST00000515824 NOTUMQ6P988 496 aa21.45■■□□□ 1.02
LMNA-225ENST00000515824 DEPTORQ8TB45 409 aa21.45■■□□□ 1.02
LMNA-225ENST00000515824 RSPH1Q8WYR4 309 aa21.45■■□□□ 1.02
LMNA-225ENST00000515824 CCDC51Q96ER9 411 aa21.45■■□□□ 1.02
LMNA-225ENST00000515824 CASD1Q96PB1 797 aa21.45■■□□□ 1.02
LMNA-225ENST00000515824 TYW1Q9NV66 732 aaKnown RBP21.45■■□□□ 1.02
LMNA-225ENST00000515824 PCDHB2Q9Y5E7 798 aa21.45■■□□□ 1.02
LMNA-225ENST00000515824 SSBP05455 408 aaKnown RBP eCLIP21.44■■□□□ 1.02
LMNA-225ENST00000515824 ATF7P17544 494 aaPredicted RBP21.44■■□□□ 1.02
LMNA-225ENST00000515824 CDCA2Q69YH5 1023 aaPredicted RBP21.44■■□□□ 1.02
LMNA-225ENST00000515824 SYT2Q8N9I0 419 aaPredicted RBP21.44■■□□□ 1.02
LMNA-225ENST00000515824 CNNM3Q8NE01 707 aa21.44■■□□□ 1.02
LMNA-225ENST00000515824 RASSF8Q8NHQ8 419 aa21.44■■□□□ 1.02
LMNA-225ENST00000515824 P2RX5Q93086 422 aa21.44■■□□□ 1.02
LMNA-225ENST00000515824 MRPL38Q96DV4 380 aaKnown RBP21.44■■□□□ 1.02
LMNA-225ENST00000515824 ZNF396Q96N95 335 aaPredicted RBP21.44■■□□□ 1.02
LMNA-225ENST00000515824 USP28Q96RU2 1077 aa21.44■■□□□ 1.02
LMNA-225ENST00000515824 TIPINQ9BVW5 301 aa21.44■■□□□ 1.02
LMNA-225ENST00000515824 POLD4Q9HCU8 107 aa21.44■■□□□ 1.02
LMNA-225ENST00000515824 RNF19AQ9NV58 838 aa21.44■■□□□ 1.02
LMNA-225ENST00000515824 PRMT7Q9NVM4 692 aaPredicted RBP21.44■■□□□ 1.02
LMNA-225ENST00000515824 PCDHB12Q9Y5F1 795 aa21.44■■□□□ 1.02
LMNA-225ENST00000515824 SRPRBQ9Y5M8 271 aaKnown RBP21.44■■□□□ 1.02
LMNA-225ENST00000515824 PLA2G4BP0C869 781 aa21.43■■□□□ 1.02
LMNA-225ENST00000515824 GRIN1Q05586 938 aa21.43■■□□□ 1.02
LMNA-225ENST00000515824 SLC39A14Q15043 492 aa21.43■■□□□ 1.02
LMNA-225ENST00000515824 AMHR2Q16671 573 aa21.43■■□□□ 1.02
LMNA-225ENST00000515824 TMEM119Q4V9L6 283 aa21.43■■□□□ 1.02
LMNA-225ENST00000515824 CLLU1OSQ5K130 101 aa21.43■■□□□ 1.02
LMNA-225ENST00000515824 C1orf186Q6ZWK4 172 aa21.43■■□□□ 1.02
LMNA-225ENST00000515824 LRRC43Q8N309 656 aa21.43■■□□□ 1.02
LMNA-225ENST00000515824 HELQQ8TDG4 1101 aa21.43■■□□□ 1.02
LMNA-225ENST00000515824 BSNDQ8WZ55 320 aa21.43■■□□□ 1.02
LMNA-225ENST00000515824 CPB2Q96IY4 423 aa21.43■■□□□ 1.02
LMNA-225ENST00000515824 PRIMPOLQ96LW4 560 aa21.43■■□□□ 1.02
LMNA-225ENST00000515824 LMAN2LQ9H0V9 348 aa21.43■■□□□ 1.02
LMNA-225ENST00000515824 CSRNP2Q9H175 543 aa21.43■■□□□ 1.02
LMNA-225ENST00000515824 ZSCAN22P10073 491 aaPredicted RBP21.42■■□□□ 1.02
LMNA-225ENST00000515824 ARF4P18085 180 aaPredicted RBP21.42■■□□□ 1.02
LMNA-225ENST00000515824 SKIV2LQ15477 1246 aaKnown RBP21.42■■□□□ 1.02
LMNA-225ENST00000515824 MAPK6Q16659 721 aa21.42■■□□□ 1.02
LMNA-225ENST00000515824 CSPP1Q1MSJ5 1256 aa21.42■■□□□ 1.02
LMNA-225ENST00000515824 LONRF3Q496Y0 759 aa21.42■■□□□ 1.02
LMNA-225ENST00000515824 UBXN11Q5T124 520 aa21.42■■□□□ 1.02
LMNA-225ENST00000515824 GLB1LQ6UWU2 654 aa21.42■■□□□ 1.02
LMNA-225ENST00000515824 MRPL10Q7Z7H8 261 aaKnown RBP21.42■■□□□ 1.02
LMNA-225ENST00000515824 LPPQ93052 612 aa21.42■■□□□ 1.02
LMNA-225ENST00000515824 DRC1Q96MC2 740 aa21.42■■□□□ 1.02
LMNA-225ENST00000515824 RUSC1Q9BVN2 902 aa21.42■■□□□ 1.02
LMNA-225ENST00000515824 MRPL9Q9BYD2 267 aaKnown RBP21.42■■□□□ 1.02
LMNA-225ENST00000515824 CCSER1Q9C0I3 900 aa21.42■■□□□ 1.02
LMNA-225ENST00000515824 FZD8Q9H461 694 aa21.42■■□□□ 1.02
LMNA-225ENST00000515824 CWH43Q9H720 699 aa21.42■■□□□ 1.02
LMNA-225ENST00000515824 KCND2Q9NZV8 630 aa21.42■■□□□ 1.02
LMNA-225ENST00000515824 FBXO2Q9UK22 296 aaPredicted RBP21.42■■□□□ 1.02
LMNA-225ENST00000515824 PLAGL2Q9UPG8 496 aa21.42■■□□□ 1.02
LMNA-225ENST00000515824 MORC2Q9Y6X9 1032 aaPredicted RBP21.42■■□□□ 1.02
LMNA-225ENST00000515824 PRRC2BQ5JSZ5 2229 aaKnown RBP21.41■■□□□ 1.02
LMNA-225ENST00000515824 HIP1RO75146 1068 aa21.41■■□□□ 1.02
LMNA-225ENST00000515824 LAG3P18627 525 aa21.41■■□□□ 1.02
LMNA-225ENST00000515824 GUCY2CP25092 1073 aa21.41■■□□□ 1.02
LMNA-225ENST00000515824 EFNA5P52803 228 aa21.41■■□□□ 1.02
LMNA-225ENST00000515824 SLC12A3P55017 1021 aa21.41■■□□□ 1.02
LMNA-225ENST00000515824 KARSQ15046 597 aaKnown RBP21.41■■□□□ 1.02
LMNA-225ENST00000515824 FAM187BQ17R55 369 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms