RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 LPPQ93052 612 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 POP1Q99575 1024 aaKnown RBP13.98□□□□□ -0.17
PDPN-208ENST00000509009 HSD17B14Q9BPX1 270 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 LXNQ9BS40 222 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 MINDY3Q9H8M7 445 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 BRMS1Q9HCU9 246 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 PCDHA12Q9UN75 941 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 PIN4Q9Y237 131 aaKnown RBP13.98□□□□□ -0.17
PDPN-208ENST00000509009 MEIS3P2A8K0S8 358 aa13.97□□□□□ -0.17
PDPN-208ENST00000509009 HIDE1A8MVS5 230 aa13.97□□□□□ -0.17
PDPN-208ENST00000509009 PRR33A8MZF0 331 aa13.97□□□□□ -0.17
PDPN-208ENST00000509009 NT5C1B-RDH14C9J2C7 533 aa13.97□□□□□ -0.17
PDPN-208ENST00000509009 ASAP2O43150 1006 aa13.97□□□□□ -0.17
PDPN-208ENST00000509009 OFD1O75665 1012 aa13.97□□□□□ -0.17
PDPN-208ENST00000509009 HOXA11P31270 313 aaPredicted RBP13.97□□□□□ -0.17
PDPN-208ENST00000509009 ALDH7A1P49419 539 aaKnown RBP13.97□□□□□ -0.17
PDPN-208ENST00000509009 POLGP54098 1239 aaPredicted RBP13.97□□□□□ -0.17
PDPN-208ENST00000509009 BCAR1P56945 870 aa13.97□□□□□ -0.17
PDPN-208ENST00000509009 LONRF3Q496Y0 759 aa13.97□□□□□ -0.17
PDPN-208ENST00000509009 TMC7Q7Z402 723 aa13.97□□□□□ -0.17
PDPN-208ENST00000509009 SRGAP1Q7Z6B7 1085 aa13.97□□□□□ -0.17
PDPN-208ENST00000509009 RNF135Q8IUD6 432 aa13.97□□□□□ -0.17
PDPN-208ENST00000509009 MRPL43Q8N983 215 aaKnown RBP13.97□□□□□ -0.17
PDPN-208ENST00000509009 PSPC1Q8WXF1 523 aaKnown RBP13.97□□□□□ -0.17
PDPN-208ENST00000509009 TCF25Q9BQ70 676 aa13.97□□□□□ -0.17
PDPN-208ENST00000509009 EIF2AK1Q9BQI3 630 aaKnown RBP13.97□□□□□ -0.17
PDPN-208ENST00000509009 MRPL9Q9BYD2 267 aaKnown RBP13.97□□□□□ -0.17
PDPN-208ENST00000509009 ENTPD7Q9NQZ7 604 aa13.97□□□□□ -0.17
PDPN-208ENST00000509009 FAM105AQ9NUU6 356 aa13.97□□□□□ -0.17
PDPN-208ENST00000509009 USP15Q9Y4E8 981 aaPredicted RBP13.97□□□□□ -0.17
PDPN-208ENST00000509009 PLXNA4Q9HCM2 1894 aa13.97□□□□□ -0.17
PDPN-208ENST00000509009 FSD2A1L4K1 749 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 WNT7AO00755 349 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 LYPLA2O95372 231 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 FOSBP53539 338 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 CYP4A11Q02928 519 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 ST3GAL1Q11201 340 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 EMC2Q15006 297 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 NOMO2Q5JPE7 1267 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 GLB1LQ6UWU2 654 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 MRPL10Q7Z7H8 261 aaKnown RBP13.96□□□□□ -0.17
PDPN-208ENST00000509009 FERMT3Q86UX7 667 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 DIS3L2Q8IYB7 885 aaKnown RBP13.96□□□□□ -0.17
PDPN-208ENST00000509009 TCP11Q8WWU5 503 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 RSPH1Q8WYR4 309 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 SUSD6Q92537 303 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 MTMR9Q96QG7 549 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 S1PR5Q9H228 398 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 NRDE2Q9H7Z3 1164 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 TTC12Q9H892 705 aaPredicted RBP13.96□□□□□ -0.17
PDPN-208ENST00000509009 AGPAT5Q9NUQ2 364 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 ARIH1Q9Y4X5 557 aaPredicted RBP13.96□□□□□ -0.17
PDPN-208ENST00000509009 PCDHB2Q9Y5E7 798 aa13.96□□□□□ -0.17
PDPN-208ENST00000509009 C2orf71A6NGG8 1288 aa13.95□□□□□ -0.18
PDPN-208ENST00000509009 LOC730098B7Z3J9 87 aa13.95□□□□□ -0.18
PDPN-208ENST00000509009 GAS2O43903 313 aaKnown RBP13.95□□□□□ -0.18
PDPN-208ENST00000509009 CXCL14O95715 111 aa13.95□□□□□ -0.18
PDPN-208ENST00000509009 TECP42680 631 aa13.95□□□□□ -0.18
PDPN-208ENST00000509009 TXKP42681 527 aa13.95□□□□□ -0.18
PDPN-208ENST00000509009 RAB27AP51159 221 aa13.95□□□□□ -0.18
PDPN-208ENST00000509009 TRIM29Q14134 588 aa13.95□□□□□ -0.18
PDPN-208ENST00000509009 CALCRLQ16602 461 aa13.95□□□□□ -0.18
PDPN-208ENST00000509009 HERC4Q5GLZ8 1057 aaPredicted RBP13.95□□□□□ -0.18
PDPN-208ENST00000509009 UBXN11Q5T124 520 aa13.95□□□□□ -0.18
PDPN-208ENST00000509009 ANKRD54Q6NXT1 300 aa13.95□□□□□ -0.18
PDPN-208ENST00000509009 SYCE2Q6PIF2 218 aa13.95□□□□□ -0.18
PDPN-208ENST00000509009 AGMOQ6ZNB7 445 aa13.95□□□□□ -0.18
PDPN-208ENST00000509009 PGBD4Q96DM1 585 aa13.95□□□□□ -0.18
PDPN-208ENST00000509009 XPNPEP1Q9NQW7 623 aa13.95□□□□□ -0.18
PDPN-208ENST00000509009 BMP2KQ9NSY1 1161 aaPredicted RBP13.95□□□□□ -0.18
PDPN-208ENST00000509009 ANKEF1Q9NU02 776 aa13.95□□□□□ -0.18
PDPN-208ENST00000509009 TBC1D13Q9NVG8 400 aa13.95□□□□□ -0.18
PDPN-208ENST00000509009 LIMCH1Q9UPQ0 1083 aa13.95□□□□□ -0.18
PDPN-208ENST00000509009 A0A087WWV3 80 aa13.94□□□□□ -0.18
PDPN-208ENST00000509009 GALTP07902 379 aa13.94□□□□□ -0.18
PDPN-208ENST00000509009 PLA2G5P39877 138 aa13.94□□□□□ -0.18
PDPN-208ENST00000509009 PTENP60484 403 aa13.94□□□□□ -0.18
PDPN-208ENST00000509009 SMC1AQ14683 1233 aaKnown RBP13.94□□□□□ -0.18
PDPN-208ENST00000509009 CBX2Q14781 532 aaPredicted RBP13.94□□□□□ -0.18
PDPN-208ENST00000509009 LLGL2Q6P1M3 1020 aa13.94□□□□□ -0.18
PDPN-208ENST00000509009 TMEM173Q86WV6 379 aaPredicted RBP13.94□□□□□ -0.18
PDPN-208ENST00000509009 ZNF280BQ86YH2 543 aa13.94□□□□□ -0.18
PDPN-208ENST00000509009 VPS52Q8N1B4 723 aa13.94□□□□□ -0.18
PDPN-208ENST00000509009 RNF149Q8NC42 400 aa13.94□□□□□ -0.18
PDPN-208ENST00000509009 FAM122AQ96E09 287 aa13.94□□□□□ -0.18
PDPN-208ENST00000509009 TMEM169Q96HH4 297 aa13.94□□□□□ -0.18
PDPN-208ENST00000509009 IGSF21Q96ID5 467 aa13.94□□□□□ -0.18
PDPN-208ENST00000509009 PHF7Q9BWX1 381 aaPredicted RBP13.94□□□□□ -0.18
PDPN-208ENST00000509009 TMEM60Q9H2L4 133 aa13.94□□□□□ -0.18
PDPN-208ENST00000509009 MUTYHQ9UIF7 546 aa13.94□□□□□ -0.18
PDPN-208ENST00000509009 INPP5FQ9Y2H2 1132 aa13.94□□□□□ -0.18
PDPN-208ENST00000509009 HCN4Q9Y3Q4 1203 aa13.94□□□□□ -0.18
PDPN-208ENST00000509009 CARNS1A5YM72 827 aa13.93□□□□□ -0.18
PDPN-208ENST00000509009 NEMFO60524 1076 aa13.93□□□□□ -0.18
PDPN-208ENST00000509009 CLASP2O75122 1294 aaKnown RBP13.93□□□□□ -0.18
PDPN-208ENST00000509009 ZC3H11AO75152 810 aaKnown RBP eCLIP13.93□□□□□ -0.18
PDPN-208ENST00000509009 XRCC6P12956 609 aaKnown RBP eCLIP13.93□□□□□ -0.18
PDPN-208ENST00000509009 HOXB8P17481 243 aaPredicted RBP13.93□□□□□ -0.18
PDPN-208ENST00000509009 ATP2B1P20020 1258 aa13.93□□□□□ -0.18
PDPN-208ENST00000509009 ARL2P36404 184 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms