RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 FAM105AQ9NUU6 356 aa24.62■■□□□ 1.53
PACRGL-220ENST00000508952 MEIS3P2A8K0S8 358 aa24.61■■□□□ 1.53
PACRGL-220ENST00000508952 PER2O15055 1255 aa24.61■■□□□ 1.53
PACRGL-220ENST00000508952 HMGN5P82970 282 aaKnown RBP24.61■■□□□ 1.53
PACRGL-220ENST00000508952 PLCB3Q01970 1234 aa24.61■■□□□ 1.53
PACRGL-220ENST00000508952 SRGAP1Q7Z6B7 1085 aa24.61■■□□□ 1.53
PACRGL-220ENST00000508952 GJD3Q8N144 294 aa24.61■■□□□ 1.53
PACRGL-220ENST00000508952 FBXO18Q8NFZ0 1043 aa24.61■■□□□ 1.53
PACRGL-220ENST00000508952 PIGOQ8TEQ8 1089 aa24.61■■□□□ 1.53
PACRGL-220ENST00000508952 MRPS27Q92552 414 aaKnown RBP24.61■■□□□ 1.53
PACRGL-220ENST00000508952 FAM50BQ9Y247 325 aa24.61■■□□□ 1.53
PACRGL-220ENST00000508952 FSCN2O14926 492 aa24.6■■□□□ 1.53
PACRGL-220ENST00000508952 GLP2RO95838 553 aa24.6■■□□□ 1.53
PACRGL-220ENST00000508952 RBM25P49756 843 aaKnown RBP24.6■■□□□ 1.53
PACRGL-220ENST00000508952 ZNF174Q15697 407 aa24.6■■□□□ 1.53
PACRGL-220ENST00000508952 PLPP4Q5VZY2 271 aa24.6■■□□□ 1.53
PACRGL-220ENST00000508952 FAM184AQ8NB25 1140 aa24.6■■□□□ 1.53
PACRGL-220ENST00000508952 CCDC43Q96MW1 224 aaKnown RBP24.6■■□□□ 1.53
PACRGL-220ENST00000508952 MRPL9Q9BYD2 267 aaKnown RBP24.6■■□□□ 1.53
PACRGL-220ENST00000508952 FOXP1Q9H334 677 aaPredicted RBP24.6■■□□□ 1.53
PACRGL-220ENST00000508952 ANKEF1Q9NU02 776 aa24.6■■□□□ 1.53
PACRGL-220ENST00000508952 SPG21Q9NZD8 308 aa24.6■■□□□ 1.53
PACRGL-220ENST00000508952 CLEC1BQ9P126 229 aa24.6■■□□□ 1.53
PACRGL-220ENST00000508952 CD207Q9UJ71 328 aa24.6■■□□□ 1.53
PACRGL-220ENST00000508952 LZTS1Q9Y250 596 aa24.6■■□□□ 1.53
PACRGL-220ENST00000508952 ASAP2O43150 1006 aa24.59■■□□□ 1.53
PACRGL-220ENST00000508952 MBTPS2O43462 519 aa24.59■■□□□ 1.53
PACRGL-220ENST00000508952 SKIP12755 728 aa24.59■■□□□ 1.53
PACRGL-220ENST00000508952 HOXA11P31270 313 aaPredicted RBP24.59■■□□□ 1.53
PACRGL-220ENST00000508952 PPM1AP35813 382 aa24.59■■□□□ 1.53
PACRGL-220ENST00000508952 RAB27AP51159 221 aa24.59■■□□□ 1.53
PACRGL-220ENST00000508952 RBM10P98175 930 aaKnown RBP24.59■■□□□ 1.53
PACRGL-220ENST00000508952 ENTPD7Q9NQZ7 604 aa24.59■■□□□ 1.53
PACRGL-220ENST00000508952 PUF60Q9UHX1 559 aaKnown RBP24.59■■□□□ 1.53
PACRGL-220ENST00000508952 BARX2Q9UMQ3 279 aaPredicted RBP24.59■■□□□ 1.53
PACRGL-220ENST00000508952 INPP5FQ9Y2H2 1132 aa24.59■■□□□ 1.53
PACRGL-220ENST00000508952 PCDHB2Q9Y5E7 798 aa24.59■■□□□ 1.53
PACRGL-220ENST00000508952 NT5C1B-RDH14C9J2C7 533 aa24.58■■□□□ 1.53
PACRGL-220ENST00000508952 ZNF623O75123 536 aa24.58■■□□□ 1.53
PACRGL-220ENST00000508952 SPATA31C1P0DKV0 1188 aa24.58■■□□□ 1.53
PACRGL-220ENST00000508952 RARRES1P49788 294 aa24.58■■□□□ 1.53
PACRGL-220ENST00000508952 ZP2Q05996 745 aa24.58■■□□□ 1.53
PACRGL-220ENST00000508952 SMAD4Q13485 552 aaKnown RBP24.58■■□□□ 1.53
PACRGL-220ENST00000508952 GNL2Q13823 731 aaKnown RBP24.58■■□□□ 1.53
PACRGL-220ENST00000508952 SMAD2Q15796 467 aaKnown RBP24.58■■□□□ 1.53
PACRGL-220ENST00000508952 SLC39A11Q8N1S5 342 aa24.58■■□□□ 1.53
PACRGL-220ENST00000508952 ASAP3Q8TDY4 903 aa24.58■■□□□ 1.53
PACRGL-220ENST00000508952 MSLNLQ96KJ4 702 aa24.58■■□□□ 1.53
PACRGL-220ENST00000508952 TCF25Q9BQ70 676 aa24.58■■□□□ 1.53
PACRGL-220ENST00000508952 C1QTNF1Q9BXJ1 281 aa24.58■■□□□ 1.53
PACRGL-220ENST00000508952 ZC3H11AO75152 810 aaKnown RBP eCLIP24.57■■□□□ 1.52
PACRGL-220ENST00000508952 DGAT1O75907 488 aa24.57■■□□□ 1.52
PACRGL-220ENST00000508952 TECP42680 631 aa24.57■■□□□ 1.52
PACRGL-220ENST00000508952 BCAR1P56945 870 aa24.57■■□□□ 1.52
PACRGL-220ENST00000508952 KRT17Q04695 432 aa24.57■■□□□ 1.52
PACRGL-220ENST00000508952 MXD4Q14582 209 aaPredicted RBP24.57■■□□□ 1.52
PACRGL-220ENST00000508952 DUSP6Q16828 381 aa24.57■■□□□ 1.52
PACRGL-220ENST00000508952 TTC38Q5R3I4 469 aa24.57■■□□□ 1.52
PACRGL-220ENST00000508952 PDE12Q6L8Q7 609 aaKnown RBP24.57■■□□□ 1.52
PACRGL-220ENST00000508952 GLB1LQ6UWU2 654 aa24.57■■□□□ 1.52
PACRGL-220ENST00000508952 NOSTRINQ8IVI9 506 aa24.57■■□□□ 1.52
PACRGL-220ENST00000508952 VN1R2Q8NFZ6 395 aa24.57■■□□□ 1.52
PACRGL-220ENST00000508952 TBC1D13Q9NVG8 400 aa24.57■■□□□ 1.52
PACRGL-220ENST00000508952 HIDE1A8MVS5 230 aa24.56■■□□□ 1.52
PACRGL-220ENST00000508952 USO1O60763 962 aaKnown RBP24.56■■□□□ 1.52
PACRGL-220ENST00000508952 MED24O75448 989 aa24.56■■□□□ 1.52
PACRGL-220ENST00000508952 OR52Z1P0C646 297 aa24.56■■□□□ 1.52
PACRGL-220ENST00000508952 PTENP60484 403 aa24.56■■□□□ 1.52
PACRGL-220ENST00000508952 CAPSQ13938 189 aa24.56■■□□□ 1.52
PACRGL-220ENST00000508952 NBR1Q14596 966 aa24.56■■□□□ 1.52
PACRGL-220ENST00000508952 NOMO2Q5JPE7 1267 aa24.56■■□□□ 1.52
PACRGL-220ENST00000508952 UBXN11Q5T124 520 aa24.56■■□□□ 1.52
PACRGL-220ENST00000508952 CATSPER3Q86XQ3 398 aa24.56■■□□□ 1.52
PACRGL-220ENST00000508952 PRKAG3Q9UGI9 489 aa24.56■■□□□ 1.52
PACRGL-220ENST00000508952 OFD1O75665 1012 aa24.55■■□□□ 1.52
PACRGL-220ENST00000508952 ERLIN2O94905 339 aa24.55■■□□□ 1.52
PACRGL-220ENST00000508952 COL9A1P20849 921 aa24.55■■□□□ 1.52
PACRGL-220ENST00000508952 ARL2P36404 184 aa24.55■■□□□ 1.52
PACRGL-220ENST00000508952 ALDH7A1P49419 539 aaKnown RBP24.55■■□□□ 1.52
PACRGL-220ENST00000508952 TFDP1Q14186 410 aa24.55■■□□□ 1.52
PACRGL-220ENST00000508952 RABEP1Q15276 862 aa24.55■■□□□ 1.52
PACRGL-220ENST00000508952 AGMOQ6ZNB7 445 aa24.55■■□□□ 1.52
PACRGL-220ENST00000508952 ADHFE1Q8IWW8 467 aa24.55■■□□□ 1.52
PACRGL-220ENST00000508952 PGBD4Q96DM1 585 aa24.55■■□□□ 1.52
PACRGL-220ENST00000508952 GBP3Q9H0R5 595 aa24.55■■□□□ 1.52
PACRGL-220ENST00000508952 POLR3FQ9H1D9 316 aaPredicted RBP24.55■■□□□ 1.52
PACRGL-220ENST00000508952 TUFT1Q9NNX1 390 aa24.55■■□□□ 1.52
PACRGL-220ENST00000508952 INO80B-WBP1J3KQ70 363 aa24.54■■□□□ 1.52
PACRGL-220ENST00000508952 TSPAN1O60635 241 aa24.54■■□□□ 1.52
PACRGL-220ENST00000508952 EYA4O95677 639 aa24.54■■□□□ 1.52
PACRGL-220ENST00000508952 GLRA2P23416 452 aa24.54■■□□□ 1.52
PACRGL-220ENST00000508952 RNASELQ05823 741 aaKnown RBP24.54■■□□□ 1.52
PACRGL-220ENST00000508952 COASYQ13057 564 aa24.54■■□□□ 1.52
PACRGL-220ENST00000508952 ORC2Q13416 577 aaPredicted RBP24.54■■□□□ 1.52
PACRGL-220ENST00000508952 POTEGQ6S5H5 508 aa24.54■■□□□ 1.52
PACRGL-220ENST00000508952 MAEAQ7L5Y9 396 aa24.54■■□□□ 1.52
PACRGL-220ENST00000508952 TMC7Q7Z402 723 aa24.54■■□□□ 1.52
PACRGL-220ENST00000508952 MRPL10Q7Z7H8 261 aaKnown RBP24.54■■□□□ 1.52
PACRGL-220ENST00000508952 TMEM173Q86WV6 379 aaPredicted RBP24.54■■□□□ 1.52
PACRGL-220ENST00000508952 SMRP1Q8NCR6 262 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms