RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PTPN5P54829 565 aa17.89■□□□□ 0.45
RAB40C-202ENST00000509637 INF2Q27J81 1249 aa17.89■□□□□ 0.45
RAB40C-202ENST00000509637 RHPN2Q8IUC4 686 aa17.89■□□□□ 0.45
RAB40C-202ENST00000509637 SUGP1Q8IWZ8 645 aaKnown RBP17.89■□□□□ 0.45
RAB40C-202ENST00000509637 DAGLBQ8NCG7 672 aa17.89■□□□□ 0.45
RAB40C-202ENST00000509637 RDM1Q8NG50 284 aa17.89■□□□□ 0.45
RAB40C-202ENST00000509637 OXER1Q8TDS5 423 aa17.89■□□□□ 0.45
RAB40C-202ENST00000509637 HAS1Q92839 578 aa17.89■□□□□ 0.45
RAB40C-202ENST00000509637 SCLT1Q96NL6 688 aa17.89■□□□□ 0.45
RAB40C-202ENST00000509637 CHST12Q9NRB3 414 aa17.89■□□□□ 0.45
RAB40C-202ENST00000509637 TSHZ2Q9NRE2 1034 aa17.89■□□□□ 0.45
RAB40C-202ENST00000509637 FAM105AQ9NUU6 356 aa17.89■□□□□ 0.45
RAB40C-202ENST00000509637 ALDH7A1P49419 539 aaKnown RBP17.88■□□□□ 0.45
RAB40C-202ENST00000509637 SSRP1Q08945 709 aaKnown RBP17.88■□□□□ 0.45
RAB40C-202ENST00000509637 NOMO2Q5JPE7 1267 aa17.88■□□□□ 0.45
RAB40C-202ENST00000509637 DDX53Q86TM3 631 aaKnown RBP17.88■□□□□ 0.45
RAB40C-202ENST00000509637 ZNF710Q8N1W2 664 aa17.88■□□□□ 0.45
RAB40C-202ENST00000509637 TMEM105Q8N8V8 129 aa17.88■□□□□ 0.45
RAB40C-202ENST00000509637 KCNMB3Q9NPA1 279 aa17.88■□□□□ 0.45
RAB40C-202ENST00000509637 DACT1Q9NYF0 836 aa17.88■□□□□ 0.45
RAB40C-202ENST00000509637 LIMD1Q9UGP4 676 aa17.88■□□□□ 0.45
RAB40C-202ENST00000509637 PIN4Q9Y237 131 aaKnown RBP17.88■□□□□ 0.45
RAB40C-202ENST00000509637 INPP5FQ9Y2H2 1132 aa17.88■□□□□ 0.45
RAB40C-202ENST00000509637 IRAK3Q9Y616 596 aa17.88■□□□□ 0.45
RAB40C-202ENST00000509637 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.87■□□□□ 0.45
RAB40C-202ENST00000509637 FSD2A1L4K1 749 aa17.87■□□□□ 0.45
RAB40C-202ENST00000509637 FAM205CA6NFA0 338 aa17.87■□□□□ 0.45
RAB40C-202ENST00000509637 H0Y858 1186 aa17.87■□□□□ 0.45
RAB40C-202ENST00000509637 STK3Q13188 491 aa17.87■□□□□ 0.45
RAB40C-202ENST00000509637 PTPN14Q15678 1187 aa17.87■□□□□ 0.45
RAB40C-202ENST00000509637 TWF2Q6IBS0 349 aaKnown RBP17.87■□□□□ 0.45
RAB40C-202ENST00000509637 TAS1R1Q7RTX1 841 aa17.87■□□□□ 0.45
RAB40C-202ENST00000509637 MRPL10Q7Z7H8 261 aaKnown RBP17.87■□□□□ 0.45
RAB40C-202ENST00000509637 ZNF410Q86VK4 478 aa17.87■□□□□ 0.45
RAB40C-202ENST00000509637 TMEM143Q96AN5 459 aa17.87■□□□□ 0.45
RAB40C-202ENST00000509637 NLRP4Q96MN2 994 aa17.87■□□□□ 0.45
RAB40C-202ENST00000509637 BMP2KQ9NSY1 1161 aaPredicted RBP17.87■□□□□ 0.45
RAB40C-202ENST00000509637 PCDHB2Q9Y5E7 798 aa17.87■□□□□ 0.45
RAB40C-202ENST00000509637 DENND4AQ7Z401 1863 aa17.86■□□□□ 0.45
RAB40C-202ENST00000509637 C2orf16Q68DN1 1984 aa17.86■□□□□ 0.45
RAB40C-202ENST00000509637 F8W810 466 aa17.86■□□□□ 0.45
RAB40C-202ENST00000509637 PSMC5P62195 406 aa17.86■□□□□ 0.45
RAB40C-202ENST00000509637 ITIH3Q06033 890 aa17.86■□□□□ 0.45
RAB40C-202ENST00000509637 TPRNQ4KMQ1 711 aa17.86■□□□□ 0.45
RAB40C-202ENST00000509637 MOXD1Q6UVY6 613 aa17.86■□□□□ 0.45
RAB40C-202ENST00000509637 TMC5Q6UXY8 1006 aa17.86■□□□□ 0.45
RAB40C-202ENST00000509637 PRPF31Q8WWY3 499 aaKnown RBP17.86■□□□□ 0.45
RAB40C-202ENST00000509637 ZNF274Q96GC6 653 aaPredicted RBP17.86■□□□□ 0.45
RAB40C-202ENST00000509637 TMEM169Q96HH4 297 aa17.86■□□□□ 0.45
RAB40C-202ENST00000509637 KLHL5Q96PQ7 755 aa17.86■□□□□ 0.45
RAB40C-202ENST00000509637 MRPL9Q9BYD2 267 aaKnown RBP17.86■□□□□ 0.45
RAB40C-202ENST00000509637 GBP3Q9H0R5 595 aa17.86■□□□□ 0.45
RAB40C-202ENST00000509637 RNF39Q9H2S5 420 aa17.86■□□□□ 0.45
RAB40C-202ENST00000509637 DHX33Q9H6R0 707 aaKnown RBP17.86■□□□□ 0.45
RAB40C-202ENST00000509637 CYP26B1Q9NR63 512 aa17.86■□□□□ 0.45
RAB40C-202ENST00000509637 MIOSQ9NXC5 875 aa17.86■□□□□ 0.45
RAB40C-202ENST00000509637 RGL1Q9NZL6 768 aa17.86■□□□□ 0.45
RAB40C-202ENST00000509637 DDX25Q9UHL0 483 aaKnown RBP17.86■□□□□ 0.45
RAB40C-202ENST00000509637 USP34Q70CQ2 3546 aa17.85■□□□□ 0.45
RAB40C-202ENST00000509637 DEXIO95424 95 aa17.85■□□□□ 0.45
RAB40C-202ENST00000509637 CTDNEP1O95476 244 aa17.85■□□□□ 0.45
RAB40C-202ENST00000509637 EFEMP2O95967 443 aa17.85■□□□□ 0.45
RAB40C-202ENST00000509637 PSMA5P28066 241 aa17.85■□□□□ 0.45
RAB40C-202ENST00000509637 CA8P35219 290 aa17.85■□□□□ 0.45
RAB40C-202ENST00000509637 SPIRE1Q08AE8 756 aa17.85■□□□□ 0.45
RAB40C-202ENST00000509637 PPP2R5CQ13362 524 aa17.85■□□□□ 0.45
RAB40C-202ENST00000509637 KIAA1841Q6NSI8 718 aa17.85■□□□□ 0.45
RAB40C-202ENST00000509637 POTEGQ6S5H5 508 aa17.85■□□□□ 0.45
RAB40C-202ENST00000509637 CATSPER4Q7RTX7 472 aa17.85■□□□□ 0.45
RAB40C-202ENST00000509637 SMG8Q8ND04 991 aaKnown RBP17.85■□□□□ 0.45
RAB40C-202ENST00000509637 PHF20Q9BVI0 1012 aa17.85■□□□□ 0.45
RAB40C-202ENST00000509637 XPNPEP1Q9NQW7 623 aa17.85■□□□□ 0.45
RAB40C-202ENST00000509637 AGPAT5Q9NUQ2 364 aa17.85■□□□□ 0.45
RAB40C-202ENST00000509637 MARCH5Q9NX47 278 aa17.85■□□□□ 0.45
RAB40C-202ENST00000509637 SORCS3Q9UPU3 1222 aa17.85■□□□□ 0.45
RAB40C-202ENST00000509637 WNT7AO00755 349 aa17.84■□□□□ 0.45
RAB40C-202ENST00000509637 N4BP1O75113 896 aaKnown RBP17.84■□□□□ 0.45
RAB40C-202ENST00000509637 CNPP09543 421 aaKnown RBP17.84■□□□□ 0.45
RAB40C-202ENST00000509637 SRGAP2BP0DMP2 458 aa17.84■□□□□ 0.45
RAB40C-202ENST00000509637 SFPQP23246 707 aaKnown RBP eCLIP17.84■□□□□ 0.45
RAB40C-202ENST00000509637 POLGP54098 1239 aaPredicted RBP17.84■□□□□ 0.45
RAB40C-202ENST00000509637 SCRN1Q12765 414 aa17.84■□□□□ 0.45
RAB40C-202ENST00000509637 NONOQ15233 471 aaKnown RBP eCLIP17.84■□□□□ 0.451e-6■■■■□ 24.9
RAB40C-202ENST00000509637 LETM2Q2VYF4 491 aa17.84■□□□□ 0.45
RAB40C-202ENST00000509637 CES5AQ6NT32 575 aa17.84■□□□□ 0.45
RAB40C-202ENST00000509637 ZDHHC14Q8IZN3 488 aa17.84■□□□□ 0.45
RAB40C-202ENST00000509637 COL4A3BPQ9Y5P4 624 aa17.84■□□□□ 0.45
RAB40C-202ENST00000509637 A0A087WWV3 80 aa17.83■□□□□ 0.44
RAB40C-202ENST00000509637 PI15O43692 258 aa17.83■□□□□ 0.44
RAB40C-202ENST00000509637 SSBP05455 408 aaKnown RBP eCLIP17.83■□□□□ 0.44
RAB40C-202ENST00000509637 SRGAP2CP0DJJ0 459 aa17.83■□□□□ 0.44
RAB40C-202ENST00000509637 MYBP10242 640 aa17.83■□□□□ 0.44
RAB40C-202ENST00000509637 NPR3P17342 541 aa17.83■□□□□ 0.44
RAB40C-202ENST00000509637 MTHFRP42898 656 aa17.83■□□□□ 0.44
RAB40C-202ENST00000509637 QARSP47897 775 aaKnown RBP17.83■□□□□ 0.44
RAB40C-202ENST00000509637 CLCN4P51793 760 aa17.83■□□□□ 0.44
RAB40C-202ENST00000509637 LAMTOR4Q0VGL1 99 aa17.83■□□□□ 0.44
RAB40C-202ENST00000509637 GLB1LQ6UWU2 654 aa17.83■□□□□ 0.44
RAB40C-202ENST00000509637 GPR149Q86SP6 731 aa17.83■□□□□ 0.44
RAB40C-202ENST00000509637 ZBTB33Q86T24 672 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms