RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 RGL1Q9NZL6 768 aa6.53□□□□□ -1.36
RNF4-217ENST00000511892 LRFN2Q9ULH4 789 aa6.53□□□□□ -1.36
RNF4-217ENST00000511892 LIMCH1Q9UPQ0 1083 aa6.53□□□□□ -1.36
RNF4-217ENST00000511892 PCDHB7Q9Y5E2 793 aa6.53□□□□□ -1.36
RNF4-217ENST00000511892 DMDP11532 3685 aa6.53□□□□□ -1.36
RNF4-217ENST00000511892 MTCL1Q9Y4B5 1905 aaKnown RBP6.52□□□□□ -1.37
RNF4-217ENST00000511892 A0A087WZ62 844 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 TBKBP1A7MCY6 615 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 H3BQ06 376 aaPredicted RBP6.52□□□□□ -1.37
RNF4-217ENST00000511892 MAP3K7O43318 606 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 SLITRK3O94933 977 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 KCNA5P22460 613 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 IRS1P35568 1242 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 LTBRP36941 435 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 GUCY1B3Q02153 619 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 HYAL1Q12794 435 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 CTTNQ14247 550 aaKnown RBP6.52□□□□□ -1.37
RNF4-217ENST00000511892 NBR1Q14596 966 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 CTC1Q2NKJ3 1217 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 NAALADL2Q58DX5 795 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 CLLU1OSQ5K130 101 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 NCAPH2Q6IBW4 605 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 ZNF598Q86UK7 904 aaKnown RBP6.52□□□□□ -1.37
RNF4-217ENST00000511892 PACS2Q86VP3 889 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 ECHDC2Q86YB7 292 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 RHPN2Q8IUC4 686 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 CCDC83Q8IWF9 413 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 C4orf19Q8IY42 314 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 SLFN12Q8IYM2 578 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 NLRP7Q8WX94 980 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 DYDC2Q96IM9 177 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 CASD1Q96PB1 797 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 MTMR9Q96QG7 549 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 NAP1L4Q99733 375 aaKnown RBP6.52□□□□□ -1.37
RNF4-217ENST00000511892 HSD17B14Q9BPX1 270 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 FDXACB1Q9BRP7 624 aaPredicted RBP6.52□□□□□ -1.37
RNF4-217ENST00000511892 LXNQ9BS40 222 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 LMAN2LQ9H0V9 348 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 TMEM60Q9H2L4 133 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 DHX33Q9H6R0 707 aaKnown RBP6.52□□□□□ -1.37
RNF4-217ENST00000511892 CWH43Q9H720 699 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 ELAC1Q9H777 363 aaKnown RBP6.52□□□□□ -1.37
RNF4-217ENST00000511892 ATP6V0A4Q9HBG4 840 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 IFT122Q9HBG6 1241 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 CD320Q9NPF0 282 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 CYP26B1Q9NR63 512 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 TYW1Q9NV66 732 aaKnown RBP6.52□□□□□ -1.37
RNF4-217ENST00000511892 TMEM161AQ9NX61 479 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 CHMP5Q9NZZ3 219 aa6.52□□□□□ -1.37
RNF4-217ENST00000511892 SUCLA2Q9P2R7 463 aaPredicted RBP6.52□□□□□ -1.37
RNF4-217ENST00000511892 A0A087WWV3 80 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 A0A0U1RQF3 1178 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 GRXCR2A6NFK2 248 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 K7ELQ4 463 aaPredicted RBP6.51□□□□□ -1.37
RNF4-217ENST00000511892 LINC01565O15544 149 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 MARCH6O60337 910 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 CSPG5O95196 566 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 BAG4O95429 457 aaKnown RBP6.51□□□□□ -1.37
RNF4-217ENST00000511892 ZSCAN20P17040 1043 aaPredicted RBP6.51□□□□□ -1.37
RNF4-217ENST00000511892 ATF7P17544 494 aaPredicted RBP6.51□□□□□ -1.37
RNF4-217ENST00000511892 YWHABP31946 246 aaKnown RBP6.51□□□□□ -1.37
RNF4-217ENST00000511892 DNM2P50570 870 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 CDC42EP1Q00587 391 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 CYP4A11Q02928 519 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 DLX2Q07687 328 aaPredicted RBP6.51□□□□□ -1.37
RNF4-217ENST00000511892 CALCRLQ16602 461 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 ADGRD2Q7Z7M1 963 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 ZNF410Q86VK4 478 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 TPH2Q8IWU9 490 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 COLGALT1Q8NBJ5 622 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 POF1BQ8WVV4 589 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 PRPF31Q8WWY3 499 aaKnown RBP6.51□□□□□ -1.37
RNF4-217ENST00000511892 TMEM143Q96AN5 459 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 PABPC5Q96DU9 382 aaKnown RBP6.51□□□□□ -1.37
RNF4-217ENST00000511892 CEP170P1Q96L14 293 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 EIF2AK1Q9BQI3 630 aaKnown RBP6.51□□□□□ -1.37
RNF4-217ENST00000511892 LLPHQ9BRT6 129 aaKnown RBP6.51□□□□□ -1.37
RNF4-217ENST00000511892 GCOM2Q9BZD3 368 aaPredicted RBP6.51□□□□□ -1.37
RNF4-217ENST00000511892 TTC12Q9H892 705 aaPredicted RBP6.51□□□□□ -1.37
RNF4-217ENST00000511892 MINDY3Q9H8M7 445 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 BRMS1Q9HCU9 246 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 CLDND1Q9NY35 253 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 PCDHA12Q9UN75 941 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 PCDHGC5Q9Y5F6 944 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 PLXNA3P51805 1871 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 C2orf16Q68DN1 1984 aa6.51□□□□□ -1.37
RNF4-217ENST00000511892 MEIS3P2A8K0S8 358 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 LCE2BO14633 110 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 FSCN2O14926 492 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 NCK2O43639 380 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 NEMFO60524 1076 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 DKC1O60832 514 aaKnown RBP eCLIP6.5□□□□□ -1.37
RNF4-217ENST00000511892 RNF40O75150 1001 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 TBX10O75333 385 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 FGF18O76093 207 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 LYPLA2O95372 231 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 EOMESO95936 686 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 SRGAP2CP0DJJ0 459 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 SPATA31C1P0DKV0 1188 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 IL9P15248 144 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms