RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 SH3RF3Q8TEJ3 882 aaPredicted RBP12.03□□□□□ -0.48
TCOF1-211ENST00000513346 TRIM51Q9BSJ1 452 aa12.03□□□□□ -0.48
TCOF1-211ENST00000513346 NRBP2Q9NSY0 501 aa12.03□□□□□ -0.48
TCOF1-211ENST00000513346 PITPNM2Q9BZ72 1349 aa12.02□□□□□ -0.48
TCOF1-211ENST00000513346 hCG_1984214I3L0E3 225 aa12.02□□□□□ -0.48
TCOF1-211ENST00000513346 CLIC2O15247 247 aa12.02□□□□□ -0.48
TCOF1-211ENST00000513346 FGFR4P22455 802 aa12.02□□□□□ -0.48
TCOF1-211ENST00000513346 NSFP46459 744 aaKnown RBP12.02□□□□□ -0.48
TCOF1-211ENST00000513346 NAB2Q15742 525 aa12.02□□□□□ -0.48
TCOF1-211ENST00000513346 CCDC92Q53HC0 331 aaPredicted RBP12.02□□□□□ -0.48
TCOF1-211ENST00000513346 CCDC137Q6PK04 289 aaKnown RBP12.02□□□□□ -0.48
TCOF1-211ENST00000513346 DPP9Q86TI2 863 aa12.02□□□□□ -0.48
TCOF1-211ENST00000513346 MAP7D3Q8IWC1 876 aa12.02□□□□□ -0.48
TCOF1-211ENST00000513346 ZNF713Q8N859 430 aaPredicted RBP12.02□□□□□ -0.48
TCOF1-211ENST00000513346 ERP27Q96DN0 273 aa12.02□□□□□ -0.48
TCOF1-211ENST00000513346 CHCHD3Q9NX63 227 aaKnown RBP12.02□□□□□ -0.48
TCOF1-211ENST00000513346 ETAA1Q9NY74 926 aa12.02□□□□□ -0.48
TCOF1-211ENST00000513346 PLAGL2Q9UPG8 496 aa12.02□□□□□ -0.48
TCOF1-211ENST00000513346 COL3A1P02461 1466 aaPredicted RBP12.02□□□□□ -0.48
TCOF1-211ENST00000513346 POLGP54098 1239 aaPredicted RBP12.02□□□□□ -0.49
TCOF1-211ENST00000513346 CACNB3P54284 484 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 PHEXP78562 749 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 NFIXQ14938 502 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 CASC4Q6P4E1 433 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 SLC44A5Q8NCS7 719 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 GFM2Q969S9 779 aaKnown RBP12.02□□□□□ -0.49
TCOF1-211ENST00000513346 ERGIC2Q96RQ1 377 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 PLA2G12BQ9BX93 195 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 DCP1AQ9NPI6 582 aaPredicted RBP12.02□□□□□ -0.49
TCOF1-211ENST00000513346 PDP2Q9P2J9 529 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 CAPN6Q9Y6Q1 641 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 LRRIQ4A6NIV6 560 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 GSTA2P09210 222 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 FCER1AP12319 257 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 MFAP3P55082 362 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 ODR4Q5SWX8 454 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 KRT80Q6KB66 452 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 RNF207Q6ZRF8 634 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 ENAHQ8N8S7 591 aaPredicted RBP12.02□□□□□ -0.49
TCOF1-211ENST00000513346 MORC4Q8TE76 937 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 MAP3K14Q99558 947 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 ADPGKQ9BRR6 497 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 ZNF577Q9BSK1 485 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 SAYSD1Q9NPB0 183 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 DBR1Q9UK59 544 aaKnown RBP12.02□□□□□ -0.49
TCOF1-211ENST00000513346 ZNF711Q9Y462 761 aa12.02□□□□□ -0.49
TCOF1-211ENST00000513346 PP2D1A8MPX8 630 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 NMT2O60551 498 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 ACADSP16219 412 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 MARK3P27448 753 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 ATG16L1Q676U5 607 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 CENPUQ71F23 418 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 IGDCC4Q8TDY8 1250 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 TRIM11Q96F44 468 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 FAM84BQ96KN1 310 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-211ENST00000513346 LRGUKQ96M69 825 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 CPVLQ9H3G5 476 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 MAP2P11137 1827 aaKnown RBP12.01□□□□□ -0.49
TCOF1-211ENST00000513346 SGK1O00141 431 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 IPO5O00410 1097 aaKnown RBP12.01□□□□□ -0.49
TCOF1-211ENST00000513346 PLA2G4BP0C869 781 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 P4HA1P13674 534 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 VHLP40337 213 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 NT5C2P49902 561 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 SYDE2Q5VT97 1194 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 TRMT10CQ7L0Y3 403 aaKnown RBP12.01□□□□□ -0.49
TCOF1-211ENST00000513346 PROCA1Q8NCQ7 364 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-211ENST00000513346 DTX3LQ8TDB6 740 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 CCDC127Q96BQ5 260 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 KAZALD1Q96I82 304 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 HIC2Q96JB3 615 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 FAM129AQ9BZQ8 928 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 ROPN1BQ9BZX4 212 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-211ENST00000513346 ROPN1Q9HAT0 212 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-211ENST00000513346 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 GAP43P17677 238 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 DMP1Q13316 513 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-211ENST00000513346 NBPF20Q3BBV1 942 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 RNF169Q8NCN4 708 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 RFFLQ8WZ73 363 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 ANKS1AQ92625 1134 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 ATP6V0A1Q93050 837 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 MXD3Q9BW11 206 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 CCSER1Q9C0I3 900 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 CCDC22O60826 627 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 GGPS1O95749 300 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 CSF1RP07333 972 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 WDR11Q9BZH6 1224 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 TRIM9Q9C026 710 aa12.01□□□□□ -0.49
TCOF1-211ENST00000513346 NEURL4Q96JN8 1562 aa12□□□□□ -0.49
TCOF1-211ENST00000513346 TMEM120BA0PK00 339 aa12□□□□□ -0.49
TCOF1-211ENST00000513346 CRKP46108 304 aa12□□□□□ -0.49
TCOF1-211ENST00000513346 YWHAEP62258 255 aaKnown RBP12□□□□□ -0.49
TCOF1-211ENST00000513346 CDK17Q00537 523 aa12□□□□□ -0.49
TCOF1-211ENST00000513346 MDM2Q00987 491 aaPredicted RBP12□□□□□ -0.49
TCOF1-211ENST00000513346 COL23A1Q86Y22 540 aaPredicted RBP12□□□□□ -0.49
TCOF1-211ENST00000513346 TAB3Q8N5C8 712 aaPredicted RBP12□□□□□ -0.49
TCOF1-211ENST00000513346 GIMAP8Q8ND71 665 aaPredicted RBP12□□□□□ -0.49
TCOF1-211ENST00000513346 TTC25Q96NG3 672 aa12□□□□□ -0.49
TCOF1-211ENST00000513346 TRAIPQ9BWF2 469 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms