RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 BEX3Q00994 111 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 CCDC122Q5T0U0 273 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 RUFY4Q6ZNE9 571 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 NUDT18Q6ZVK8 323 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 TMEM169Q96HH4 297 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 KANSL3Q9P2N6 904 aa5.55□□□□□ -1.52
PHF3-210ENST00000509876 CTAGE9A4FU28 777 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 RNF8O76064 485 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 FARP2O94887 1054 aaPredicted RBP5.54□□□□□ -1.52
PHF3-210ENST00000509876 ELNP15502 786 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 TAF3Q5VWG9 929 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 CC2D1AQ6P1N0 951 aaPredicted RBP5.54□□□□□ -1.52
PHF3-210ENST00000509876 CD302Q8IX05 232 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 C12orf42Q96LP6 360 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 SETD4Q9NVD3 440 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 DDX20Q9UHI6 824 aaKnown RBP5.54□□□□□ -1.52
PHF3-210ENST00000509876 EFCAB14O75071 495 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 INHAP05111 366 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 ATP2A2P16615 1042 aaKnown RBP5.54□□□□□ -1.52
PHF3-210ENST00000509876 KLRC1P26715 233 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 ZNF410Q86VK4 478 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 REPS2Q8NFH8 660 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 TNIP3Q96KP6 325 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 ITGB4P16144 1822 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 SYNJ2BP-COX16A0A087WUM0 186 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 PNPLA4P41247 253 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 NAMPTP43490 491 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 VAMP7P51809 220 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 ARL13BQ3SXY8 428 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 SPECC1LQ69YQ0 1117 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 TYW1BQ6NUM6 668 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 CEP128Q6ZU80 1094 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 CCDC186Q7Z3E2 898 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 NME8Q8N427 588 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 FBXL16Q8N461 479 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 FAM149B1Q96BN6 582 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 COX16Q9P0S2 106 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 NUP188Q5SRE5 1749 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 PP2D1A8MPX8 630 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 SLC16A3O15427 465 aaKnown RBP5.54□□□□□ -1.52
PHF3-210ENST00000509876 LGALS2P05162 132 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 AXLP30530 894 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 IFFO1Q0D2I5 559 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 PPP1R7Q15435 360 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 ARHGAP15Q53QZ3 475 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 C4orf19Q8IY42 314 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 TNS4Q8IZW8 715 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 BRI3BPQ8WY22 251 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 HAUS1Q96CS2 278 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 FAM217BQ9NTX9 383 aaPredicted RBP5.54□□□□□ -1.52
PHF3-210ENST00000509876 RNF186Q9NXI6 227 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 NRCAMQ92823 1304 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 PIK3CDO00329 1044 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 EIF3DO15371 548 aaKnown RBP eCLIP5.54□□□□□ -1.52
PHF3-210ENST00000509876 CYP3A4P08684 503 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 RALAP11233 206 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 PKP1Q13835 747 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 HLTFQ14527 1009 aaKnown RBP eCLIP5.54□□□□□ -1.521e-7■■□□□ 11.8
PHF3-210ENST00000509876 SH3D19Q5HYK7 790 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 MAP7D3Q8IWC1 876 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 CENPHQ9H3R5 247 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 NRBP1Q9UHY1 535 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 LCMT1Q9UIC8 334 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 DBR1Q9UK59 544 aaKnown RBP5.54□□□□□ -1.52
PHF3-210ENST00000509876 DIS3Q9Y2L1 958 aaKnown RBP5.54□□□□□ -1.52
PHF3-210ENST00000509876 NFASCO94856 1347 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 EMSYQ7Z589 1322 aa5.54□□□□□ -1.52
PHF3-210ENST00000509876 A0A087WWV3 80 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 PRRG1O14668 218 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 CLTAP09496 248 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 CYP11B2P19099 503 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 XPAP23025 273 aaPredicted RBP5.53□□□□□ -1.52
PHF3-210ENST00000509876 PRKCZQ05513 592 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 PRAMEF19Q5SWL8 479 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 LBX2Q6XYB7 198 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 SH3BP5LQ7L8J4 393 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 KIAA1524Q8TCG1 905 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 SREK1Q8WXA9 508 aaKnown RBP5.53□□□□□ -1.52
PHF3-210ENST00000509876 UBXN4Q92575 508 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 SAAL1Q96ER3 474 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 REEP2Q9BRK0 252 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 FBXO2Q9UK22 296 aaPredicted RBP5.53□□□□□ -1.52
PHF3-210ENST00000509876 CPSF3Q9UKF6 684 aaKnown RBP5.53□□□□□ -1.52
PHF3-210ENST00000509876 A8MXQ7 604 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 ODC1P11926 461 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 INSRRP14616 1297 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 HSPA6P17066 643 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 MAGEA1P43355 309 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 OR6B2Q6IFH4 312 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 CCDC91Q7Z6B0 441 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 SMYD4Q8IYR2 804 aaPredicted RBP5.53□□□□□ -1.52
PHF3-210ENST00000509876 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.53□□□□□ -1.52
PHF3-210ENST00000509876 SECISBP2LQ93073 1101 aaKnown RBP5.53□□□□□ -1.52
PHF3-210ENST00000509876 DDX50Q9BQ39 737 aaKnown RBP5.53□□□□□ -1.52
PHF3-210ENST00000509876 SENP7Q9BQF6 1050 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 PDXKO00764 312 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 SLC37A4O43826 429 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 PARNO95453 639 aaKnown RBP5.53□□□□□ -1.52
PHF3-210ENST00000509876 URODP06132 367 aa5.53□□□□□ -1.52
PHF3-210ENST00000509876 RNASE9P60153 205 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms