RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 IRAK3Q9Y616 596 aa7.35□□□□□ -1.23
CLDND1-225ENST00000512147 FOCADQ5VW36 1801 aa7.35□□□□□ -1.23
CLDND1-225ENST00000512147 MYH15Q9Y2K3 1946 aa7.35□□□□□ -1.23
CLDND1-225ENST00000512147 CCDC163A0A0D9SF12 145 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 FOXP2O15409 715 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 SGSM2O43147 1006 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 GPAA1O43292 621 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 PRKAB2O43741 272 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 PPFIA4O75335 1185 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 KRT10P13645 584 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 AKR1B1P15121 316 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 NFATC3Q12968 1075 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 GAS6Q14393 721 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 LY6KQ17RY6 165 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 PKDCCQ504Y2 493 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 TSHZ1Q6ZSZ6 1077 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 TOGARAM2Q6ZUX3 1019 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 TMPRSS7Q7RTY8 843 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 CERS3Q8IU89 383 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 VPS52Q8N1B4 723 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 RUFY2Q8WXA3 655 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 FAM3CQ92520 227 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 CCDC17Q96LX7 622 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 ESYT1Q9BSJ8 1104 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 DUSP15Q9H1R2 295 aaPredicted RBP7.34□□□□□ -1.23
CLDND1-225ENST00000512147 RNPEPQ9H4A4 650 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 FEM1BQ9UK73 627 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 SLC4A4Q9Y6R1 1079 aa7.34□□□□□ -1.23
CLDND1-225ENST00000512147 ICE1Q9Y2F5 2266 aa7.34□□□□□ -1.24
CLDND1-225ENST00000512147 CCDC171Q6TFL3 1326 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 MYH7P12883 1935 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 LAMA1P25391 3075 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 NAV1Q8NEY1 1877 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 GSG1L2A8MUP6 293 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 PATE3B3GLJ2 98 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 PATL2C9JE40 543 aaKnown RBP7.33□□□□□ -1.24
CLDND1-225ENST00000512147 INPPL1O15357 1258 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 ZMYND10O75800 440 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 C8BP07358 591 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 HSPD1P10809 573 aaKnown RBP7.33□□□□□ -1.24
CLDND1-225ENST00000512147 GNAT2P19087 354 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 CD52P31358 61 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 PBX3P40426 434 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 SARSP49591 514 aaKnown RBP7.33□□□□□ -1.24
CLDND1-225ENST00000512147 KLRC3Q07444 240 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 BAATQ14032 418 aaPredicted RBP7.33□□□□□ -1.24
CLDND1-225ENST00000512147 FBXO47Q5MNV8 452 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 FAM102BQ5T8I3 360 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 VPS53Q5VIR6 699 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 CCDC62Q6P9F0 684 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 CASC1Q6TDU7 716 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 RSPH3Q86UC2 560 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 FAM26EQ8N5C1 309 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 SDR42E1Q8WUS8 393 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 AUTS2Q8WXX7 1259 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 NUSAP1Q9BXS6 441 aaKnown RBP7.33□□□□□ -1.24
CLDND1-225ENST00000512147 EMILIN2Q9BXX0 1053 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 CRNKL1Q9BZJ0 848 aaKnown RBP7.33□□□□□ -1.24
CLDND1-225ENST00000512147 DCP1AQ9NPI6 582 aaPredicted RBP7.33□□□□□ -1.24
CLDND1-225ENST00000512147 SWAP70Q9UH65 585 aa7.33□□□□□ -1.24
CLDND1-225ENST00000512147 GOLGA4Q13439 2230 aaKnown RBP7.33□□□□□ -1.24
CLDND1-225ENST00000512147 APPP05067 770 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 SMIM10L2AP0DMW4 78 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 SMIM10L2BP0DMW5 78 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 CHRNB1P11230 501 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 GRNP28799 593 aaKnown RBP7.32□□□□□ -1.24
CLDND1-225ENST00000512147 HOXC8P31273 242 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 PXNP49023 591 aaPredicted RBP7.32□□□□□ -1.24
CLDND1-225ENST00000512147 CLCN4P51793 760 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 ATXN3P54252 364 aaPredicted RBP7.32□□□□□ -1.24
CLDND1-225ENST00000512147 MFAP1P55081 439 aaKnown RBP7.32□□□□□ -1.24
CLDND1-225ENST00000512147 PTH1RQ03431 593 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 LAMC2Q13753 1193 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 LRRC32Q14392 662 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 ALX1Q15699 326 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 C8orf34Q49A92 452 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 PREPLQ4J6C6 727 aaPredicted RBP7.32□□□□□ -1.24
CLDND1-225ENST00000512147 MUM1L1Q5H9M0 696 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 GIMAP6Q6P9H5 292 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 SRRM1Q8IYB3 904 aaKnown RBP7.32□□□□□ -1.24
CLDND1-225ENST00000512147 IFNL3Q8IZI9 196 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 PPTC7Q8NI37 304 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 LSG1Q9H089 658 aaKnown RBP7.32□□□□□ -1.24
CLDND1-225ENST00000512147 EPB41L4AQ9HCS5 686 aaPredicted RBP7.32□□□□□ -1.24
CLDND1-225ENST00000512147 ATP8A2Q9NTI2 1148 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 CDH7Q9ULB5 785 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 MGAQ8IWI9 3026 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 NID2Q14112 1375 aa7.32□□□□□ -1.24
CLDND1-225ENST00000512147 SVILO95425 2214 aa7.31□□□□□ -1.24
CLDND1-225ENST00000512147 PTPDC1A2A3K4 754 aa7.31□□□□□ -1.24
CLDND1-225ENST00000512147 LUC7L3O95232 432 aaKnown RBP7.31□□□□□ -1.24
CLDND1-225ENST00000512147 NDUFB10O96000 172 aa7.31□□□□□ -1.24
CLDND1-225ENST00000512147 FGAP02671 866 aa7.31□□□□□ -1.24
CLDND1-225ENST00000512147 C8AP07357 584 aa7.31□□□□□ -1.24
CLDND1-225ENST00000512147 CTSAP10619 480 aa7.31□□□□□ -1.24
CLDND1-225ENST00000512147 FSHRP23945 695 aa7.31□□□□□ -1.24
CLDND1-225ENST00000512147 PTGDRQ13258 359 aa7.31□□□□□ -1.24
CLDND1-225ENST00000512147 ZNF746Q6NUN9 644 aaPredicted RBP7.31□□□□□ -1.24
CLDND1-225ENST00000512147 CTR9Q6PD62 1173 aa7.31□□□□□ -1.24
CLDND1-225ENST00000512147 SEPT14Q6ZU15 432 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms