RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 KCNC3Q14003 757 aa14.89□□□□□ -0.03
PFDN1-206ENST00000514611 EMC2Q15006 297 aa14.89□□□□□ -0.03
PFDN1-206ENST00000514611 PDE12Q6L8Q7 609 aaKnown RBP14.89□□□□□ -0.03
PFDN1-206ENST00000514611 RNF135Q8IUD6 432 aa14.89□□□□□ -0.03
PFDN1-206ENST00000514611 C4orf19Q8IY42 314 aa14.89□□□□□ -0.03
PFDN1-206ENST00000514611 PSPC1Q8WXF1 523 aaKnown RBP14.89□□□□□ -0.03
PFDN1-206ENST00000514611 TRAIPQ9BWF2 469 aa14.89□□□□□ -0.03
PFDN1-206ENST00000514611 INO80BQ9C086 356 aaPredicted RBP14.89□□□□□ -0.03
PFDN1-206ENST00000514611 MINDY3Q9H8M7 445 aa14.89□□□□□ -0.03
PFDN1-206ENST00000514611 BRMS1Q9HCU9 246 aa14.89□□□□□ -0.03
PFDN1-206ENST00000514611 AGPAT5Q9NUQ2 364 aa14.89□□□□□ -0.03
PFDN1-206ENST00000514611 PUF60Q9UHX1 559 aaKnown RBP14.89□□□□□ -0.03
PFDN1-206ENST00000514611 INPP5FQ9Y2H2 1132 aa14.89□□□□□ -0.03
PFDN1-206ENST00000514611 BTBD18B2RXH4 712 aa14.88□□□□□ -0.03
PFDN1-206ENST00000514611 SRGAP2CP0DJJ0 459 aa14.88□□□□□ -0.03
PFDN1-206ENST00000514611 RFC5P40937 340 aa14.88□□□□□ -0.03
PFDN1-206ENST00000514611 NEK4P51957 841 aa14.88□□□□□ -0.03
PFDN1-206ENST00000514611 KRT17Q04695 432 aa14.88□□□□□ -0.03
PFDN1-206ENST00000514611 XKR9Q5GH70 373 aa14.88□□□□□ -0.03
PFDN1-206ENST00000514611 TMC7Q7Z402 723 aa14.88□□□□□ -0.03
PFDN1-206ENST00000514611 DIS3L2Q8IYB7 885 aaKnown RBP14.88□□□□□ -0.03
PFDN1-206ENST00000514611 SLFN12Q8IYM2 578 aa14.88□□□□□ -0.03
PFDN1-206ENST00000514611 PRPF31Q8WWY3 499 aaKnown RBP14.88□□□□□ -0.03
PFDN1-206ENST00000514611 FAM122AQ96E09 287 aa14.88□□□□□ -0.03
PFDN1-206ENST00000514611 APOL5Q9BWW9 433 aa14.88□□□□□ -0.03
PFDN1-206ENST00000514611 ZSWIM4Q9H7M6 989 aa14.88□□□□□ -0.03
PFDN1-206ENST00000514611 NGRNQ9NPE2 291 aaKnown RBP14.88□□□□□ -0.03
PFDN1-206ENST00000514611 TBC1D13Q9NVG8 400 aa14.88□□□□□ -0.03
PFDN1-206ENST00000514611 B4GALT3O60512 393 aa14.87□□□□□ -0.03
PFDN1-206ENST00000514611 CA8P35219 290 aa14.87□□□□□ -0.03
PFDN1-206ENST00000514611 TECP42680 631 aa14.87□□□□□ -0.03
PFDN1-206ENST00000514611 LAMTOR4Q0VGL1 99 aa14.87□□□□□ -0.03
PFDN1-206ENST00000514611 SMC1AQ14683 1233 aaKnown RBP14.87□□□□□ -0.03
PFDN1-206ENST00000514611 CALCRLQ16602 461 aa14.87□□□□□ -0.03
PFDN1-206ENST00000514611 ANKRD54Q6NXT1 300 aa14.87□□□□□ -0.03
PFDN1-206ENST00000514611 GLB1LQ6UWU2 654 aa14.87□□□□□ -0.03
PFDN1-206ENST00000514611 TPH2Q8IWU9 490 aa14.87□□□□□ -0.03
PFDN1-206ENST00000514611 RNF149Q8NC42 400 aa14.87□□□□□ -0.03
PFDN1-206ENST00000514611 BCL7CQ8WUZ0 217 aaPredicted RBP14.87□□□□□ -0.03
PFDN1-206ENST00000514611 SUSD6Q92537 303 aa14.87□□□□□ -0.03
PFDN1-206ENST00000514611 MTRQ99707 1265 aa14.87□□□□□ -0.03
PFDN1-206ENST00000514611 EIF2AK1Q9BQI3 630 aaKnown RBP14.87□□□□□ -0.03
PFDN1-206ENST00000514611 NRDE2Q9H7Z3 1164 aa14.87□□□□□ -0.03
PFDN1-206ENST00000514611 XPNPEP1Q9NQW7 623 aa14.87□□□□□ -0.03
PFDN1-206ENST00000514611 CDH22Q9UJ99 828 aa14.87□□□□□ -0.03
PFDN1-206ENST00000514611 PPME1Q9Y570 386 aa14.87□□□□□ -0.03
PFDN1-206ENST00000514611 PCDHB2Q9Y5E7 798 aa14.87□□□□□ -0.03
PFDN1-206ENST00000514611 FSD2A1L4K1 749 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 C2orf71A6NGG8 1288 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 LOC730098B7Z3J9 87 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 NEMFO60524 1076 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 OFD1O75665 1012 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 SLITRK3O94933 977 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 BAG4O95429 457 aaKnown RBP14.86□□□□□ -0.03
PFDN1-206ENST00000514611 SKIP12755 728 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 HOXA11P31270 313 aaPredicted RBP14.86□□□□□ -0.03
PFDN1-206ENST00000514611 ALDH7A1P49419 539 aaKnown RBP14.86□□□□□ -0.03
PFDN1-206ENST00000514611 RAB27AP51159 221 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 AFF1P51825 1210 aaKnown RBP14.86□□□□□ -0.03
PFDN1-206ENST00000514611 GUCY1B3Q02153 619 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 HERC4Q5GLZ8 1057 aaPredicted RBP14.86□□□□□ -0.03
PFDN1-206ENST00000514611 NOMO2Q5JPE7 1267 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 ERICH6BQ5W0A0 696 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 SYCE2Q6PIF2 218 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 TMEM184AQ6ZMB5 413 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 AGMOQ6ZNB7 445 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 OTUD6AQ7L8S5 288 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 FERMT3Q86UX7 667 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 AUTS2Q8WXX7 1259 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 TMEM169Q96HH4 297 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 RPGRIP1Q96KN7 1286 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 PHF7Q9BWX1 381 aaPredicted RBP14.86□□□□□ -0.03
PFDN1-206ENST00000514611 GBP3Q9H0R5 595 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 TTC12Q9H892 705 aaPredicted RBP14.86□□□□□ -0.03
PFDN1-206ENST00000514611 DNAJB4Q9UDY4 337 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 HCFC2Q9Y5Z7 792 aa14.86□□□□□ -0.03
PFDN1-206ENST00000514611 ARID2Q68CP9 1835 aa14.85□□□□□ -0.03
PFDN1-206ENST00000514611 POTEMA6NI47 508 aa14.85□□□□□ -0.03
PFDN1-206ENST00000514611 GAS2O43903 313 aaKnown RBP14.85□□□□□ -0.03
PFDN1-206ENST00000514611 ZNF623O75123 536 aa14.85□□□□□ -0.03
PFDN1-206ENST00000514611 SRGAP2BP0DMP2 458 aa14.85□□□□□ -0.03
PFDN1-206ENST00000514611 SP100P23497 879 aaPredicted RBP14.85□□□□□ -0.03
PFDN1-206ENST00000514611 UBXN11Q5T124 520 aa14.85□□□□□ -0.03
PFDN1-206ENST00000514611 SRGAP1Q7Z6B7 1085 aa14.85□□□□□ -0.03
PFDN1-206ENST00000514611 VPS52Q8N1B4 723 aa14.85□□□□□ -0.03
PFDN1-206ENST00000514611 MRPL43Q8N983 215 aaKnown RBP14.85□□□□□ -0.03
PFDN1-206ENST00000514611 TCP11Q8WWU5 503 aa14.85□□□□□ -0.03
PFDN1-206ENST00000514611 ZBP1Q9H171 429 aa14.85□□□□□ -0.03
PFDN1-206ENST00000514611 S1PR5Q9H228 398 aa14.85□□□□□ -0.03
PFDN1-206ENST00000514611 TMEM60Q9H2L4 133 aa14.85□□□□□ -0.03
PFDN1-206ENST00000514611 PCDHA12Q9UN75 941 aa14.85□□□□□ -0.03
PFDN1-206ENST00000514611 WDFY4Q6ZS81 3184 aa14.85□□□□□ -0.03
PFDN1-206ENST00000514611 A0A087WWV3 80 aa14.84□□□□□ -0.03
PFDN1-206ENST00000514611 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.84□□□□□ -0.03
PFDN1-206ENST00000514611 CLASP2O75122 1294 aaKnown RBP14.84□□□□□ -0.03
PFDN1-206ENST00000514611 GALTP07902 379 aa14.84□□□□□ -0.03
PFDN1-206ENST00000514611 TXKP42681 527 aa14.84□□□□□ -0.03
PFDN1-206ENST00000514611 SLC11A1P49279 550 aa14.84□□□□□ -0.03
PFDN1-206ENST00000514611 RNASELQ05823 741 aaKnown RBP14.84□□□□□ -0.03
PFDN1-206ENST00000514611 TRIM29Q14134 588 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms