RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 RLFQ13129 1914 aa8.56□□□□□ -1.04
SSBP2-213ENST00000509743 PARP14Q460N5 1801 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 CCL15-CCL14A0A0B4J2E2 113 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 GSTTP1A0A1W2PQM5 241 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 RCCD1A6NED2 376 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 PDHXO00330 501 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 NOP56O00567 594 aaKnown RBP8.55□□□□□ -1.04
SSBP2-213ENST00000509743 ZNF263O14978 683 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 HNRNPDLO14979 420 aaKnown RBP8.55□□□□□ -1.04
SSBP2-213ENST00000509743 STRNO43815 780 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 PEX10O60683 326 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 MAFO75444 373 aaPredicted RBP8.55□□□□□ -1.04
SSBP2-213ENST00000509743 LGR5O75473 907 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 PIGRP01833 764 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 TRIM49P0CI25 452 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 TRIM49CP0CI26 452 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 ZBTB48P10074 688 aaPredicted RBP8.55□□□□□ -1.04
SSBP2-213ENST00000509743 ACTN1P12814 892 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 GTF2H1P32780 548 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 TCF7P36402 384 aaPredicted RBP8.55□□□□□ -1.04
SSBP2-213ENST00000509743 NAMPTP43490 491 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 STAT5BP51692 787 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 CYP27A1Q02318 531 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 STRN3Q13033 797 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 TARBP2Q15633 366 aaKnown RBP8.55□□□□□ -1.04
SSBP2-213ENST00000509743 SNRNP35Q16560 246 aaKnown RBP8.55□□□□□ -1.04
SSBP2-213ENST00000509743 CCL15Q16663 113 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 CELF3Q5SZQ8 465 aaKnown RBP8.55□□□□□ -1.04
SSBP2-213ENST00000509743 WDR78Q5VTH9 848 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 IQCEQ6IPM2 695 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 TRMT1LQ7Z2T5 733 aaKnown RBP8.55□□□□□ -1.04
SSBP2-213ENST00000509743 SRGAP1Q7Z6B7 1085 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 ZNF710Q8N1W2 664 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 RNF10Q8N5U6 811 aaKnown RBP8.55□□□□□ -1.04
SSBP2-213ENST00000509743 C2orf69Q8N8R5 385 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 DEPTORQ8TB45 409 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 SCFD2Q8WU76 684 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 BBXQ8WY36 941 aaPredicted RBP8.55□□□□□ -1.04
SSBP2-213ENST00000509743 UBXN4Q92575 508 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 BICD1Q96G01 975 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 MS4A4AQ96JQ5 239 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 FBXL18Q96ME1 805 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 PCYT2Q99447 389 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 JPH2Q9BR39 696 aaPredicted RBP8.55□□□□□ -1.04
SSBP2-213ENST00000509743 CBWD1Q9BRT8 395 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 CARD6Q9BX69 1037 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 STK33Q9BYT3 514 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 PCIF1Q9H4Z3 704 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 GBA2Q9HCG7 927 aaPredicted RBP8.55□□□□□ -1.04
SSBP2-213ENST00000509743 TRIM10Q9UDY6 481 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 DDX41Q9UJV9 622 aaKnown RBP8.55□□□□□ -1.04
SSBP2-213ENST00000509743 USP20Q9Y2K6 914 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 IVNS1ABPQ9Y6Y0 642 aa8.55□□□□□ -1.04
SSBP2-213ENST00000509743 EMSYQ7Z589 1322 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 OTOFQ9HC10 1997 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 MACROD2A1Z1Q3 448 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 BTNL10A8MVZ5 291 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 ANKRD63C9JTQ0 380 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 F8VZ95 297 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 SORBS3O60504 671 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 ABL1P00519 1130 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 PGK2P07205 417 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 ATP4AP20648 1035 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 SOX5P35711 763 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 ARL2P36404 184 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 LIG4P49917 911 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 MXI1P50539 228 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 EFNA5P52803 228 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 AMPD2Q01433 879 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 APBA1Q02410 837 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 GFPT1Q06210 699 aaPredicted RBP8.54□□□□□ -1.04
SSBP2-213ENST00000509743 TTLL4Q14679 1199 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 ELF2Q15723 593 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 IFI16Q16666 785 aaKnown RBP8.54□□□□□ -1.04
SSBP2-213ENST00000509743 Q3C1V9 767 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 CBWD6Q4V339 395 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 EPC2Q52LR7 807 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 CBWD3Q5JTY5 395 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 CBWD5Q5RIA9 395 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 IER5Q5VY09 327 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 PAPD7Q5XG87 772 aaKnown RBP8.54□□□□□ -1.04
SSBP2-213ENST00000509743 MAP1SQ66K74 1059 aaPredicted RBP8.54□□□□□ -1.04
SSBP2-213ENST00000509743 SLFN12LQ6IEE8 588 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 CCDC62Q6P9F0 684 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 PLPPR4Q7Z2D5 763 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 IRF2BP2Q7Z5L9 587 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 ZNF467Q7Z7K2 595 aaPredicted RBP8.54□□□□□ -1.04
SSBP2-213ENST00000509743 DHX37Q8IY37 1157 aaKnown RBP8.54□□□□□ -1.04
SSBP2-213ENST00000509743 GPD1LQ8N335 351 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 PDCL2Q8N4E4 241 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 ZNF526Q8TF50 670 aaPredicted RBP8.54□□□□□ -1.04
SSBP2-213ENST00000509743 ATP8B4Q8TF62 1192 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 TCP11Q8WWU5 503 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 TSC1Q92574 1164 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 GOLGA1Q92805 767 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 RPGRIP1Q96KN7 1286 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 MFSD14AQ96MC6 490 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 NOX5Q96PH1 765 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 CEP89Q96ST8 783 aa8.54□□□□□ -1.04
SSBP2-213ENST00000509743 PARK7Q99497 189 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms