RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 CUL4AQ13619 759 aa14.77□□□□□ -0.05
RNF4-215ENST00000511843 FAM43BQ6ZT52 329 aaPredicted RBP14.77□□□□□ -0.05
RNF4-215ENST00000511843 IL27Q8NEV9 243 aa14.77□□□□□ -0.05
RNF4-215ENST00000511843 SNX29Q8TEQ0 813 aa14.77□□□□□ -0.05
RNF4-215ENST00000511843 POF1BQ8WVV4 589 aa14.77□□□□□ -0.05
RNF4-215ENST00000511843 P2RX5Q93086 422 aa14.77□□□□□ -0.05
RNF4-215ENST00000511843 CPB2Q96IY4 423 aa14.77□□□□□ -0.05
RNF4-215ENST00000511843 NACC1Q96RE7 527 aa14.77□□□□□ -0.05
RNF4-215ENST00000511843 NSUN3Q9H649 340 aaKnown RBP14.77□□□□□ -0.05
RNF4-215ENST00000511843 UBE2ZQ9H832 354 aaPredicted RBP14.77□□□□□ -0.05
RNF4-215ENST00000511843 CHST12Q9NRB3 414 aa14.77□□□□□ -0.05
RNF4-215ENST00000511843 FAM105AQ9NUU6 356 aa14.77□□□□□ -0.05
RNF4-215ENST00000511843 RNF216Q9NWF9 866 aaPredicted RBP14.77□□□□□ -0.05
RNF4-215ENST00000511843 DBR1Q9UK59 544 aaKnown RBP14.77□□□□□ -0.05
RNF4-215ENST00000511843 ARHGEF35A5YM69 484 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 ASAP2O43150 1006 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 HOXA2O43364 376 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 TSPAN1O60635 241 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 XRCC6P12956 609 aaKnown RBP eCLIP14.76□□□□□ -0.05
RNF4-215ENST00000511843 BMP1P13497 986 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 KCNA5P22460 613 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 PTENP60484 403 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 MXD4Q14582 209 aaPredicted RBP14.76□□□□□ -0.05
RNF4-215ENST00000511843 RILPL1Q5EBL4 403 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 UBXN11Q5T124 520 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 HAUS3Q68CZ6 603 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 PADI6Q6TGC4 694 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 ADGRD2Q7Z7M1 963 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 THNSL1Q8IYQ7 743 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 IGSF22Q8N9C0 903 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 ADAMTS19Q8TE59 1207 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 BSNDQ8WZ55 320 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 DDX19AQ9NUU7 478 aaKnown RBP14.76□□□□□ -0.05
RNF4-215ENST00000511843 COG5Q9UP83 839 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 KIAA1024Q9UPX6 916 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 INPP5FQ9Y2H2 1132 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 PCDHB12Q9Y5F1 795 aa14.76□□□□□ -0.05
RNF4-215ENST00000511843 TRIP11Q15643 1979 aa14.75□□□□□ -0.05
RNF4-215ENST00000511843 VPS37CA5D8V6 355 aaPredicted RBP14.75□□□□□ -0.05
RNF4-215ENST00000511843 LRRIQ4A6NIV6 560 aa14.75□□□□□ -0.05
RNF4-215ENST00000511843 H3BQ06 376 aaPredicted RBP14.75□□□□□ -0.05
RNF4-215ENST00000511843 B4GALT5O43286 388 aa14.75□□□□□ -0.05
RNF4-215ENST00000511843 FGF18O76093 207 aa14.75□□□□□ -0.05
RNF4-215ENST00000511843 ERLIN2O94905 339 aa14.75□□□□□ -0.05
RNF4-215ENST00000511843 EOMESO95936 686 aa14.75□□□□□ -0.05
RNF4-215ENST00000511843 LAG3P18627 525 aa14.75□□□□□ -0.05
RNF4-215ENST00000511843 AFF1P51825 1210 aaKnown RBP14.75□□□□□ -0.05
RNF4-215ENST00000511843 ATP2C1P98194 919 aaPredicted RBP14.75□□□□□ -0.05
RNF4-215ENST00000511843 MBTD1Q05BQ5 628 aa14.75□□□□□ -0.05
RNF4-215ENST00000511843 HYAL1Q12794 435 aa14.75□□□□□ -0.05
RNF4-215ENST00000511843 TFDP1Q14186 410 aa14.75□□□□□ -0.05
RNF4-215ENST00000511843 CDR2LQ86X02 465 aaPredicted RBP14.75□□□□□ -0.05
RNF4-215ENST00000511843 LRRC43Q8N309 656 aa14.75□□□□□ -0.05
RNF4-215ENST00000511843 MMTAG2Q9BU76 263 aaKnown RBP14.75□□□□□ -0.05
RNF4-215ENST00000511843 EIF2AQ9BY44 585 aaKnown RBP14.75□□□□□ -0.05
RNF4-215ENST00000511843 LMAN2LQ9H0V9 348 aa14.75□□□□□ -0.05
RNF4-215ENST00000511843 BHMT2Q9H2M3 363 aa14.75□□□□□ -0.05
RNF4-215ENST00000511843 IGFLR1Q9H665 355 aa14.75□□□□□ -0.05
RNF4-215ENST00000511843 PCDHB2Q9Y5E7 798 aa14.75□□□□□ -0.05
RNF4-215ENST00000511843 C5orf42Q9H799 3197 aa14.75□□□□□ -0.05
RNF4-215ENST00000511843 SPTBN5Q9NRC6 3674 aaKnown RBP14.74□□□□□ -0.05
RNF4-215ENST00000511843 CUL9Q8IWT3 2517 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.74□□□□□ -0.05
RNF4-215ENST00000511843 VWA3AA6NCI4 1184 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 NT5C1B-RDH14C9J2C7 533 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 E9PMD0 336 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 LINC01565O15544 149 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 PRPHP41219 470 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 PDIA5Q14554 519 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 ZRSR1Q15695 479 aaKnown RBP14.74□□□□□ -0.05
RNF4-215ENST00000511843 AMHR2Q16671 573 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 AAK1Q2M2I8 961 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 NAALADL2Q58DX5 795 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 KCNT2Q6UVM3 1135 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 DTHD1Q6ZMT9 781 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 KCNK18Q7Z418 384 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 RBM23Q86U06 439 aaKnown RBP14.74□□□□□ -0.05
RNF4-215ENST00000511843 MCPH1Q8NEM0 835 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 SYMPKQ92797 1274 aaKnown RBP14.74□□□□□ -0.05
RNF4-215ENST00000511843 PLIN2Q99541 437 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 TRAIPQ9BWF2 469 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 AAASQ9NRG9 546 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 CLDND1Q9NY35 253 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 USP20Q9Y2K6 914 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 HES2Q9Y543 173 aa14.74□□□□□ -0.05
RNF4-215ENST00000511843 TTLL13PA6NNM8 815 aa14.73□□□□□ -0.05
RNF4-215ENST00000511843 LAD1O00515 517 aa14.73□□□□□ -0.05
RNF4-215ENST00000511843 B4GALT3O60512 393 aa14.73□□□□□ -0.05
RNF4-215ENST00000511843 OFD1O75665 1012 aa14.73□□□□□ -0.05
RNF4-215ENST00000511843 ARF4P18085 180 aaPredicted RBP14.73□□□□□ -0.05
RNF4-215ENST00000511843 LIG1P18858 919 aa14.73□□□□□ -0.05
RNF4-215ENST00000511843 CYP11B2P19099 503 aa14.73□□□□□ -0.05
RNF4-215ENST00000511843 RAB27AP51159 221 aa14.73□□□□□ -0.05
RNF4-215ENST00000511843 ERVFC1P60507 584 aa14.73□□□□□ -0.05
RNF4-215ENST00000511843 CLUL1Q15846 466 aa14.73□□□□□ -0.05
RNF4-215ENST00000511843 AGMOQ6ZNB7 445 aa14.73□□□□□ -0.05
RNF4-215ENST00000511843 IFNLR1Q8IU57 520 aaPredicted RBP14.73□□□□□ -0.05
RNF4-215ENST00000511843 SMG8Q8ND04 991 aaKnown RBP14.73□□□□□ -0.05
RNF4-215ENST00000511843 ZNF558Q96NG5 402 aa14.73□□□□□ -0.05
RNF4-215ENST00000511843 KIFC3Q9BVG8 833 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms