RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 DAW1Q8N136 415 aa15.44■□□□□ 0.06
USP46-209ENST00000514536 CRIPAKQ8N1N5 446 aa15.44■□□□□ 0.06
USP46-209ENST00000514536 DEPTORQ8TB45 409 aa15.44■□□□□ 0.06
USP46-209ENST00000514536 YME1L1Q96TA2 773 aa15.44■□□□□ 0.06
USP46-209ENST00000514536 PIN4Q9Y237 131 aaKnown RBP15.44■□□□□ 0.06
USP46-209ENST00000514536 PCDHB7Q9Y5E2 793 aa15.44■□□□□ 0.06
USP46-209ENST00000514536 LOXHD1Q8IVV2 1947 aa15.44■□□□□ 0.06
USP46-209ENST00000514536 ARID2Q68CP9 1835 aa15.43■□□□□ 0.06
USP46-209ENST00000514536 A0A087X0B3 334 aa15.43■□□□□ 0.06
USP46-209ENST00000514536 ERLIN2O94905 339 aa15.43■□□□□ 0.06
USP46-209ENST00000514536 ARHGEF15O94989 841 aa15.43■□□□□ 0.06
USP46-209ENST00000514536 NAMPTP43490 491 aa15.43■□□□□ 0.06
USP46-209ENST00000514536 CACNB1Q02641 598 aaPredicted RBP15.43■□□□□ 0.06
USP46-209ENST00000514536 MBTD1Q05BQ5 628 aa15.43■□□□□ 0.06
USP46-209ENST00000514536 PPP2R2DQ66LE6 453 aa15.43■□□□□ 0.06
USP46-209ENST00000514536 TWF2Q6IBS0 349 aaKnown RBP15.43■□□□□ 0.06
USP46-209ENST00000514536 SHC4Q6S5L8 630 aa15.43■□□□□ 0.06
USP46-209ENST00000514536 GPBP1Q86WP2 473 aa15.43■□□□□ 0.06
USP46-209ENST00000514536 PDILTQ8N807 584 aa15.43■□□□□ 0.06
USP46-209ENST00000514536 LARP4BQ92615 738 aaKnown RBP15.43■□□□□ 0.06
USP46-209ENST00000514536 SPATA32Q96LK8 384 aa15.43■□□□□ 0.06
USP46-209ENST00000514536 TIPINQ9BVW5 301 aa15.43■□□□□ 0.06
USP46-209ENST00000514536 NFKBIZQ9BYH8 718 aa15.43■□□□□ 0.06
USP46-209ENST00000514536 AGPAT5Q9NUQ2 364 aa15.43■□□□□ 0.06
USP46-209ENST00000514536 DACT1Q9NYF0 836 aa15.43■□□□□ 0.06
USP46-209ENST00000514536 KCND2Q9NZV8 630 aa15.43■□□□□ 0.06
USP46-209ENST00000514536 STK17AQ9UEE5 414 aa15.43■□□□□ 0.06
USP46-209ENST00000514536 MICAL3Q7RTP6 2002 aa15.42■□□□□ 0.06
USP46-209ENST00000514536 A0A0C4DFX4 3053 aa15.42■□□□□ 0.06
USP46-209ENST00000514536 TMEM265A0A087WTH1 108 aa15.42■□□□□ 0.06
USP46-209ENST00000514536 CCDC169A6NNP5 214 aa15.42■□□□□ 0.06
USP46-209ENST00000514536 HOXA11P31270 313 aaPredicted RBP15.42■□□□□ 0.06
USP46-209ENST00000514536 PEX3P56589 373 aa15.42■□□□□ 0.06
USP46-209ENST00000514536 MAPK7Q13164 816 aa15.42■□□□□ 0.06
USP46-209ENST00000514536 CCDC73Q6ZRK6 1079 aa15.42■□□□□ 0.06
USP46-209ENST00000514536 ECHDC2Q86YB7 292 aa15.42■□□□□ 0.06
USP46-209ENST00000514536 ZBTB8OSQ8IWT0 167 aa15.42■□□□□ 0.06
USP46-209ENST00000514536 LEO1Q8WVC0 666 aaPredicted RBP15.42■□□□□ 0.06
USP46-209ENST00000514536 DRC1Q96MC2 740 aa15.42■□□□□ 0.06
USP46-209ENST00000514536 GUCD1Q96NT3 240 aa15.42■□□□□ 0.06
USP46-209ENST00000514536 KIFC3Q9BVG8 833 aa15.42■□□□□ 0.06
USP46-209ENST00000514536 A0A0U1RQF3 1178 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 TSPAN1O60635 241 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 DGKIO75912 1065 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 LIG1P18858 919 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 STAT6P42226 847 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 NPTX2P47972 431 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 TAP1Q03518 808 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 NCBP1Q09161 790 aaKnown RBP15.41■□□□□ 0.06
USP46-209ENST00000514536 PCBP1Q15365 356 aaKnown RBP eCLIP15.41■□□□□ 0.06
USP46-209ENST00000514536 AMHR2Q16671 573 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 NAALADL2Q58DX5 795 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 CDCA2Q69YH5 1023 aaPredicted RBP15.41■□□□□ 0.06
USP46-209ENST00000514536 RNF169Q8NCN4 708 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 CPB2Q96IY4 423 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 C2orf40Q9H1Z8 148 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 ELAC1Q9H777 363 aaKnown RBP15.41■□□□□ 0.06
USP46-209ENST00000514536 CERS4Q9HA82 394 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 RNF216Q9NWF9 866 aaPredicted RBP15.41■□□□□ 0.06
USP46-209ENST00000514536 TMEM161AQ9NX61 479 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 LINC01553A4QN01 128 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 B4GALT5O43286 388 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 KRT18P05783 430 aaKnown RBP15.41■□□□□ 0.06
USP46-209ENST00000514536 GATMP50440 423 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 GIT2Q14161 759 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 GRIN2CQ14957 1233 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 SV2BQ7L1I2 683 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 SPRED2Q7Z698 418 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 SP7Q8TDD2 431 aaPredicted RBP15.41■□□□□ 0.06
USP46-209ENST00000514536 ZNF689Q96CS4 500 aaPredicted RBP15.41■□□□□ 0.06
USP46-209ENST00000514536 FZD8Q9H461 694 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 C17orf75Q9HAS0 396 aa15.41■□□□□ 0.06
USP46-209ENST00000514536 PRMT7Q9NVM4 692 aaPredicted RBP15.41■□□□□ 0.06
USP46-209ENST00000514536 ADGRA3Q8IWK6 1321 aa15.4■□□□□ 0.06
USP46-209ENST00000514536 PTPRSQ13332 1948 aa15.4■□□□□ 0.06
USP46-209ENST00000514536 TTC3P53804 2025 aa15.4■□□□□ 0.06
USP46-209ENST00000514536 FGFR1P11362 822 aa15.4■□□□□ 0.06
USP46-209ENST00000514536 PLS3P13797 630 aa15.4■□□□□ 0.06
USP46-209ENST00000514536 ARF4P18085 180 aaPredicted RBP15.4■□□□□ 0.06
USP46-209ENST00000514536 AXLP30530 894 aa15.4■□□□□ 0.06
USP46-209ENST00000514536 DMP1Q13316 513 aaPredicted RBP15.4■□□□□ 0.06
USP46-209ENST00000514536 MAPK6Q16659 721 aa15.4■□□□□ 0.06
USP46-209ENST00000514536 LONRF3Q496Y0 759 aa15.4■□□□□ 0.06
USP46-209ENST00000514536 REEP2Q9BRK0 252 aa15.4■□□□□ 0.06
USP46-209ENST00000514536 TRAIPQ9BWF2 469 aa15.4■□□□□ 0.06
USP46-209ENST00000514536 SCAND2PQ9GZW5 306 aaPredicted RBP15.4■□□□□ 0.06
USP46-209ENST00000514536 RC3H2Q9HBD1 1191 aaKnown RBP15.4■□□□□ 0.06
USP46-209ENST00000514536 GDPD2Q9HCC8 539 aa15.4■□□□□ 0.06
USP46-209ENST00000514536 KMT5AQ9NQR1 393 aa15.4■□□□□ 0.06
USP46-209ENST00000514536 FAM105AQ9NUU6 356 aa15.4■□□□□ 0.06
USP46-209ENST00000514536 FAM13BQ9NYF5 915 aa15.4■□□□□ 0.06
USP46-209ENST00000514536 USP20Q9Y2K6 914 aa15.4■□□□□ 0.06
USP46-209ENST00000514536 K7ERI5 159 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 SLC16A4O15374 487 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 EOMESO95936 686 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 PRKCBP05771 671 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 SKIP12755 728 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 EFNA5P52803 228 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 BTG3Q14201 252 aaPredicted RBP15.39■□□□□ 0.05
USP46-209ENST00000514536 FAM187BQ17R55 369 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms