RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 IRS1P35568 1242 aa18.32■□□□□ 0.52
DDX41-213ENST00000512027 PTENP60484 403 aa18.32■□□□□ 0.52
DDX41-213ENST00000512027 MRPS5P82675 430 aaKnown RBP18.32■□□□□ 0.52
DDX41-213ENST00000512027 MXD4Q14582 209 aaPredicted RBP18.32■□□□□ 0.52
DDX41-213ENST00000512027 TIGD5Q53EQ6 642 aa18.32■□□□□ 0.52
DDX41-213ENST00000512027 PADI6Q6TGC4 694 aa18.32■□□□□ 0.52
DDX41-213ENST00000512027 FAM43BQ6ZT52 329 aaPredicted RBP18.32■□□□□ 0.52
DDX41-213ENST00000512027 COLGALT1Q8NBJ5 622 aa18.32■□□□□ 0.52
DDX41-213ENST00000512027 SPPL3Q8TCT6 385 aa18.32■□□□□ 0.52
DDX41-213ENST00000512027 P2RX5Q93086 422 aa18.32■□□□□ 0.52
DDX41-213ENST00000512027 HLA-CQ95604 372 aa18.32■□□□□ 0.52
DDX41-213ENST00000512027 CPB2Q96IY4 423 aa18.32■□□□□ 0.52
DDX41-213ENST00000512027 PLVAPQ9BX97 442 aa18.32■□□□□ 0.52
DDX41-213ENST00000512027 FAM105AQ9NUU6 356 aa18.32■□□□□ 0.52
DDX41-213ENST00000512027 DDX19AQ9NUU7 478 aaKnown RBP18.32■□□□□ 0.52
DDX41-213ENST00000512027 RNF216Q9NWF9 866 aaPredicted RBP18.32■□□□□ 0.52
DDX41-213ENST00000512027 KIAA1024Q9UPX6 916 aa18.32■□□□□ 0.52
DDX41-213ENST00000512027 ARHGEF35A5YM69 484 aa18.31■□□□□ 0.52
DDX41-213ENST00000512027 E9PMD0 336 aa18.31■□□□□ 0.52
DDX41-213ENST00000512027 INO80B-WBP1J3KQ70 363 aa18.31■□□□□ 0.52
DDX41-213ENST00000512027 TSPAN1O60635 241 aa18.31■□□□□ 0.52
DDX41-213ENST00000512027 ATP2C1P98194 919 aaPredicted RBP18.31■□□□□ 0.52
DDX41-213ENST00000512027 MBTD1Q05BQ5 628 aa18.31■□□□□ 0.52
DDX41-213ENST00000512027 UBXN11Q5T124 520 aa18.31■□□□□ 0.52
DDX41-213ENST00000512027 DTHD1Q6ZMT9 781 aa18.31■□□□□ 0.52
DDX41-213ENST00000512027 ABI1Q8IZP0 508 aa18.31■□□□□ 0.52
DDX41-213ENST00000512027 POF1BQ8WVV4 589 aa18.31■□□□□ 0.52
DDX41-213ENST00000512027 BSNDQ8WZ55 320 aa18.31■□□□□ 0.52
DDX41-213ENST00000512027 MMTAG2Q9BU76 263 aaKnown RBP18.31■□□□□ 0.52
DDX41-213ENST00000512027 BHMT2Q9H2M3 363 aa18.31■□□□□ 0.52
DDX41-213ENST00000512027 NSUN3Q9H649 340 aaKnown RBP18.31■□□□□ 0.52
DDX41-213ENST00000512027 VWA3AA6NCI4 1184 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 LRRIQ4A6NIV6 560 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 LAD1O00515 517 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 B4GALT5O43286 388 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 HOXA2O43364 376 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 ERLIN2O94905 339 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 EOMESO95936 686 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 GTF2F1P35269 517 aaKnown RBP eCLIP18.3■□□□□ 0.52
DDX41-213ENST00000512027 PRPHP41219 470 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 TFDP1Q14186 410 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 PDIA5Q14554 519 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 ZRSR1Q15695 479 aaKnown RBP18.3■□□□□ 0.52
DDX41-213ENST00000512027 AMHR2Q16671 573 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 KCNK18Q7Z418 384 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 ADGRD2Q7Z7M1 963 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 CDR2LQ86X02 465 aaPredicted RBP18.3■□□□□ 0.52
DDX41-213ENST00000512027 THNSL1Q8IYQ7 743 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 LRRC43Q8N309 656 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 TRAIPQ9BWF2 469 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 EIF2AQ9BY44 585 aaKnown RBP18.3■□□□□ 0.52
DDX41-213ENST00000512027 LMAN2LQ9H0V9 348 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 UBE2ZQ9H832 354 aaPredicted RBP18.3■□□□□ 0.52
DDX41-213ENST00000512027 INPP5FQ9Y2H2 1132 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 PCDHB2Q9Y5E7 798 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 PCDHB12Q9Y5F1 795 aa18.3■□□□□ 0.52
DDX41-213ENST00000512027 BDP1A6H8Y1 2624 aa18.29■□□□□ 0.52
DDX41-213ENST00000512027 K7ELQ4 463 aaPredicted RBP18.29■□□□□ 0.52
DDX41-213ENST00000512027 FGF18O76093 207 aa18.29■□□□□ 0.52
DDX41-213ENST00000512027 KRT79Q5XKE5 535 aa18.29■□□□□ 0.52
DDX41-213ENST00000512027 EP400NLQ6ZTU2 488 aa18.29■□□□□ 0.52
DDX41-213ENST00000512027 IFNLR1Q8IU57 520 aaPredicted RBP18.29■□□□□ 0.52
DDX41-213ENST00000512027 MCPH1Q8NEM0 835 aa18.29■□□□□ 0.52
DDX41-213ENST00000512027 NECAB3Q96P71 396 aaPredicted RBP18.29■□□□□ 0.52
DDX41-213ENST00000512027 PLIN2Q99541 437 aa18.29■□□□□ 0.52
DDX41-213ENST00000512027 RAB34Q9BZG1 259 aa18.29■□□□□ 0.52
DDX41-213ENST00000512027 COG5Q9UP83 839 aa18.29■□□□□ 0.52
DDX41-213ENST00000512027 LAG3P18627 525 aa18.28■□□□□ 0.52
DDX41-213ENST00000512027 CYP11B2P19099 503 aa18.28■□□□□ 0.52
DDX41-213ENST00000512027 MUTP22033 750 aa18.28■□□□□ 0.52
DDX41-213ENST00000512027 KCNA5P22460 613 aa18.28■□□□□ 0.52
DDX41-213ENST00000512027 RAB27AP51159 221 aa18.28■□□□□ 0.52
DDX41-213ENST00000512027 AFF1P51825 1210 aaKnown RBP18.28■□□□□ 0.52
DDX41-213ENST00000512027 HYAL1Q12794 435 aa18.28■□□□□ 0.52
DDX41-213ENST00000512027 NAALADL2Q58DX5 795 aa18.28■□□□□ 0.52
DDX41-213ENST00000512027 FAM173BQ6P4H8 233 aa18.28■□□□□ 0.52
DDX41-213ENST00000512027 KCNT2Q6UVM3 1135 aa18.28■□□□□ 0.52
DDX41-213ENST00000512027 AGMOQ6ZNB7 445 aa18.28■□□□□ 0.52
DDX41-213ENST00000512027 ADAMTS19Q8TE59 1207 aa18.28■□□□□ 0.52
DDX41-213ENST00000512027 IGFLR1Q9H665 355 aa18.28■□□□□ 0.52
DDX41-213ENST00000512027 AAASQ9NRG9 546 aa18.28■□□□□ 0.52
DDX41-213ENST00000512027 USP20Q9Y2K6 914 aa18.28■□□□□ 0.52
DDX41-213ENST00000512027 MYH15Q9Y2K3 1946 aa18.27■□□□□ 0.52
DDX41-213ENST00000512027 TTLL13PA6NNM8 815 aa18.27■□□□□ 0.52
DDX41-213ENST00000512027 NT5C1B-RDH14C9J2C7 533 aa18.27■□□□□ 0.52
DDX41-213ENST00000512027 H3BQ06 376 aaPredicted RBP18.27■□□□□ 0.52
DDX41-213ENST00000512027 LINC01565O15544 149 aa18.27■□□□□ 0.52
DDX41-213ENST00000512027 B4GALT3O60512 393 aa18.27■□□□□ 0.52
DDX41-213ENST00000512027 EDN1P05305 212 aa18.27■□□□□ 0.52
DDX41-213ENST00000512027 BMP1P13497 986 aa18.27■□□□□ 0.52
DDX41-213ENST00000512027 ARF4P18085 180 aaPredicted RBP18.27■□□□□ 0.52
DDX41-213ENST00000512027 SYT1P21579 422 aa18.27■□□□□ 0.52
DDX41-213ENST00000512027 GRIN1Q05586 938 aa18.27■□□□□ 0.52
DDX41-213ENST00000512027 POU5F1BQ06416 359 aa18.27■□□□□ 0.52
DDX41-213ENST00000512027 SMG8Q8ND04 991 aaKnown RBP18.27■□□□□ 0.52
DDX41-213ENST00000512027 ZNF558Q96NG5 402 aa18.27■□□□□ 0.52
DDX41-213ENST00000512027 PNMA5Q96PV4 448 aa18.27■□□□□ 0.52
DDX41-213ENST00000512027 KIFC3Q9BVG8 833 aa18.27■□□□□ 0.52
DDX41-213ENST00000512027 GBP3Q9H0R5 595 aa18.27■□□□□ 0.52
DDX41-213ENST00000512027 CLDND1Q9NY35 253 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms