RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 KIFAP3Q92845 792 aa14.36□□□□□ -0.11
DEPDC1B-206ENST00000512452 KCNN1Q92952 543 aa14.36□□□□□ -0.11
DEPDC1B-206ENST00000512452 ACCSQ96QU6 501 aa14.36□□□□□ -0.11
DEPDC1B-206ENST00000512452 EIF3CQ99613 913 aaKnown RBP14.36□□□□□ -0.11
DEPDC1B-206ENST00000512452 TUBB2BQ9BVA1 445 aa14.36□□□□□ -0.11
DEPDC1B-206ENST00000512452 MMRN2Q9H8L6 949 aa14.36□□□□□ -0.11
DEPDC1B-206ENST00000512452 FBXL5Q9UKA1 691 aa14.36□□□□□ -0.11
DEPDC1B-206ENST00000512452 PNMA3Q9UL41 463 aa14.36□□□□□ -0.11
DEPDC1B-206ENST00000512452 MYO6Q9UM54 1294 aa14.36□□□□□ -0.11
DEPDC1B-206ENST00000512452 SLC45A1Q9Y2W3 748 aa14.36□□□□□ -0.11
DEPDC1B-206ENST00000512452 PPME1Q9Y570 386 aa14.36□□□□□ -0.11
DEPDC1B-206ENST00000512452 LCTP09848 1927 aa14.36□□□□□ -0.11
DEPDC1B-206ENST00000512452 TCF20Q9UGU0 1960 aaKnown RBP14.36□□□□□ -0.11
DEPDC1B-206ENST00000512452 SFI1A8K8P3 1242 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 H0YCG3 227 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 MAPK13O15264 365 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 KIF5CO60282 957 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 AKAP3O75969 853 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 ATG7O95352 703 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 SUPT20HL2P0C7V6 817 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 FLT3LGP49771 235 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 NCKAP1LP55160 1127 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 ACTR2P61160 394 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 GTF2BQ00403 316 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 NHLH1Q02575 133 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 KCNMA1Q12791 1236 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 KCNH2Q12809 1159 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 UGCGQ16739 394 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 ARHGAP29Q52LW3 1261 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 XKR9Q5GH70 373 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 PDXDC1Q6P996 788 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 SPIRE2Q8WWL2 714 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 BAP1Q92560 729 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 BORCS6Q96GS4 357 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 DESI2Q9BSY9 194 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 MROH8Q9H579 483 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 HAUS4Q9H6D7 363 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 AGPAT3Q9NRZ7 376 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 IGSF9BQ9UPX0 1349 aa14.35□□□□□ -0.11
DEPDC1B-206ENST00000512452 SSU72P8A0A1W2PR75 194 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 K7ENM7 598 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 BACH1O14867 736 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 USO1O60763 962 aaKnown RBP14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 DGAT1O75907 488 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 STBD1O95210 358 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 CASQ1P31415 396 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 KLK7P49862 253 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 SMTNP53814 917 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 MCCD1P59942 119 aaPredicted RBP14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 GNG11P61952 73 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 NEDD9Q14511 834 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 XKR3Q5GH77 459 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 GPAT2Q6NUI2 795 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 CACNA2D4Q7Z3S7 1137 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 NCAPG2Q86XI2 1143 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 FAM186BQ8IYM0 893 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 EHBP1Q8NDI1 1231 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 CHP1Q99653 195 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 NTPCRQ9BSD7 190 aaKnown RBP14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 C11orf16Q9NQ32 467 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 FAM207AQ9NSI2 230 aaPredicted RBP14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 GABBR1Q9UBS5 961 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 DNAI1Q9UI46 699 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 EXOC7Q9UPT5 735 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 FRMD4BQ9Y2L6 1034 aa14.34□□□□□ -0.11
DEPDC1B-206ENST00000512452 FAM86C2PA6NEL3 165 aa14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 NKRFO15226 690 aaKnown RBP eCLIP14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 SLU7O95391 586 aaKnown RBP14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 LCA5LO95447 670 aa14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 BMP1P13497 986 aa14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 ANXA13P27216 316 aa14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 ENPEPQ07075 957 aa14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 HSP90AA2PQ14568 343 aaPredicted RBP14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 ZC2HC1CQ53FD0 456 aaPredicted RBP14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 GBP6Q6ZN66 633 aa14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 ANO5Q75V66 913 aa14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 FMNL3Q8IVF7 1028 aa14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 SYCP3Q8IZU3 236 aa14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 SMCR8Q8TEV9 937 aaPredicted RBP14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 SLC35C1Q96A29 364 aa14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 LSM14BQ9BX40 385 aaKnown RBP14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 TSGA10Q9BZW7 698 aa14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 NHEJ1Q9H9Q4 299 aaPredicted RBP14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 KIAA1217Q5T5P2 1943 aa14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 MYH11P35749 1972 aa14.33□□□□□ -0.12
DEPDC1B-206ENST00000512452 CDH23Q9H251 3354 aa14.32□□□□□ -0.12
DEPDC1B-206ENST00000512452 DNAJC25-GNG10A0A024R161 153 aa14.32□□□□□ -0.12
DEPDC1B-206ENST00000512452 IGKV6D-21A0A0A0MT36 114 aa14.32□□□□□ -0.12
DEPDC1B-206ENST00000512452 SOWAHBA6NEL2 793 aa14.32□□□□□ -0.12
DEPDC1B-206ENST00000512452 NOL4O94818 638 aa14.32□□□□□ -0.12
DEPDC1B-206ENST00000512452 ERCC3P19447 782 aa14.32□□□□□ -0.12
DEPDC1B-206ENST00000512452 CNTN2Q02246 1040 aa14.32□□□□□ -0.12
DEPDC1B-206ENST00000512452 KCNA1Q09470 495 aa14.32□□□□□ -0.12
DEPDC1B-206ENST00000512452 DMP1Q13316 513 aaPredicted RBP14.32□□□□□ -0.12
DEPDC1B-206ENST00000512452 IRF5Q13568 498 aa14.32□□□□□ -0.12
DEPDC1B-206ENST00000512452 SPA17Q15506 151 aa14.32□□□□□ -0.12
DEPDC1B-206ENST00000512452 EXOC3L4Q17RC7 722 aa14.32□□□□□ -0.12
DEPDC1B-206ENST00000512452 C9orf50Q5SZB4 431 aa14.32□□□□□ -0.12
DEPDC1B-206ENST00000512452 SWSAP1Q6NVH7 229 aa14.32□□□□□ -0.12
DEPDC1B-206ENST00000512452 RRAGAQ7L523 313 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms