RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-223ENST00000513495 SFR1Q86XK3 245 aa17.35■□□□□ 0.37
SH3TC1-223ENST00000513495 IFNLR1Q8IU57 520 aaPredicted RBP17.35■□□□□ 0.37
SH3TC1-223ENST00000513495 GPT2Q8TD30 523 aa17.35■□□□□ 0.37
SH3TC1-223ENST00000513495 BSNDQ8WZ55 320 aa17.35■□□□□ 0.37
SH3TC1-223ENST00000513495 ZNF668Q96K58 619 aaPredicted RBP17.35■□□□□ 0.37
SH3TC1-223ENST00000513495 GSDMAQ96QA5 445 aa17.35■□□□□ 0.37
SH3TC1-223ENST00000513495 NTPCRQ9BSD7 190 aaKnown RBP17.35■□□□□ 0.37
SH3TC1-223ENST00000513495 OLFML3Q9NRN5 406 aa17.35■□□□□ 0.37
SH3TC1-223ENST00000513495 ZMYND8Q9ULU4 1186 aaPredicted RBP17.35■□□□□ 0.37
SH3TC1-223ENST00000513495 SLC16A4O15374 487 aa17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 PFKMP08237 780 aa17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 GHRP10912 638 aa17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 CASP1P29466 404 aa17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 FPGSQ05932 587 aa17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 CAMK4Q16566 473 aa17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 MAPK6Q16659 721 aa17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 UMODL1Q5DID0 1318 aa17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 FBXO47Q5MNV8 452 aa17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 FAM26FQ5R3K3 315 aa17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 CDCA2Q69YH5 1023 aaPredicted RBP17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 CATSPER4Q7RTX7 472 aa17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 SEPT8Q92599 483 aa17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 SCLYQ96I15 445 aa17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 WNT8AQ9H1J5 351 aa17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 IFT122Q9HBG6 1241 aa17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 PRMT7Q9NVM4 692 aaPredicted RBP17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 PCDHB13Q9Y5F0 798 aa17.34■□□□□ 0.37
SH3TC1-223ENST00000513495 KIF20AO95235 890 aa17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 GCNT3O95395 438 aa17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 PRR29P0C7W0 189 aa17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 SYN1P17600 705 aa17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 NCKAP1LP55160 1127 aa17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 MDM2Q00987 491 aaPredicted RBP17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 KCNB1Q14721 858 aa17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 KMT5BQ4FZB7 885 aa17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 CCDC183Q5T5S1 534 aa17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 HAUS6Q7Z4H7 955 aa17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 APBB2Q92870 758 aa17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 HVCN1Q96D96 273 aa17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 PRIMPOLQ96LW4 560 aa17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 IFIH1Q9BYX4 1025 aaKnown RBP17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 TMEM134Q9H6X4 195 aa17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 CDHR5Q9HBB8 845 aa17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 TBC1D7Q9P0N9 293 aa17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 EXOC7Q9UPT5 735 aa17.33■□□□□ 0.36
SH3TC1-223ENST00000513495 DENND3A2RUS2 1198 aa17.32■□□□□ 0.36
SH3TC1-223ENST00000513495 ACTN1P12814 892 aa17.32■□□□□ 0.36
SH3TC1-223ENST00000513495 MLLT1Q03111 559 aaPredicted RBP17.32■□□□□ 0.36
SH3TC1-223ENST00000513495 NFX1Q12986 1120 aaKnown RBP17.32■□□□□ 0.36
SH3TC1-223ENST00000513495 LPIN1Q14693 890 aa17.32■□□□□ 0.36
SH3TC1-223ENST00000513495 NFKBIBQ15653 356 aa17.32■□□□□ 0.36
SH3TC1-223ENST00000513495 KLHL40Q2TBA0 621 aa17.32■□□□□ 0.36
SH3TC1-223ENST00000513495 TRAF7Q6Q0C0 670 aa17.32■□□□□ 0.36
SH3TC1-223ENST00000513495 APBB1IPQ7Z5R6 666 aaPredicted RBP17.32■□□□□ 0.36
SH3TC1-223ENST00000513495 DEFB128Q7Z7B8 93 aa17.32■□□□□ 0.36
SH3TC1-223ENST00000513495 BADQ92934 168 aa17.32■□□□□ 0.36
SH3TC1-223ENST00000513495 KIFC3Q9BVG8 833 aa17.32■□□□□ 0.36
SH3TC1-223ENST00000513495 ST6GALNAC4Q9H4F1 302 aa17.32■□□□□ 0.36
SH3TC1-223ENST00000513495 ARHGAP28Q9P2N2 729 aa17.32■□□□□ 0.36
SH3TC1-223ENST00000513495 NOC2LQ9Y3T9 749 aaKnown RBP17.32■□□□□ 0.36
SH3TC1-223ENST00000513495 PCDHA5Q9Y5H7 936 aa17.32■□□□□ 0.36
SH3TC1-223ENST00000513495 BRCA2P51587 3418 aa17.32■□□□□ 0.36
SH3TC1-223ENST00000513495 RHOBTB3O94955 611 aa17.31■□□□□ 0.36
SH3TC1-223ENST00000513495 PRKCBP05771 671 aa17.31■□□□□ 0.36
SH3TC1-223ENST00000513495 CSF2RAP15509 400 aa17.31■□□□□ 0.36
SH3TC1-223ENST00000513495 ZSCAN20P17040 1043 aaPredicted RBP17.31■□□□□ 0.36
SH3TC1-223ENST00000513495 CD52P31358 61 aa17.31■□□□□ 0.36
SH3TC1-223ENST00000513495 MBTD1Q05BQ5 628 aa17.31■□□□□ 0.36
SH3TC1-223ENST00000513495 PRPF4BQ13523 1007 aaKnown RBP17.31■□□□□ 0.36
SH3TC1-223ENST00000513495 ZNF720Q7Z2F6 126 aa17.31■□□□□ 0.36
SH3TC1-223ENST00000513495 TMEM161BQ8NDZ6 487 aa17.31■□□□□ 0.36
SH3TC1-223ENST00000513495 TMEM40Q8WWA1 233 aa17.31■□□□□ 0.36
SH3TC1-223ENST00000513495 BICD1Q96G01 975 aa17.31■□□□□ 0.36
SH3TC1-223ENST00000513495 FTHL17Q9BXU8 183 aa17.31■□□□□ 0.36
SH3TC1-223ENST00000513495 IL23AQ9NPF7 189 aa17.31■□□□□ 0.36
SH3TC1-223ENST00000513495 ST3GAL5Q9UNP4 418 aa17.31■□□□□ 0.36
SH3TC1-223ENST00000513495 UBE4BO95155 1302 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 ADGRA3Q8IWK6 1321 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 ACKR2O00590 384 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 EIF3DO15371 548 aaKnown RBP eCLIP17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 KLRC4O43908 158 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 NBNO60934 754 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 CXCL10P02778 98 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 NMT1P30419 496 aaKnown RBP17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 AXLP30530 894 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 MBTPS1Q14703 1052 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 FAM187BQ17R55 369 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 PSRC1Q6PGN9 363 aaPredicted RBP17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 PPP4R3CPQ6ZMV5 832 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 FAM228AQ86W67 206 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 SYCP3Q8IZU3 236 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 TRIML1Q8N9V2 468 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 ACCSQ96QU6 501 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 MRPL4Q9BYD3 311 aaKnown RBP17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 TMEM206Q9H813 350 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 CHST12Q9NRB3 414 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 KIAA1468Q9P260 1216 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 PADI3Q9ULW8 664 aa17.3■□□□□ 0.36
SH3TC1-223ENST00000513495 TBX20Q9UMR3 447 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms