RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 GPR25O00155 361 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 PPP6R2O75170 966 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 DDX58O95786 925 aaKnown RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 TOP3BO95985 862 aaKnown RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 SERPINB2P05120 415 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 HTR1AP08908 422 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 PCSK6P29122 969 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 OPRD1P41143 372 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 PRKCIP41743 596 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 MMP13P45452 471 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 ARCN1P48444 511 aaKnown RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 APOFQ13790 326 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 NFIL3Q16649 462 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 MYLK3Q32MK0 819 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 RGMBQ6NW40 437 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 CAVIN1Q6NZI2 390 aaKnown RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 CCDC91Q7Z6B0 441 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 NLRX1Q86UT6 975 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 FAM110BQ8TC76 370 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 FKBP10Q96AY3 582 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 DHX58Q96C10 678 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 RAB3IPQ96QF0 476 aaPredicted RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 SENP6Q9GZR1 1112 aaPredicted RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 ARHGEF3Q9NR81 526 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 SAMSN1Q9NSI8 373 aaKnown RBP1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 RNF186Q9NXI6 227 aa1.84□□□□□ -2.11
TRAPPC13-211ENST00000512009 NAV2Q8IVL1 2488 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 ADGRA3Q8IWK6 1321 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 APBB1O00213 710 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZNF862O60290 1169 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 EIF3JO75822 258 aaKnown RBP1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 KLHL18O94889 574 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 IL1BP01584 269 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 ATXN8OSP0DMR3 200 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 VCAM1P19320 739 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 PSMD8P48556 350 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 PTPN11Q06124 597 aaPredicted RBP1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 TRDNQ13061 729 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 PPIL2Q13356 520 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 TRIM29Q14134 588 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 SART3Q15020 963 aaKnown RBP1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 SAFBQ15424 915 aaKnown RBP eCLIP1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 CCDC181Q5TID7 509 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 C19orf48Q6RUI8 117 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 OGFOD1Q8N543 542 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 ENAHQ8N8S7 591 aaPredicted RBP1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 ENOX1Q8TC92 643 aaKnown RBP1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 TRPM4Q8TD43 1214 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 PARD3BQ8TEW8 1205 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 GTF3C2Q8WUA4 911 aaPredicted RBP1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 CLP1Q92989 425 aaKnown RBP1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 C11orf24Q96F05 449 aaPredicted RBP1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 ASIC4Q96FT7 647 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 PARD6BQ9BYG5 372 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 FZD1Q9UP38 647 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 FARP1Q9Y4F1 1045 aaPredicted RBP1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 PCDHA13Q9Y5I0 950 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 STARD9Q9P2P6 4700 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 ABCA4P78363 2273 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 NINQ8N4C6 2090 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 SMTNL1A8MU46 457 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 GRM8O00222 908 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 GFRA2O00451 464 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 ADAM10O14672 748 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 MEIS2O14770 477 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 EVI5O60447 810 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 TCF3P15923 654 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 DRD4P21917 467 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 MUTP22033 750 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 FUT4P22083 530 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 SP100P23497 879 aaPredicted RBP1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 GTF2H1P32780 548 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZNF76P36508 570 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 WDR4P57081 412 aaKnown RBP1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 TTLL12Q14166 644 aaPredicted RBP1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 ELF2Q15723 593 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 KIF4BQ2VIQ3 1234 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 ACCSLQ4AC99 568 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 GRAMD1CQ8IYS0 662 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 PDILTQ8N807 584 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 KDF1Q8NAX2 398 aaPredicted RBP1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 SH3RF3Q8TEJ3 882 aaPredicted RBP1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZKSCAN4Q969J2 545 aaPredicted RBP1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 SPATA32Q96LK8 384 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 PCMTD1Q96MG8 357 aaPredicted RBP1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 NUP58Q9BVL2 599 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 TRIM5Q9C035 493 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 KLC2Q9H0B6 622 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 DISC1Q9NRI5 854 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 FBLN5Q9UBX5 448 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 HAO1Q9UJM8 370 aa1.84□□□□□ -2.12
TRAPPC13-211ENST00000512009 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP1.83□□□□□ -2.12
TRAPPC13-211ENST00000512009 CETN3O15182 167 aa1.83□□□□□ -2.12
TRAPPC13-211ENST00000512009 STRNO43815 780 aa1.83□□□□□ -2.12
TRAPPC13-211ENST00000512009 GJB6O95452 261 aa1.83□□□□□ -2.12
TRAPPC13-211ENST00000512009 YEATS4O95619 227 aa1.83□□□□□ -2.12
TRAPPC13-211ENST00000512009 MBD3O95983 291 aa1.83□□□□□ -2.12
TRAPPC13-211ENST00000512009 PFKFB1P16118 471 aa1.83□□□□□ -2.12
TRAPPC13-211ENST00000512009 XBP1P17861 261 aa1.83□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZNF658BQ4V348 819 aaPredicted RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms