RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 MAGEL2Q9UJ55 1249 aa9.71□□□□□ -0.86
USP53-206ENST00000510737 RGS12O14924 1447 aa9.71□□□□□ -0.86
USP53-206ENST00000510737 PHLPP1O60346 1717 aa9.7□□□□□ -0.86
USP53-206ENST00000510737 KCNQ2O43526 872 aa9.7□□□□□ -0.86
USP53-206ENST00000510737 RIN1Q13671 783 aa9.7□□□□□ -0.86
USP53-206ENST00000510737 LRP10Q7Z4F1 713 aa9.7□□□□□ -0.86
USP53-206ENST00000510737 TRIM8Q9BZR9 551 aa9.7□□□□□ -0.86
USP53-206ENST00000510737 SPATA31A6Q5VVP1 1343 aa9.7□□□□□ -0.86
USP53-206ENST00000510737 DHX29Q7Z478 1369 aaKnown RBP9.7□□□□□ -0.86
USP53-206ENST00000510737 FMN1Q68DA7 1419 aa9.7□□□□□ -0.86
USP53-206ENST00000510737 SYCP2Q9BX26 1530 aa9.7□□□□□ -0.86
USP53-206ENST00000510737 KDM5DQ9BY66 1539 aa9.7□□□□□ -0.86
USP53-206ENST00000510737 PMS2P1A4D2B8 440 aa9.69□□□□□ -0.86
USP53-206ENST00000510737 E9PSI1 815 aa9.69□□□□□ -0.86
USP53-206ENST00000510737 MAFO75444 373 aaPredicted RBP9.69□□□□□ -0.86
USP53-206ENST00000510737 APEX1P27695 318 aaKnown RBP9.69□□□□□ -0.86
USP53-206ENST00000510737 ALDH6A1Q02252 535 aaKnown RBP9.69□□□□□ -0.86
USP53-206ENST00000510737 LRRC9Q6ZRR7 1453 aa9.69□□□□□ -0.86
USP53-206ENST00000510737 SGMS1Q86VZ5 419 aa9.69□□□□□ -0.86
USP53-206ENST00000510737 D2HGDHQ8N465 521 aa9.69□□□□□ -0.86
USP53-206ENST00000510737 AMER2Q8N7J2 671 aa9.69□□□□□ -0.86
USP53-206ENST00000510737 ZNF703Q9H7S9 590 aaPredicted RBP9.69□□□□□ -0.86
USP53-206ENST00000510737 KIAA1107Q9UPP5 1409 aa9.68□□□□□ -0.86
USP53-206ENST00000510737 MCM7P33993 719 aa9.68□□□□□ -0.86
USP53-206ENST00000510737 ANTXR2P58335 489 aa9.68□□□□□ -0.86
USP53-206ENST00000510737 ATP2C1P98194 919 aaPredicted RBP9.68□□□□□ -0.86
USP53-206ENST00000510737 IRF9Q00978 393 aa9.68□□□□□ -0.86
USP53-206ENST00000510737 OTOP1Q7RTM1 612 aa9.68□□□□□ -0.86
USP53-206ENST00000510737 HIRIP3Q9BW71 556 aaPredicted RBP9.68□□□□□ -0.86
USP53-206ENST00000510737 SH3BP1Q9Y3L3 701 aa9.68□□□□□ -0.86
USP53-206ENST00000510737 LRP5O75197 1615 aa9.67□□□□□ -0.86
USP53-206ENST00000510737 GPATCH8Q9UKJ3 1502 aaKnown RBP9.67□□□□□ -0.86
USP53-206ENST00000510737 DVL2O14641 736 aa9.67□□□□□ -0.86
USP53-206ENST00000510737 MECP2P51608 486 aaKnown RBP9.67□□□□□ -0.86
USP53-206ENST00000510737 ADAM8P78325 824 aa9.67□□□□□ -0.86
USP53-206ENST00000510737 TUBA3CQ13748 450 aa9.67□□□□□ -0.86
USP53-206ENST00000510737 TUBA3EQ6PEY2 450 aa9.67□□□□□ -0.86
USP53-206ENST00000510737 ADGRE4PQ86SQ3 457 aa9.67□□□□□ -0.86
USP53-206ENST00000510737 C2orf69Q8N8R5 385 aa9.67□□□□□ -0.86
USP53-206ENST00000510737 MMRN2Q9H8L6 949 aa9.67□□□□□ -0.86
USP53-206ENST00000510737 ZNF644Q9H582 1327 aaPredicted RBP9.66□□□□□ -0.86
USP53-206ENST00000510737 CDC42BPAQ5VT25 1732 aa9.66□□□□□ -0.86
USP53-206ENST00000510737 LRRIQ1Q96JM4 1722 aa9.66□□□□□ -0.86
USP53-206ENST00000510737 CAPN14A8MX76 684 aa9.66□□□□□ -0.86
USP53-206ENST00000510737 ADCY7P51828 1080 aa9.66□□□□□ -0.86
USP53-206ENST00000510737 DPTQ07507 201 aa9.66□□□□□ -0.86
USP53-206ENST00000510737 CALML6Q8TD86 181 aa9.66□□□□□ -0.86
USP53-206ENST00000510737 NEU4Q8WWR8 484 aaPredicted RBP9.66□□□□□ -0.86
USP53-206ENST00000510737 LARP4BQ92615 738 aaKnown RBP9.66□□□□□ -0.86
USP53-206ENST00000510737 FOXB1Q99853 325 aa9.66□□□□□ -0.86
USP53-206ENST00000510737 MRPL4Q9BYD3 311 aaKnown RBP9.66□□□□□ -0.86
USP53-206ENST00000510737 CFDP1Q9UEE9 299 aaPredicted RBP9.66□□□□□ -0.86
USP53-206ENST00000510737 SHPRHQ149N8 1683 aa9.65□□□□□ -0.86
USP53-206ENST00000510737 ADGBQ8N7X0 1667 aa9.65□□□□□ -0.86
USP53-206ENST00000510737 AFF2P51816 1311 aa9.65□□□□□ -0.86
USP53-206ENST00000510737 KRTAP23-1A1A580 65 aa9.65□□□□□ -0.86
USP53-206ENST00000510737 C2orf78A6NCI8 922 aa9.65□□□□□ -0.86
USP53-206ENST00000510737 RGS3P49796 1198 aa9.65□□□□□ -0.86
USP53-206ENST00000510737 RABGGTAQ92696 567 aa9.65□□□□□ -0.86
USP53-206ENST00000510737 GIT1Q9Y2X7 761 aa9.65□□□□□ -0.86
USP53-206ENST00000510737 PTCH2Q9Y6C5 1203 aa9.65□□□□□ -0.86
USP53-206ENST00000510737 SCAF11Q99590 1463 aaKnown RBP9.65□□□□□ -0.87
USP53-206ENST00000510737 FGD6Q6ZV73 1430 aa9.65□□□□□ -0.87
USP53-206ENST00000510737 TIAM1Q13009 1591 aa9.64□□□□□ -0.87
USP53-206ENST00000510737 RBM6P78332 1123 aaKnown RBP9.64□□□□□ -0.87
USP53-206ENST00000510737 RRP1BQ14684 758 aaKnown RBP9.64□□□□□ -0.87
USP53-206ENST00000510737 CC2D1AQ6P1N0 951 aaPredicted RBP9.64□□□□□ -0.87
USP53-206ENST00000510737 LDLRAD3Q86YD5 345 aa9.64□□□□□ -0.87
USP53-206ENST00000510737 TMPRSS6Q8IU80 811 aa9.64□□□□□ -0.87
USP53-206ENST00000510737 SRPK1Q96SB4 655 aaKnown RBP9.64□□□□□ -0.87
USP53-206ENST00000510737 GPHA2Q96T91 129 aa9.64□□□□□ -0.87
USP53-206ENST00000510737 VWA7Q9Y334 891 aa9.64□□□□□ -0.87
USP53-206ENST00000510737 ARHGAP35Q9NRY4 1499 aa9.64□□□□□ -0.87
USP53-206ENST00000510737 HIP1RO75146 1068 aa9.63□□□□□ -0.87
USP53-206ENST00000510737 PRLP01236 227 aa9.63□□□□□ -0.87
USP53-206ENST00000510737 HHEXQ03014 270 aa9.63□□□□□ -0.87
USP53-206ENST00000510737 ZNF627Q7L945 461 aa9.63□□□□□ -0.87
USP53-206ENST00000510737 LILRB2Q8N423 598 aa9.63□□□□□ -0.87
USP53-206ENST00000510737 ZSWIM2Q8NEG5 633 aa9.63□□□□□ -0.87
USP53-206ENST00000510737 ARMC5Q96C12 935 aa9.63□□□□□ -0.87
USP53-206ENST00000510737 C8orf37Q96NL8 207 aa9.63□□□□□ -0.87
USP53-206ENST00000510737 CLUHP3Q96NS8 147 aa9.63□□□□□ -0.87
USP53-206ENST00000510737 CEP89Q96ST8 783 aa9.63□□□□□ -0.87
USP53-206ENST00000510737 BOCQ9BWV1 1114 aa9.63□□□□□ -0.87
USP53-206ENST00000510737 NCOA5Q9HCD5 579 aaKnown RBP9.63□□□□□ -0.87
USP53-206ENST00000510737 C11orf21Q9P2W6 132 aa9.63□□□□□ -0.87
USP53-206ENST00000510737 NCOA2Q15596 1464 aa9.63□□□□□ -0.87
USP53-206ENST00000510737 WDR33Q9C0J8 1336 aaKnown RBP9.62□□□□□ -0.87
USP53-206ENST00000510737 ARHGAP23Q9P227 1491 aa9.62□□□□□ -0.87
USP53-206ENST00000510737 KRT37O76014 449 aa9.62□□□□□ -0.87
USP53-206ENST00000510737 NPTXRO95502 500 aa9.62□□□□□ -0.87
USP53-206ENST00000510737 SLC25A3Q00325 362 aa9.62□□□□□ -0.87
USP53-206ENST00000510737 KLHDC10Q6PID8 442 aa9.62□□□□□ -0.87
USP53-206ENST00000510737 Q6ZRM9 215 aa9.62□□□□□ -0.87
USP53-206ENST00000510737 THAP3Q8WTV1 239 aaPredicted RBP9.62□□□□□ -0.87
USP53-206ENST00000510737 NKD2Q969F2 451 aaPredicted RBP9.62□□□□□ -0.87
USP53-206ENST00000510737 SLC2A4RGQ9NR83 387 aa9.62□□□□□ -0.87
USP53-206ENST00000510737 EID1Q9Y6B2 187 aa9.62□□□□□ -0.87
USP53-206ENST00000510737 UBR1Q8IWV7 1749 aa9.62□□□□□ -0.87
USP53-206ENST00000510737 A0A1W2PRX2 142 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms