RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 FAM105AQ9NUU6 356 aa15.05■□□□□ -0
DDX41-210ENST00000509576 PUF60Q9UHX1 559 aaKnown RBP15.05■□□□□ -0
DDX41-210ENST00000509576 PCDHA4Q9UN74 947 aa15.05■□□□□ -0
DDX41-210ENST00000509576 FAM186AA6NE01 2351 aa15.05■□□□□ -0
DDX41-210ENST00000509576 FAM205CA6NFA0 338 aa15.04■□□□□ -0
DDX41-210ENST00000509576 F8W810 466 aa15.04■□□□□ -0
DDX41-210ENST00000509576 H0Y858 1186 aa15.04■□□□□ -0
DDX41-210ENST00000509576 ZBTB39O15060 712 aa15.04■□□□□ -0
DDX41-210ENST00000509576 LILRB3O75022 631 aa15.04■□□□□ -0
DDX41-210ENST00000509576 CTSAP10619 480 aa15.04■□□□□ -0
DDX41-210ENST00000509576 HOXA11P31270 313 aaPredicted RBP15.04■□□□□ -0
DDX41-210ENST00000509576 NLRP5P59047 1200 aa15.04■□□□□ -0
DDX41-210ENST00000509576 PTPN14Q15678 1187 aa15.04■□□□□ -0
DDX41-210ENST00000509576 RHPN2Q8IUC4 686 aa15.04■□□□□ -0
DDX41-210ENST00000509576 DAGLBQ8NCG7 672 aa15.04■□□□□ -0
DDX41-210ENST00000509576 CCDC148Q8NFR7 591 aa15.04■□□□□ -0
DDX41-210ENST00000509576 BICD2Q8TD16 824 aa15.04■□□□□ -0
DDX41-210ENST00000509576 ZSWIM6Q9HCJ5 1215 aa15.04■□□□□ -0
DDX41-210ENST00000509576 KCNMB3Q9NPA1 279 aa15.04■□□□□ -0
DDX41-210ENST00000509576 RNF216Q9NWF9 866 aaPredicted RBP15.04■□□□□ -0
DDX41-210ENST00000509576 SUCLA2Q9P2R7 463 aaPredicted RBP15.04■□□□□ -0
DDX41-210ENST00000509576 KCNJ14Q9UNX9 436 aa15.04■□□□□ -0
DDX41-210ENST00000509576 PIN4Q9Y237 131 aaKnown RBP15.04■□□□□ -0
DDX41-210ENST00000509576 INPP5FQ9Y2H2 1132 aa15.04■□□□□ -0
DDX41-210ENST00000509576 IRAK3Q9Y616 596 aa15.04■□□□□ -0
DDX41-210ENST00000509576 COL4A3Q01955 1670 aa15.03■□□□□ -0
DDX41-210ENST00000509576 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.03■□□□□ -0
DDX41-210ENST00000509576 FSD2A1L4K1 749 aa15.03■□□□□ -0
DDX41-210ENST00000509576 ZNF623O75123 536 aa15.03■□□□□ -0
DDX41-210ENST00000509576 KRT17Q04695 432 aa15.03■□□□□ -0
DDX41-210ENST00000509576 INF2Q27J81 1249 aa15.03■□□□□ -0
DDX41-210ENST00000509576 KIAA1841Q6NSI8 718 aa15.03■□□□□ -0
DDX41-210ENST00000509576 DDX53Q86TM3 631 aaKnown RBP15.03■□□□□ -0
DDX41-210ENST00000509576 BLIDQ8IZY5 108 aa15.03■□□□□ -0
DDX41-210ENST00000509576 RDM1Q8NG50 284 aa15.03■□□□□ -0
DDX41-210ENST00000509576 OXER1Q8TDS5 423 aa15.03■□□□□ -0
DDX41-210ENST00000509576 HAS1Q92839 578 aa15.03■□□□□ -0
DDX41-210ENST00000509576 NLRP4Q96MN2 994 aa15.03■□□□□ -0
DDX41-210ENST00000509576 SCLT1Q96NL6 688 aa15.03■□□□□ -0
DDX41-210ENST00000509576 GCOM2Q9BZD3 368 aaPredicted RBP15.03■□□□□ -0
DDX41-210ENST00000509576 CHST12Q9NRB3 414 aa15.03■□□□□ -0
DDX41-210ENST00000509576 BMP2KQ9NSY1 1161 aaPredicted RBP15.03■□□□□ -0
DDX41-210ENST00000509576 MARCH5Q9NX47 278 aa15.03■□□□□ -0
DDX41-210ENST00000509576 TCEAL9Q9UHQ7 104 aa15.03■□□□□ -0
DDX41-210ENST00000509576 SORCS3Q9UPU3 1222 aa15.03■□□□□ -0
DDX41-210ENST00000509576 TRIP11Q15643 1979 aa15.03■□□□□ -0
DDX41-210ENST00000509576 VWA8A3KMH1 1905 aa15.03■□□□□ -0
DDX41-210ENST00000509576 PTPRZ1P23471 2315 aaPredicted RBP15.03■□□□□ -0
DDX41-210ENST00000509576 DDX11L8A8MPP1 907 aa15.02■□□□□ -0
DDX41-210ENST00000509576 N4BP1O75113 896 aaKnown RBP15.02■□□□□ -0
DDX41-210ENST00000509576 EFEMP2O95967 443 aa15.02■□□□□ -0
DDX41-210ENST00000509576 ITIH3Q06033 890 aa15.02■□□□□ -0
DDX41-210ENST00000509576 SPIRE1Q08AE8 756 aa15.02■□□□□ -0
DDX41-210ENST00000509576 NOMO2Q5JPE7 1267 aa15.02■□□□□ -0
DDX41-210ENST00000509576 CWF19L1Q69YN2 538 aaKnown RBP15.02■□□□□ -0
DDX41-210ENST00000509576 TWF2Q6IBS0 349 aaKnown RBP15.02■□□□□ -0
DDX41-210ENST00000509576 POTEGQ6S5H5 508 aa15.02■□□□□ -0
DDX41-210ENST00000509576 TMC5Q6UXY8 1006 aa15.02■□□□□ -0
DDX41-210ENST00000509576 RUFY3Q7L099 469 aa15.02■□□□□ -0
DDX41-210ENST00000509576 TAS1R1Q7RTX1 841 aa15.02■□□□□ -0
DDX41-210ENST00000509576 ZNF410Q86VK4 478 aa15.02■□□□□ -0
DDX41-210ENST00000509576 TMEM169Q96HH4 297 aa15.02■□□□□ -0
DDX41-210ENST00000509576 MRPL9Q9BYD2 267 aaKnown RBP15.02■□□□□ -0
DDX41-210ENST00000509576 DHX33Q9H6R0 707 aaKnown RBP15.02■□□□□ -0
DDX41-210ENST00000509576 AGPAT5Q9NUQ2 364 aa15.02■□□□□ -0
DDX41-210ENST00000509576 DACT1Q9NYF0 836 aa15.02■□□□□ -0
DDX41-210ENST00000509576 LIMD1Q9UGP4 676 aa15.02■□□□□ -0
DDX41-210ENST00000509576 DMXL1Q9Y485 3027 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 NOTCH4Q99466 2003 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 WNT7AO00755 349 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 CNPP09543 421 aaKnown RBP15.01□□□□□ -0.01
DDX41-210ENST00000509576 ALDH7A1P49419 539 aaKnown RBP15.01□□□□□ -0.01
DDX41-210ENST00000509576 AKAP17AQ02040 695 aaKnown RBP15.01□□□□□ -0.01
DDX41-210ENST00000509576 STK3Q13188 491 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 PPP2R5CQ13362 524 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 TPRNQ4KMQ1 711 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 MOXD1Q6UVY6 613 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 ASCL5Q7RTU5 278 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 MRPL10Q7Z7H8 261 aaKnown RBP15.01□□□□□ -0.01
DDX41-210ENST00000509576 ZNF710Q8N1W2 664 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 SMG8Q8ND04 991 aaKnown RBP15.01□□□□□ -0.01
DDX41-210ENST00000509576 TMEM143Q96AN5 459 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 KLHL5Q96PQ7 755 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 GBP3Q9H0R5 595 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 RNF39Q9H2S5 420 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 XPNPEP1Q9NQW7 623 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 CYP26B1Q9NR63 512 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 MIOSQ9NXC5 875 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 RGL1Q9NZL6 768 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 DDX25Q9UHL0 483 aaKnown RBP15.01□□□□□ -0.01
DDX41-210ENST00000509576 PCDHB2Q9Y5E7 798 aa15.01□□□□□ -0.01
DDX41-210ENST00000509576 FANCMQ8IYD8 2048 aa15□□□□□ -0.01
DDX41-210ENST00000509576 MYH15Q9Y2K3 1946 aa15□□□□□ -0.01
DDX41-210ENST00000509576 GVINP1Q7Z2Y8 2422 aa15□□□□□ -0.01
DDX41-210ENST00000509576 CTDNEP1O95476 244 aa15□□□□□ -0.01
DDX41-210ENST00000509576 SRGAP2BP0DMP2 458 aa15□□□□□ -0.01
DDX41-210ENST00000509576 NPR3P17342 541 aa15□□□□□ -0.01
DDX41-210ENST00000509576 SFPQP23246 707 aaKnown RBP eCLIP15□□□□□ -0.01
DDX41-210ENST00000509576 CA8P35219 290 aa15□□□□□ -0.01
DDX41-210ENST00000509576 CLCN4P51793 760 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms