RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 COL4A3BPQ9Y5P4 624 aa11.34□□□□□ -0.59
SCARB2-204ENST00000509994 TRIOO75962 3097 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 FAM205CA6NFA0 338 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 EIF5BO60841 1220 aaKnown RBP11.33□□□□□ -0.6
SCARB2-204ENST00000509994 ERLIN2O94905 339 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 ATP2B1P20020 1258 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 YWHABP31946 246 aaKnown RBP11.33□□□□□ -0.6
SCARB2-204ENST00000509994 RFC5P40937 340 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 RAB27AP51159 221 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 NEK4P51957 841 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 BCAR1P56945 870 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 PLCB3Q01970 1234 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 COASYQ13057 564 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 NR5A1Q13285 461 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 EMC2Q15006 297 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 CALCRLQ16602 461 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 RNF135Q8IUD6 432 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 TCP11Q8WWU5 503 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 PGBD4Q96DM1 585 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 DYDC2Q96IM9 177 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 MSLNLQ96KJ4 702 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 FAM193BQ96PV7 902 aaPredicted RBP11.33□□□□□ -0.6
SCARB2-204ENST00000509994 NGRNQ9NPE2 291 aaKnown RBP11.33□□□□□ -0.6
SCARB2-204ENST00000509994 CHST12Q9NRB3 414 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 FAM105AQ9NUU6 356 aa11.33□□□□□ -0.6
SCARB2-204ENST00000509994 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.32□□□□□ -0.6
SCARB2-204ENST00000509994 C19orf67A6NJJ6 358 aa11.32□□□□□ -0.6
SCARB2-204ENST00000509994 HIDE1A8MVS5 230 aa11.32□□□□□ -0.6
SCARB2-204ENST00000509994 FSCN2O14926 492 aa11.32□□□□□ -0.6
SCARB2-204ENST00000509994 TBX3O15119 743 aa11.32□□□□□ -0.6
SCARB2-204ENST00000509994 EYA4O95677 639 aa11.32□□□□□ -0.6
SCARB2-204ENST00000509994 NCBP1Q09161 790 aaKnown RBP11.32□□□□□ -0.6
SCARB2-204ENST00000509994 EPHA7Q15375 998 aa11.32□□□□□ -0.6
SCARB2-204ENST00000509994 NOMO2Q5JPE7 1267 aa11.32□□□□□ -0.6
SCARB2-204ENST00000509994 B3GNT9Q6UX72 402 aa11.32□□□□□ -0.6
SCARB2-204ENST00000509994 RNF149Q8NC42 400 aa11.32□□□□□ -0.6
SCARB2-204ENST00000509994 PRPF31Q8WWY3 499 aaKnown RBP11.32□□□□□ -0.6
SCARB2-204ENST00000509994 GTF3C6Q969F1 213 aa11.32□□□□□ -0.6
SCARB2-204ENST00000509994 MTRQ99707 1265 aa11.32□□□□□ -0.6
SCARB2-204ENST00000509994 ZSWIM4Q9H7M6 989 aa11.32□□□□□ -0.6
SCARB2-204ENST00000509994 KCNMB3Q9NPA1 279 aa11.32□□□□□ -0.6
SCARB2-204ENST00000509994 RGL1Q9NZL6 768 aa11.32□□□□□ -0.6
SCARB2-204ENST00000509994 TDRD15B5MCY1 1934 aaKnown RBP11.32□□□□□ -0.6
SCARB2-204ENST00000509994 IGKV6-21A0A0C4DH24 114 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 GAS2O43903 313 aaKnown RBP11.31□□□□□ -0.6
SCARB2-204ENST00000509994 NEMFO60524 1076 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 STBD1O95210 358 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 LARGE1O95461 756 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 CTDNEP1O95476 244 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 CXCL14O95715 111 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 SSBP05455 408 aaKnown RBP eCLIP11.31□□□□□ -0.6
SCARB2-204ENST00000509994 ATF7P17544 494 aaPredicted RBP11.31□□□□□ -0.6
SCARB2-204ENST00000509994 TXKP42681 527 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 LAMTOR4Q0VGL1 99 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 GNL2Q13823 731 aaKnown RBP11.31□□□□□ -0.6
SCARB2-204ENST00000509994 TFDP1Q14186 410 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 SAFBQ15424 915 aaKnown RBP eCLIP11.31□□□□□ -0.6
SCARB2-204ENST00000509994 ME3Q16798 604 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 TMEM132AQ24JP5 1023 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 TPRNQ4KMQ1 711 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 EARS2Q5JPH6 523 aaKnown RBP11.31□□□□□ -0.6
SCARB2-204ENST00000509994 CES5AQ6NT32 575 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 ANKRD54Q6NXT1 300 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 SRGAP1Q7Z6B7 1085 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 ZNF598Q86UK7 904 aaKnown RBP11.31□□□□□ -0.6
SCARB2-204ENST00000509994 DIS3L2Q8IYB7 885 aaKnown RBP11.31□□□□□ -0.6
SCARB2-204ENST00000509994 VPS52Q8N1B4 723 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 SLC39A11Q8N1S5 342 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 ZNF579Q8NAF0 562 aaKnown RBP11.31□□□□□ -0.6
SCARB2-204ENST00000509994 VN1R2Q8NFZ6 395 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 HAS1Q92839 578 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 CASP10Q92851 521 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 APOL6Q9BWW8 343 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 PHF7Q9BWX1 381 aaPredicted RBP11.31□□□□□ -0.6
SCARB2-204ENST00000509994 AGPAT5Q9NUQ2 364 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 WRAP73Q9P2S5 460 aaPredicted RBP11.31□□□□□ -0.6
SCARB2-204ENST00000509994 PCDHA12Q9UN75 941 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 PPME1Q9Y570 386 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 PCDHB2Q9Y5E7 798 aa11.31□□□□□ -0.6
SCARB2-204ENST00000509994 CARNS1A5YM72 827 aa11.3□□□□□ -0.6
SCARB2-204ENST00000509994 INO80B-WBP1J3KQ70 363 aa11.3□□□□□ -0.6
SCARB2-204ENST00000509994 JAK2O60674 1132 aa11.3□□□□□ -0.6
SCARB2-204ENST00000509994 GUCY1B3Q02153 619 aa11.3□□□□□ -0.6
SCARB2-204ENST00000509994 CBX2Q14781 532 aaPredicted RBP11.3□□□□□ -0.6
SCARB2-204ENST00000509994 C4orf19Q8IY42 314 aa11.3□□□□□ -0.6
SCARB2-204ENST00000509994 AUTS2Q8WXX7 1259 aa11.3□□□□□ -0.6
SCARB2-204ENST00000509994 RSPH1Q8WYR4 309 aa11.3□□□□□ -0.6
SCARB2-204ENST00000509994 CEP89Q96ST8 783 aa11.3□□□□□ -0.6
SCARB2-204ENST00000509994 EIF2AK1Q9BQI3 630 aaKnown RBP11.3□□□□□ -0.6
SCARB2-204ENST00000509994 TRIM6Q9C030 488 aaPredicted RBP11.3□□□□□ -0.6
SCARB2-204ENST00000509994 TTC12Q9H892 705 aaPredicted RBP11.3□□□□□ -0.6
SCARB2-204ENST00000509994 TBC1D13Q9NVG8 400 aa11.3□□□□□ -0.6
SCARB2-204ENST00000509994 C2orf71A6NGG8 1288 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 MEIS3P2A8K0S8 358 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 BTBD18B2RXH4 712 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 ZBTB39O15060 712 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 ASAP2O43150 1006 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 POMCP01189 267 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 ITGA4P13612 1032 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 HOXB8P17481 243 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms