RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 LCA5Q86VQ0 697 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 SLC20A1Q8WUM9 679 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 SOCS4Q8WXH5 440 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 P2RX5Q93086 422 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 OSBP2Q969R2 916 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 MCUR1Q96AQ8 359 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 ARL8AQ96BM9 186 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 VAT1LQ9HCJ6 419 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 HGSO14964 777 aaPredicted RBP5.28□□□□□ -1.56
PTPN13-209ENST00000511467 LSM8O95777 96 aaKnown RBP5.28□□□□□ -1.56
PTPN13-209ENST00000511467 GSTA2P09210 222 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 UBXN2AP68543 259 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 PTGDRQ13258 359 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 TMEM35BQ8NCS4 154 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 PSPC1Q8WXF1 523 aaKnown RBP5.28□□□□□ -1.56
PTPN13-209ENST00000511467 CEP44Q9C0F1 390 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 ACAD9Q9H845 621 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 CTTNBP2NLQ9P2B4 639 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 TUBGCP4Q9UGJ1 667 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 EPN1Q9Y6I3 576 aaPredicted RBP5.28□□□□□ -1.56
PTPN13-209ENST00000511467 CABIN1Q9Y6J0 2220 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 BCL9LQ86UU0 1499 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 KANSL1LA0AUZ9 987 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 KPNA7A9QM74 516 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 TADA3O75528 432 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 HCLS1P14317 486 aaPredicted RBP5.28□□□□□ -1.56
PTPN13-209ENST00000511467 CES1P23141 567 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 LTKP29376 864 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 ATICP31939 592 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 SLC4A3P48751 1232 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 ESRRGP62508 458 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 KRR1Q13601 381 aaKnown RBP5.28□□□□□ -1.56
PTPN13-209ENST00000511467 LRRC8EQ6NSJ5 796 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 PTF1AQ7RTS3 328 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 GIPC2Q8TF65 315 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 UPF3AQ9H1J1 476 aaKnown RBP5.28□□□□□ -1.56
PTPN13-209ENST00000511467 ZCCHC17Q9NP64 241 aaKnown RBP5.28□□□□□ -1.56
PTPN13-209ENST00000511467 PRMT7Q9NVM4 692 aaPredicted RBP5.28□□□□□ -1.56
PTPN13-209ENST00000511467 ZNRF3Q9ULT6 936 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 H7C4K7 107 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 CTNND1O60716 968 aaKnown RBP5.28□□□□□ -1.56
PTPN13-209ENST00000511467 CYP2C18P33260 490 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 FXR1P51114 621 aaKnown RBP eCLIP5.28□□□□□ -1.56
PTPN13-209ENST00000511467 RASGRF1Q13972 1273 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 USP38Q8NB14 1042 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 VTI1BQ9UEU0 232 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 RAD54BQ9Y620 910 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 CFAP73A6NFT4 308 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 HNRNPDLO14979 420 aaKnown RBP5.28□□□□□ -1.56
PTPN13-209ENST00000511467 TAF5LO75529 589 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 CHRNA3P32297 505 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 NAB1Q13506 487 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 IQCB1Q15051 598 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 TAF1BQ53T94 588 aaPredicted RBP5.28□□□□□ -1.56
PTPN13-209ENST00000511467 C4orf50Q6ZRC1 276 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 CMTM5Q96DZ9 223 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 FRMPD4Q14CM0 1322 aa5.28□□□□□ -1.56
PTPN13-209ENST00000511467 STAG3L1P0CL83 205 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 CETPP11597 493 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 ERCC3P19447 782 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 GRIN1Q05586 938 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 HHATQ5VTY9 493 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 LRRC49Q8IUZ0 686 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 CCDC105Q8IYK2 499 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 XXYLT1Q8NBI6 393 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 PCSK9Q8NBP7 692 aaKnown RBP5.27□□□□□ -1.57
PTPN13-209ENST00000511467 SNX19Q92543 992 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 NCLNQ969V3 563 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 TMX1Q9H3N1 280 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 SPATS2LQ9NUQ6 558 aaKnown RBP5.27□□□□□ -1.57
PTPN13-209ENST00000511467 IFNKQ9P0W0 207 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 IP6K2Q9UHH9 426 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 ARHGAP26Q9UNA1 814 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 SMG5Q9UPR3 1016 aaKnown RBP5.27□□□□□ -1.57
PTPN13-209ENST00000511467 COL3A1P02461 1466 aaPredicted RBP5.27□□□□□ -1.57
PTPN13-209ENST00000511467 GAKO14976 1311 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 ATF2P15336 505 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 CDH2P19022 906 aaPredicted RBP5.27□□□□□ -1.57
PTPN13-209ENST00000511467 PSMC5P62195 406 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 ARRDC4Q8NCT1 418 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 NEDD1Q8NHV4 660 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 GMCL1Q96IK5 515 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 PHACTR3Q96KR7 559 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 C1QTNF7Q9BXJ2 289 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 ASIC3Q9UHC3 531 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 SPTBP11277 2137 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 SYNDIG1LA6NDD5 238 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 F9P00740 461 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 INHBAP08476 426 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 CDC27P30260 824 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 NR2C2P49116 596 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 SERPINB9P50453 376 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 MXRA7P84157 204 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 ELF2Q15723 593 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 FIGNQ5HY92 759 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 AARS2Q5JTZ9 985 aaKnown RBP5.27□□□□□ -1.57
PTPN13-209ENST00000511467 APPL2Q8NEU8 664 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 ASAP3Q8TDY4 903 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 LRRC4Q9HBW1 653 aa5.27□□□□□ -1.57
PTPN13-209ENST00000511467 OLA1Q9NTK5 396 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms