RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 IGSF22Q8N9C0 903 aa4.86□□□□□ -1.63
GYPB-209ENST00000508618 CPT1CQ8TCG5 803 aa4.86□□□□□ -1.63
GYPB-209ENST00000508618 ENKD1Q9H0I2 346 aa4.86□□□□□ -1.63
GYPB-209ENST00000508618 KCNH6Q9H252 994 aa4.86□□□□□ -1.63
GYPB-209ENST00000508618 SIRPGQ9P1W8 387 aa4.86□□□□□ -1.63
GYPB-209ENST00000508618 MAGEL2Q9UJ55 1249 aa4.86□□□□□ -1.63
GYPB-209ENST00000508618 SORCS3Q9UPU3 1222 aa4.86□□□□□ -1.63
GYPB-209ENST00000508618 CENPVL1A0A0U1RR11 272 aa4.85□□□□□ -1.63
GYPB-209ENST00000508618 CYP17A1P05093 508 aa4.85□□□□□ -1.63
GYPB-209ENST00000508618 TYRP1P17643 537 aa4.85□□□□□ -1.63
GYPB-209ENST00000508618 CLK3P49761 638 aaKnown RBP4.85□□□□□ -1.63
GYPB-209ENST00000508618 KIF11P52732 1056 aa4.85□□□□□ -1.63
GYPB-209ENST00000508618 WNT3AP56704 352 aa4.85□□□□□ -1.63
GYPB-209ENST00000508618 MAN2A1Q16706 1144 aa4.85□□□□□ -1.63
GYPB-209ENST00000508618 KANSL1Q7Z3B3 1105 aa4.85□□□□□ -1.63
GYPB-209ENST00000508618 BRAPQ7Z569 592 aa4.85□□□□□ -1.63
GYPB-209ENST00000508618 CYP4F11Q9HBI6 524 aa4.85□□□□□ -1.63
GYPB-209ENST00000508618 DNAI1Q9UI46 699 aa4.85□□□□□ -1.63
GYPB-209ENST00000508618 COL4A3Q01955 1670 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 KDM2BQ8NHM5 1336 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 A0A0A6YYJ9 748 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 GAGE12BA1L429 117 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 GAGE12HA6NDE8 117 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 TMEM200CA6NKL6 621 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 SCAF4O95104 1147 aaKnown RBP4.84□□□□□ -1.63
GYPB-209ENST00000508618 CDK4P11802 303 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 AVPR1BP47901 424 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 USP14P54578 494 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 MYBPC3Q14896 1274 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 PRAMEF9Q5VWM5 478 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 DOK3Q7L591 496 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 UNC5BQ8IZJ1 945 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 JMYQ8N9B5 988 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 CHST14Q8NCH0 376 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 GLB1L3Q8NCI6 653 aaPredicted RBP4.84□□□□□ -1.63
GYPB-209ENST00000508618 OR52N2Q8NGI0 321 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 COQ10AQ96MF6 247 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 TRIM39Q9HCM9 518 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 SYBUQ9NX95 663 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 SYNPO2Q9UMS6 1093 aa4.84□□□□□ -1.63
GYPB-209ENST00000508618 B4E1Z4 1266 aa4.83□□□□□ -1.64
GYPB-209ENST00000508618 DVL2O14641 736 aa4.83□□□□□ -1.64
GYPB-209ENST00000508618 KIAA0355O15063 1070 aa4.83□□□□□ -1.64
GYPB-209ENST00000508618 FSBPO95073 299 aa4.83□□□□□ -1.64
GYPB-209ENST00000508618 HNRNPLP14866 589 aaKnown RBP eCLIP4.83□□□□□ -1.641e-6■■■□□ 17.3
GYPB-209ENST00000508618 ZEB1P37275 1124 aaPredicted RBP4.83□□□□□ -1.64
GYPB-209ENST00000508618 RASA3Q14644 834 aa4.83□□□□□ -1.64
GYPB-209ENST00000508618 ARHGEF19Q8IW93 802 aa4.83□□□□□ -1.64
GYPB-209ENST00000508618 PPP1R14CQ8TAE6 165 aa4.83□□□□□ -1.64
GYPB-209ENST00000508618 NELL1Q92832 810 aa4.83□□□□□ -1.64
GYPB-209ENST00000508618 R3HDMLQ9H3Y0 253 aa4.83□□□□□ -1.64
GYPB-209ENST00000508618 PRDM13Q9H4Q3 707 aa4.83□□□□□ -1.64
GYPB-209ENST00000508618 PCIF1Q9H4Z3 704 aa4.83□□□□□ -1.64
GYPB-209ENST00000508618 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.83□□□□□ -1.64
GYPB-209ENST00000508618 KRTAP29-1A8MX34 341 aaPredicted RBP4.82□□□□□ -1.64
GYPB-209ENST00000508618 AHRRA9YTQ3 701 aa4.82□□□□□ -1.64
GYPB-209ENST00000508618 STC2O76061 302 aa4.82□□□□□ -1.64
GYPB-209ENST00000508618 ZNF37AP17032 561 aaPredicted RBP4.82□□□□□ -1.64
GYPB-209ENST00000508618 HK1P19367 917 aa4.82□□□□□ -1.64
GYPB-209ENST00000508618 BLOC1S1P78537 153 aa4.82□□□□□ -1.64
GYPB-209ENST00000508618 VPS72Q15906 364 aa4.82□□□□□ -1.64
GYPB-209ENST00000508618 RD3Q7Z3Z2 195 aa4.82□□□□□ -1.64
GYPB-209ENST00000508618 DDX53Q86TM3 631 aaKnown RBP4.82□□□□□ -1.64
GYPB-209ENST00000508618 GLCCI1Q86VQ1 547 aa4.82□□□□□ -1.64
GYPB-209ENST00000508618 ZSWIM2Q8NEG5 633 aa4.82□□□□□ -1.64
GYPB-209ENST00000508618 SUPT20HQ8NEM7 779 aa4.82□□□□□ -1.64
GYPB-209ENST00000508618 LINC00476Q8WZB0 136 aa4.82□□□□□ -1.64
GYPB-209ENST00000508618 FAM193BQ96PV7 902 aaPredicted RBP4.82□□□□□ -1.64
GYPB-209ENST00000508618 DCLRE1CQ96SD1 692 aaKnown RBP4.82□□□□□ -1.64
GYPB-209ENST00000508618 CPEB1Q9BZB8 566 aaKnown RBP4.82□□□□□ -1.64
GYPB-209ENST00000508618 SERHL2Q9H4I8 314 aa4.82□□□□□ -1.64
GYPB-209ENST00000508618 CHST2Q9Y4C5 530 aa4.82□□□□□ -1.64
GYPB-209ENST00000508618 HOXA3O43365 443 aaPredicted RBP4.81□□□□□ -1.64
GYPB-209ENST00000508618 OPHN1O60890 802 aa4.81□□□□□ -1.64
GYPB-209ENST00000508618 ADCY1Q08828 1119 aa4.81□□□□□ -1.64
GYPB-209ENST00000508618 SERINC3Q13530 473 aa4.81□□□□□ -1.64
GYPB-209ENST00000508618 ZCCHC8Q6NZY4 707 aaKnown RBP4.81□□□□□ -1.64
GYPB-209ENST00000508618 CCDC62Q6P9F0 684 aa4.81□□□□□ -1.64
GYPB-209ENST00000508618 FGD2Q7Z6J4 655 aa4.81□□□□□ -1.64
GYPB-209ENST00000508618 FAM83AQ86UY5 434 aa4.81□□□□□ -1.64
GYPB-209ENST00000508618 TUBGCP5Q96RT8 1024 aa4.81□□□□□ -1.64
GYPB-209ENST00000508618 NDC1Q9BTX1 674 aa4.81□□□□□ -1.64
GYPB-209ENST00000508618 MTG2Q9H4K7 406 aa4.81□□□□□ -1.64
GYPB-209ENST00000508618 ZNF768Q9H5H4 540 aaKnown RBP4.81□□□□□ -1.64
GYPB-209ENST00000508618 NCDNQ9UBB6 729 aa4.81□□□□□ -1.64
GYPB-209ENST00000508618 DKK2Q9UBU2 259 aa4.81□□□□□ -1.64
GYPB-209ENST00000508618 EIF2B4Q9UI10 523 aaKnown RBP4.81□□□□□ -1.64
GYPB-209ENST00000508618 INSL6Q9Y581 213 aa4.81□□□□□ -1.64
GYPB-209ENST00000508618 CCDC85CA6NKD9 419 aa4.8□□□□□ -1.64
GYPB-209ENST00000508618 DIRC3C9JPN6 131 aa4.8□□□□□ -1.64
GYPB-209ENST00000508618 H7C1D1 291 aa4.8□□□□□ -1.64
GYPB-209ENST00000508618 RNASET2O00584 256 aaKnown RBP4.8□□□□□ -1.64
GYPB-209ENST00000508618 DNAJC6O75061 913 aa4.8□□□□□ -1.64
GYPB-209ENST00000508618 GAAP10253 952 aa4.8□□□□□ -1.64
GYPB-209ENST00000508618 BMPR1AP36894 532 aa4.8□□□□□ -1.64
GYPB-209ENST00000508618 ADCY2Q08462 1091 aa4.8□□□□□ -1.64
GYPB-209ENST00000508618 FAM214AQ32MH5 1076 aa4.8□□□□□ -1.64
GYPB-209ENST00000508618 PRR16Q569H4 304 aa4.8□□□□□ -1.64
GYPB-209ENST00000508618 KIAA1841Q6NSI8 718 aa4.8□□□□□ -1.64
GYPB-209ENST00000508618 GDF7Q7Z4P5 450 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms