RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 TCTN3Q6NUS6 607 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 FILIP1Q7Z7B0 1213 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 RTN4RL1Q86UN2 441 aaPredicted RBP4.86□□□□□ -1.63
CAST-242ENST00000515063 TAX1BP1Q86VP1 789 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 PASD1Q8IV76 773 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 ZZZ3Q8IYH5 903 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 FAM9BQ8IZU0 186 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 GFM2Q969S9 779 aaKnown RBP4.86□□□□□ -1.63
CAST-242ENST00000515063 MAML3Q96JK9 1138 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 RNPC3Q96LT9 517 aaKnown RBP4.86□□□□□ -1.63
CAST-242ENST00000515063 GNRHR2Q96P88 292 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 PTPN18Q99952 460 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 ORAI3Q9BRQ5 295 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 KRTAP3-1Q9BYR8 98 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 C12orf65Q9H3J6 166 aaKnown RBP4.86□□□□□ -1.63
CAST-242ENST00000515063 PIF1Q9H611 641 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 SAE1Q9UBE0 346 aaPredicted RBP4.86□□□□□ -1.63
CAST-242ENST00000515063 FAM184BQ9ULE4 1060 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 ZFR2Q9UPR6 939 aaKnown RBP4.86□□□□□ -1.63
CAST-242ENST00000515063 PLAAQ9Y263 795 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 PTPN22Q9Y2R2 807 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 SPAG9O60271 1321 aaKnown RBP4.86□□□□□ -1.63
CAST-242ENST00000515063 KANK1Q14678 1352 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 NPC1L1Q9UHC9 1359 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 TRAPPC8Q9Y2L5 1435 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 ATP7AQ04656 1500 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 KIF1BO60333 1816 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 H2AFYO75367 372 aaKnown RBP4.85□□□□□ -1.63
CAST-242ENST00000515063 COMTP21964 271 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 NEK4P51957 841 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 TMF1P82094 1093 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 SLC6A3Q01959 620 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 OCRLQ01968 901 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 DGKDQ16760 1214 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 TIGD7Q6NT04 549 aaPredicted RBP4.85□□□□□ -1.63
CAST-242ENST00000515063 ZNF585AQ6P3V2 769 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 KLHDC10Q6PID8 442 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 POLNQ7Z5Q5 900 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 PPM1KQ8N3J5 372 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 Q8TCH9 128 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 RPGRQ92834 1020 aaKnown RBP4.85□□□□□ -1.63
CAST-242ENST00000515063 FOXRED1Q96CU9 486 aaPredicted RBP4.85□□□□□ -1.63
CAST-242ENST00000515063 FEZ1Q99689 392 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 KIAA1683Q9H0B3 1180 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 NELFAQ9H3P2 528 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 KANSL2Q9H9L4 492 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 FANCLQ9NW38 375 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 IFT57Q9NWB7 429 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 SYNPO2Q9UMS6 1093 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 TESMINQ9Y4I5 508 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 SLC30A1Q9Y6M5 507 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 FANCIQ9NVI1 1328 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 MYOM2P54296 1465 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 SYNMO15061 1565 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 IFT172Q9UG01 1749 aa4.85□□□□□ -1.63
CAST-242ENST00000515063 SCAF11Q99590 1463 aaKnown RBP4.84□□□□□ -1.63
CAST-242ENST00000515063 PMS2P1A4D2B8 440 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 TRAF5O00463 557 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 SDSP20132 328 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 BCAR1P56945 870 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 SART3Q15020 963 aaKnown RBP4.84□□□□□ -1.63
CAST-242ENST00000515063 PRKD1Q15139 912 aaPredicted RBP4.84□□□□□ -1.63
CAST-242ENST00000515063 LARP4Q71RC2 724 aaKnown RBP eCLIP4.84□□□□□ -1.63
CAST-242ENST00000515063 GGNQ86UU5 652 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 PHYKPLQ8IUZ5 450 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 NIM1KQ8IY84 436 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 AHI1Q8N157 1196 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 C7orf31Q8N865 590 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 NINJ1Q92982 152 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 FAM89AQ96GI7 184 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 TUBGCP5Q96RT8 1024 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 TESK2Q96S53 571 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 DPYSL5Q9BPU6 564 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 KCMF1Q9P0J7 381 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 JAG2Q9Y219 1238 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 SPO11Q9Y5K1 396 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 CD2APQ9Y5K6 639 aa4.84□□□□□ -1.63
CAST-242ENST00000515063 CLTCL1P53675 1640 aa4.83□□□□□ -1.64
CAST-242ENST00000515063 MROH1Q8NDA8 1641 aa4.83□□□□□ -1.64
CAST-242ENST00000515063 MYO3AQ8NEV4 1616 aa4.83□□□□□ -1.64
CAST-242ENST00000515063 MAP3K4Q9Y6R4 1608 aa4.83□□□□□ -1.64
CAST-242ENST00000515063 FANCAO15360 1455 aa4.83□□□□□ -1.64
CAST-242ENST00000515063 LMTK3Q96Q04 1460 aa4.83□□□□□ -1.64
CAST-242ENST00000515063 BLMP54132 1417 aaPredicted RBP4.83□□□□□ -1.64
CAST-242ENST00000515063 EIF3AQ14152 1382 aaKnown RBP4.83□□□□□ -1.64
CAST-242ENST00000515063 SLC26A4O43511 780 aa4.83□□□□□ -1.64
CAST-242ENST00000515063 FOXS1O43638 330 aa4.83□□□□□ -1.64
CAST-242ENST00000515063 POU3F2P20265 443 aaPredicted RBP4.83□□□□□ -1.64
CAST-242ENST00000515063 CANXP27824 592 aaKnown RBP4.83□□□□□ -1.64
CAST-242ENST00000515063 STAT5BP51692 787 aa4.83□□□□□ -1.64
CAST-242ENST00000515063 HHEXQ03014 270 aa4.83□□□□□ -1.64
CAST-242ENST00000515063 PRAMEF9Q5VWM5 478 aa4.83□□□□□ -1.64
CAST-242ENST00000515063 LRRTM3Q86VH5 581 aa4.83□□□□□ -1.64
CAST-242ENST00000515063 PALM2Q8IXS6 379 aa4.83□□□□□ -1.64
CAST-242ENST00000515063 FUKQ8N0W3 1084 aa4.83□□□□□ -1.64
CAST-242ENST00000515063 OR5AN1Q8NGI8 311 aa4.83□□□□□ -1.64
CAST-242ENST00000515063 OR14K1Q8NGZ2 314 aa4.83□□□□□ -1.64
CAST-242ENST00000515063 SH3RF3Q8TEJ3 882 aaPredicted RBP4.83□□□□□ -1.64
CAST-242ENST00000515063 EDAQ92838 391 aa4.83□□□□□ -1.64
CAST-242ENST00000515063 C16orf92Q96LL3 132 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms