RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 RPA1P27694 616 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 CST5P28325 142 aaPredicted RBP10.43□□□□□ -0.74
MSH3-203ENST00000512531 STAT3P40763 770 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 ZBED6P86452 979 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 USH1GQ495M9 461 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 CCDC40Q4G0X9 1142 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 PRR16Q569H4 304 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 FAM26FQ5R3K3 315 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 PRAMEF19Q5SWL8 479 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 CENPPQ6IPU0 288 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 CCDC174Q6PII3 467 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 MAMDC4Q6UXC1 1216 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 RASGRP2Q7LDG7 609 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 CLEC10AQ8IUN9 316 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 CEP112Q8N8E3 955 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 FAM161BQ96MY7 647 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 L2HGDHQ9H9P8 463 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 TUFT1Q9NNX1 390 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 IGSF5Q9NSI5 407 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 KCND2Q9NZV8 630 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 TSR3Q9UJK0 312 aaKnown RBP10.43□□□□□ -0.74
MSH3-203ENST00000512531 ZNF214Q9UL59 606 aaPredicted RBP10.43□□□□□ -0.74
MSH3-203ENST00000512531 PRR12Q9ULL5 1215 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 CAPN11Q9UMQ6 739 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 MAPK8IP1Q9UQF2 711 aa10.43□□□□□ -0.74
MSH3-203ENST00000512531 MROH7Q68CQ1 1323 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 A0A1W2PQ45 241 aaPredicted RBP10.42□□□□□ -0.74
MSH3-203ENST00000512531 A0A1W2PQY0 241 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 CTAGE9A4FU28 777 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 DCDC2CA8MYV0 355 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 CETN3O15182 167 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 KRT86O43790 486 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 PPP1R11O60927 126 aaPredicted RBP10.42□□□□□ -0.74
MSH3-203ENST00000512531 ADAMTS4O75173 837 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 FOSL2P15408 326 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 RAG1P15918 1043 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 FPGSQ05932 587 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 VWA3BQ502W6 1294 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 NCAPH2Q6IBW4 605 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 IQCEQ6IPM2 695 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 USP17L6PQ6QN14 398 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 DYMQ7RTS9 669 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 APTXQ7Z2E3 356 aaKnown RBP10.42□□□□□ -0.74
MSH3-203ENST00000512531 KIAA1328Q86T90 577 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 GPBP1Q86WP2 473 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 KLHDC9Q8NEP7 349 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 ANKK1Q8NFD2 765 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 REPS2Q8NFH8 660 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 RNPC3Q96LT9 517 aaKnown RBP10.42□□□□□ -0.74
MSH3-203ENST00000512531 PNMA5Q96PV4 448 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 ERGIC2Q96RQ1 377 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 MMTAG2Q9BU76 263 aaKnown RBP10.42□□□□□ -0.74
MSH3-203ENST00000512531 POLR3CQ9BUI4 534 aaPredicted RBP10.42□□□□□ -0.74
MSH3-203ENST00000512531 MAF1Q9H063 256 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 RANBP17Q9H2T7 1088 aaKnown RBP10.42□□□□□ -0.74
MSH3-203ENST00000512531 HAUS4Q9H6D7 363 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 SLC39A2Q9NP94 309 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 BLOC1S4Q9NUP1 217 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 COL4A3BPQ9Y5P4 624 aa10.42□□□□□ -0.74
MSH3-203ENST00000512531 UBE4BO95155 1302 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 DNAJC25-GNG10A0A024R161 153 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 RBM47A0AV96 593 aaKnown RBP10.41□□□□□ -0.74
MSH3-203ENST00000512531 MYMKA6NI61 221 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 EFCAB8A8MWE9 144 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 MEIS2O14770 477 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 ADAMTS3O15072 1205 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 TLL1O43897 1013 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 DUSP11O75319 330 aaKnown RBP10.41□□□□□ -0.74
MSH3-203ENST00000512531 GYPCP04921 128 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 ACLYP53396 1101 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 NKX3-2P78367 333 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 RBM10P98175 930 aaKnown RBP10.41□□□□□ -0.74
MSH3-203ENST00000512531 CDK17Q00537 523 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 STK4Q13043 487 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 COASYQ13057 564 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 EDRF1Q3B7T1 1238 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 HERC4Q5GLZ8 1057 aaPredicted RBP10.41□□□□□ -0.74
MSH3-203ENST00000512531 ANKRD40Q6AI12 368 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 CCSAPQ6IQ19 270 aaPredicted RBP10.41□□□□□ -0.74
MSH3-203ENST00000512531 CCDC70Q6NSX1 233 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 CACNA2D4Q7Z3S7 1137 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 TMEM139Q8IV31 216 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 REXO1L1PQ8IX06 675 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 SPICE1Q8N0Z3 855 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 NEK11Q8NG66 645 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 MYLIPQ8WY64 445 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 HAS1Q92839 578 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 KIFC2Q96AC6 838 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 SPSB2Q99619 263 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 TEX13BQ9BXU2 312 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 SEZ6LQ9BYH1 1024 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 DEF6Q9H4E7 631 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 METTL14Q9HCE5 456 aaKnown RBP10.41□□□□□ -0.74
MSH3-203ENST00000512531 PRDM6Q9NQX0 595 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 TMEM39AQ9NV64 488 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 KIAA1522Q9P206 1035 aaPredicted RBP10.41□□□□□ -0.74
MSH3-203ENST00000512531 SEL1LQ9UBV2 794 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 MYH7BA7E2Y1 1941 aa10.41□□□□□ -0.74
MSH3-203ENST00000512531 TRIM49BA6NDI0 452 aa10.4□□□□□ -0.74
MSH3-203ENST00000512531 DKC1O60832 514 aaKnown RBP eCLIP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms