RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 PCDHGC5Q9Y5F6 944 aa19.52■□□□□ 0.72
DDX41-217ENST00000515562 PI4K2BG5E9Z4 385 aa19.51■□□□□ 0.71
DDX41-217ENST00000515562 ASAP2O43150 1006 aa19.51■□□□□ 0.71
DDX41-217ENST00000515562 SRGAP2BP0DMP2 458 aa19.51■□□□□ 0.71
DDX41-217ENST00000515562 ERVFC1P60507 584 aa19.51■□□□□ 0.71
DDX41-217ENST00000515562 LAMTOR4Q0VGL1 99 aa19.51■□□□□ 0.71
DDX41-217ENST00000515562 COASYQ13057 564 aa19.51■□□□□ 0.71
DDX41-217ENST00000515562 TMEM31Q5JXX7 168 aa19.51■□□□□ 0.71
DDX41-217ENST00000515562 GLB1LQ6UWU2 654 aa19.51■□□□□ 0.71
DDX41-217ENST00000515562 SMRP1Q8NCR6 262 aa19.51■□□□□ 0.71
DDX41-217ENST00000515562 CCDC43Q96MW1 224 aaKnown RBP19.51■□□□□ 0.71
DDX41-217ENST00000515562 HSD17B14Q9BPX1 270 aa19.51■□□□□ 0.71
DDX41-217ENST00000515562 TCF25Q9BQ70 676 aa19.51■□□□□ 0.71
DDX41-217ENST00000515562 NGRNQ9NPE2 291 aaKnown RBP19.51■□□□□ 0.71
DDX41-217ENST00000515562 ENTPD7Q9NQZ7 604 aa19.51■□□□□ 0.71
DDX41-217ENST00000515562 BMP2KQ9NSY1 1161 aaPredicted RBP19.51■□□□□ 0.71
DDX41-217ENST00000515562 ZNF623O75123 536 aa19.5■□□□□ 0.71
DDX41-217ENST00000515562 SLITRK3O94933 977 aa19.5■□□□□ 0.71
DDX41-217ENST00000515562 EYA4O95677 639 aa19.5■□□□□ 0.71
DDX41-217ENST00000515562 GLP2RO95838 553 aa19.5■□□□□ 0.71
DDX41-217ENST00000515562 SRGAP2CP0DJJ0 459 aa19.5■□□□□ 0.71
DDX41-217ENST00000515562 ALADP13716 330 aa19.5■□□□□ 0.71
DDX41-217ENST00000515562 PBX3P40426 434 aa19.5■□□□□ 0.71
DDX41-217ENST00000515562 ALDH7A1P49419 539 aaKnown RBP19.5■□□□□ 0.71
DDX41-217ENST00000515562 MXD4Q14582 209 aaPredicted RBP19.5■□□□□ 0.71
DDX41-217ENST00000515562 PCBP1Q15365 356 aaKnown RBP eCLIP19.5■□□□□ 0.71
DDX41-217ENST00000515562 DUSP6Q16828 381 aa19.5■□□□□ 0.71
DDX41-217ENST00000515562 PLPP4Q5VZY2 271 aa19.5■□□□□ 0.71
DDX41-217ENST00000515562 FERMT3Q86UX7 667 aa19.5■□□□□ 0.71
DDX41-217ENST00000515562 CCDC83Q8IWF9 413 aa19.5■□□□□ 0.71
DDX41-217ENST00000515562 SLC39A11Q8N1S5 342 aa19.5■□□□□ 0.71
DDX41-217ENST00000515562 C8orf76Q96K31 380 aa19.5■□□□□ 0.71
DDX41-217ENST00000515562 MTMR9Q96QG7 549 aa19.5■□□□□ 0.71
DDX41-217ENST00000515562 ANKEF1Q9NU02 776 aa19.5■□□□□ 0.71
DDX41-217ENST00000515562 CLEC1BQ9P126 229 aa19.5■□□□□ 0.71
DDX41-217ENST00000515562 C19orf67A6NJJ6 358 aa19.49■□□□□ 0.71
DDX41-217ENST00000515562 WNT7AO00755 349 aa19.49■□□□□ 0.71
DDX41-217ENST00000515562 DGAT1O75907 488 aa19.49■□□□□ 0.71
DDX41-217ENST00000515562 TXKP42681 527 aa19.49■□□□□ 0.71
DDX41-217ENST00000515562 HMGN5P82970 282 aaKnown RBP19.49■□□□□ 0.71
DDX41-217ENST00000515562 RNF149Q8NC42 400 aa19.49■□□□□ 0.71
DDX41-217ENST00000515562 PGBD4Q96DM1 585 aa19.49■□□□□ 0.71
DDX41-217ENST00000515562 ZSCAN31Q96LW9 406 aaPredicted RBP19.49■□□□□ 0.71
DDX41-217ENST00000515562 SH2B1Q9NRF2 756 aaPredicted RBP19.49■□□□□ 0.71
DDX41-217ENST00000515562 BARX2Q9UMQ3 279 aaPredicted RBP19.49■□□□□ 0.71
DDX41-217ENST00000515562 PER2O15055 1255 aa19.48■□□□□ 0.71
DDX41-217ENST00000515562 GPR37L1O60883 481 aa19.48■□□□□ 0.71
DDX41-217ENST00000515562 ERLIN2O94905 339 aa19.48■□□□□ 0.71
DDX41-217ENST00000515562 BCAR1P56945 870 aa19.48■□□□□ 0.71
DDX41-217ENST00000515562 ORC2Q13416 577 aaPredicted RBP19.48■□□□□ 0.71
DDX41-217ENST00000515562 TFDP1Q14186 410 aa19.48■□□□□ 0.71
DDX41-217ENST00000515562 TMEM169Q96HH4 297 aa19.48■□□□□ 0.71
DDX41-217ENST00000515562 FOXP1Q9H334 677 aaPredicted RBP19.48■□□□□ 0.71
DDX41-217ENST00000515562 MINDY3Q9H8M7 445 aa19.48■□□□□ 0.71
DDX41-217ENST00000515562 PCDHB2Q9Y5E7 798 aa19.48■□□□□ 0.71
DDX41-217ENST00000515562 POTEMA6NI47 508 aa19.47■□□□□ 0.71
DDX41-217ENST00000515562 ZBTB39O15060 712 aa19.47■□□□□ 0.71
DDX41-217ENST00000515562 ZC3H11AO75152 810 aaKnown RBP eCLIP19.47■□□□□ 0.71
DDX41-217ENST00000515562 MCM7P33993 719 aa19.47■□□□□ 0.71
DDX41-217ENST00000515562 GUCY1B3Q02153 619 aa19.47■□□□□ 0.71
DDX41-217ENST00000515562 SMC1AQ14683 1233 aaKnown RBP19.47■□□□□ 0.71
DDX41-217ENST00000515562 BMS1Q14692 1282 aaKnown RBP19.47■□□□□ 0.71
DDX41-217ENST00000515562 NOMO2Q5JPE7 1267 aa19.47■□□□□ 0.71
DDX41-217ENST00000515562 TMC7Q7Z402 723 aa19.47■□□□□ 0.71
DDX41-217ENST00000515562 URGCPQ8TCY9 931 aa19.47■□□□□ 0.71
DDX41-217ENST00000515562 LPPQ93052 612 aa19.47■□□□□ 0.71
DDX41-217ENST00000515562 LRFN3Q9BTN0 628 aa19.47■□□□□ 0.71
DDX41-217ENST00000515562 XPNPEP1Q9NQW7 623 aa19.47■□□□□ 0.71
DDX41-217ENST00000515562 TBC1D13Q9NVG8 400 aa19.47■□□□□ 0.71
DDX41-217ENST00000515562 INPP5FQ9Y2H2 1132 aa19.47■□□□□ 0.71
DDX41-217ENST00000515562 CNTNAP2Q9UHC6 1331 aa19.47■□□□□ 0.71
DDX41-217ENST00000515562 DCXO43602 365 aa19.46■□□□□ 0.71
DDX41-217ENST00000515562 ATP2B1P20020 1258 aa19.46■□□□□ 0.71
DDX41-217ENST00000515562 AXLP30530 894 aa19.46■□□□□ 0.71
DDX41-217ENST00000515562 RARRES1P49788 294 aa19.46■□□□□ 0.71
DDX41-217ENST00000515562 RNASELQ05823 741 aaKnown RBP19.46■□□□□ 0.71
DDX41-217ENST00000515562 POU5F1BQ06416 359 aa19.46■□□□□ 0.71
DDX41-217ENST00000515562 LONRF3Q496Y0 759 aa19.46■□□□□ 0.71
DDX41-217ENST00000515562 C8orf34Q49A92 452 aa19.46■□□□□ 0.71
DDX41-217ENST00000515562 TMEM184AQ6ZMB5 413 aa19.46■□□□□ 0.71
DDX41-217ENST00000515562 IFNLR1Q8IU57 520 aaPredicted RBP19.46■□□□□ 0.71
DDX41-217ENST00000515562 CCDC51Q96ER9 411 aa19.46■□□□□ 0.71
DDX41-217ENST00000515562 TMEM60Q9H2L4 133 aa19.46■□□□□ 0.71
DDX41-217ENST00000515562 C11orf16Q9NQ32 467 aa19.46■□□□□ 0.71
DDX41-217ENST00000515562 MEIS3P2A8K0S8 358 aa19.45■□□□□ 0.7
DDX41-217ENST00000515562 HIDE1A8MVS5 230 aa19.45■□□□□ 0.7
DDX41-217ENST00000515562 OFD1O75665 1012 aa19.45■□□□□ 0.7
DDX41-217ENST00000515562 XRCC6P12956 609 aaKnown RBP eCLIP19.45■□□□□ 0.7
DDX41-217ENST00000515562 HOXA11P31270 313 aaPredicted RBP19.45■□□□□ 0.7
DDX41-217ENST00000515562 RBM25P49756 843 aaKnown RBP19.45■□□□□ 0.7
DDX41-217ENST00000515562 PTENP60484 403 aa19.45■□□□□ 0.7
DDX41-217ENST00000515562 NCBP1Q09161 790 aaKnown RBP19.45■□□□□ 0.7
DDX41-217ENST00000515562 GNL2Q13823 731 aaKnown RBP19.45■□□□□ 0.7
DDX41-217ENST00000515562 NOTUMQ6P988 496 aa19.45■□□□□ 0.7
DDX41-217ENST00000515562 MRPL10Q7Z7H8 261 aaKnown RBP19.45■□□□□ 0.7
DDX41-217ENST00000515562 FAM184AQ8NB25 1140 aa19.45■□□□□ 0.7
DDX41-217ENST00000515562 CNNM3Q8NE01 707 aa19.45■□□□□ 0.7
DDX41-217ENST00000515562 FBXO18Q8NFZ0 1043 aa19.45■□□□□ 0.7
DDX41-217ENST00000515562 VN1R2Q8NFZ6 395 aa19.45■□□□□ 0.7
DDX41-217ENST00000515562 NFKBIZQ9BYH8 718 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms