RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 AUTS2Q8WXX7 1259 aa13.67□□□□□ -0.22
SNHG4-208ENST00000514110 TMEM143Q96AN5 459 aa13.67□□□□□ -0.22
SNHG4-208ENST00000514110 TMEM169Q96HH4 297 aa13.67□□□□□ -0.22
SNHG4-208ENST00000514110 CEP170P1Q96L14 293 aa13.67□□□□□ -0.22
SNHG4-208ENST00000514110 LXNQ9BS40 222 aa13.67□□□□□ -0.22
SNHG4-208ENST00000514110 DHX33Q9H6R0 707 aaKnown RBP13.67□□□□□ -0.22
SNHG4-208ENST00000514110 NRDE2Q9H7Z3 1164 aa13.67□□□□□ -0.22
SNHG4-208ENST00000514110 MINDY3Q9H8M7 445 aa13.67□□□□□ -0.22
SNHG4-208ENST00000514110 BMP2KQ9NSY1 1161 aaPredicted RBP13.67□□□□□ -0.22
SNHG4-208ENST00000514110 AGPAT5Q9NUQ2 364 aa13.67□□□□□ -0.22
SNHG4-208ENST00000514110 TBC1D13Q9NVG8 400 aa13.67□□□□□ -0.22
SNHG4-208ENST00000514110 RGL1Q9NZL6 768 aa13.67□□□□□ -0.22
SNHG4-208ENST00000514110 HCFC2Q9Y5Z7 792 aa13.67□□□□□ -0.22
SNHG4-208ENST00000514110 TECTAO75443 2155 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 TMEM221A6NGB7 291 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 M0R296 226 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 TBX3O15119 743 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 B4GALT3O60512 393 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 DKC1O60832 514 aaKnown RBP eCLIP13.66□□□□□ -0.221e-323■■■■■ 141.5
SNHG4-208ENST00000514110 CLASP2O75122 1294 aaKnown RBP13.66□□□□□ -0.22
SNHG4-208ENST00000514110 ZNF623O75123 536 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 OFD1O75665 1012 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 CXCL14O95715 111 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 SRGAP2CP0DJJ0 459 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 SKIP12755 728 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 FDPSP14324 419 aaKnown RBP13.66□□□□□ -0.22
SNHG4-208ENST00000514110 HOXB8P17481 243 aaPredicted RBP13.66□□□□□ -0.22
SNHG4-208ENST00000514110 XBP1P17861 261 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 SP100P23497 879 aaPredicted RBP13.66□□□□□ -0.22
SNHG4-208ENST00000514110 YWHABP31946 246 aaKnown RBP13.66□□□□□ -0.22
SNHG4-208ENST00000514110 CA8P35219 290 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 RAB27AP51159 221 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 POLGP54098 1239 aaPredicted RBP13.66□□□□□ -0.22
SNHG4-208ENST00000514110 AK2P54819 239 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 SPIRE1Q08AE8 756 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 NR5A1Q13285 461 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 EPHA7Q15375 998 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 NOMO2Q5JPE7 1267 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 NCAPH2Q6IBW4 605 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 GLB1LQ6UWU2 654 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 C4orf19Q8IY42 314 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 VPS52Q8N1B4 723 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 NECAB1Q8N987 351 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 SLC7A3Q8WY07 619 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 CASP10Q92851 521 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 DYDC2Q96IM9 177 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 MFSD14AQ96MC6 490 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 ZBP1Q9H171 429 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 ORC3Q9UBD5 711 aaPredicted RBP13.66□□□□□ -0.22
SNHG4-208ENST00000514110 DNAJB4Q9UDY4 337 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 INPP5FQ9Y2H2 1132 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 PCDHB2Q9Y5E7 798 aa13.66□□□□□ -0.22
SNHG4-208ENST00000514110 MUC6Q6W4X9 2439 aa13.65□□□□□ -0.22
SNHG4-208ENST00000514110 MARCH6O60337 910 aa13.65□□□□□ -0.22
SNHG4-208ENST00000514110 LARGE1O95461 756 aa13.65□□□□□ -0.22
SNHG4-208ENST00000514110 GALTP07902 379 aa13.65□□□□□ -0.22
SNHG4-208ENST00000514110 HOXA11P31270 313 aaPredicted RBP13.65□□□□□ -0.22
SNHG4-208ENST00000514110 NHLH1Q02575 133 aa13.65□□□□□ -0.22
SNHG4-208ENST00000514110 LAMTOR4Q0VGL1 99 aa13.65□□□□□ -0.22
SNHG4-208ENST00000514110 CTTNQ14247 550 aaKnown RBP13.65□□□□□ -0.22
SNHG4-208ENST00000514110 AGMOQ6ZNB7 445 aa13.65□□□□□ -0.22
SNHG4-208ENST00000514110 BMP8AQ7Z5Y6 402 aa13.65□□□□□ -0.22
SNHG4-208ENST00000514110 DDX53Q86TM3 631 aaKnown RBP13.65□□□□□ -0.22
SNHG4-208ENST00000514110 ALYREFQ86V81 257 aaKnown RBP13.65□□□□□ -0.22
SNHG4-208ENST00000514110 ZNF280BQ86YH2 543 aa13.65□□□□□ -0.22
SNHG4-208ENST00000514110 PSPC1Q8WXF1 523 aaKnown RBP13.65□□□□□ -0.22
SNHG4-208ENST00000514110 TNFRSF25Q93038 417 aa13.65□□□□□ -0.22
SNHG4-208ENST00000514110 PBXIP1Q96AQ6 731 aa13.65□□□□□ -0.22
SNHG4-208ENST00000514110 IGSF21Q96ID5 467 aa13.65□□□□□ -0.22
SNHG4-208ENST00000514110 VN1R3Q9BXE9 311 aa13.65□□□□□ -0.22
SNHG4-208ENST00000514110 GBP3Q9H0R5 595 aa13.65□□□□□ -0.22
SNHG4-208ENST00000514110 KCNH6Q9H252 994 aa13.65□□□□□ -0.22
SNHG4-208ENST00000514110 PPME1Q9Y570 386 aa13.65□□□□□ -0.22
SNHG4-208ENST00000514110 ARID2Q68CP9 1835 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.64□□□□□ -0.23
SNHG4-208ENST00000514110 KRT2P35908 639 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 RFC5P40937 340 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 SLC11A1P49279 550 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 AFF1P51825 1210 aaKnown RBP13.64□□□□□ -0.23
SNHG4-208ENST00000514110 ANAPC15P60006 121 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 CYP4A11Q02928 519 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 RNASELQ05823 741 aaKnown RBP13.64□□□□□ -0.23
SNHG4-208ENST00000514110 EMC2Q15006 297 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 ME3Q16798 604 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 TPRNQ4KMQ1 711 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 XKR9Q5GH70 373 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 UBXN11Q5T124 520 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 OTUD6AQ7L8S5 288 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 SRGAP1Q7Z6B7 1085 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 MRPL10Q7Z7H8 261 aaKnown RBP13.64□□□□□ -0.23
SNHG4-208ENST00000514110 EXOC8Q8IYI6 725 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 C12orf76Q8N812 135 aaPredicted RBP13.64□□□□□ -0.23
SNHG4-208ENST00000514110 RSPH1Q8WYR4 309 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 NAP1L4Q99733 375 aaKnown RBP13.64□□□□□ -0.23
SNHG4-208ENST00000514110 ADAM7Q9H2U9 754 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 POMKQ9H5K3 350 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 ZNF318Q5VUA4 2279 aa13.64□□□□□ -0.23
SNHG4-208ENST00000514110 WNT7AO00755 349 aa13.63□□□□□ -0.23
SNHG4-208ENST00000514110 DDHD2O94830 711 aa13.63□□□□□ -0.23
SNHG4-208ENST00000514110 SLITRK3O94933 977 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms