RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 DIS3LQ8TF46 1054 aaKnown RBP9.54□□□□□ -0.88
USP46-207ENST00000508499 STAMQ92783 540 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 VTI1AQ96AJ9 217 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 IFT74Q96LB3 600 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 PRIMPOLQ96LW4 560 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 INO80BQ9C086 356 aaPredicted RBP9.54□□□□□ -0.88
USP46-207ENST00000508499 POLR3FQ9H1D9 316 aaPredicted RBP9.54□□□□□ -0.88
USP46-207ENST00000508499 C2orf40Q9H1Z8 148 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 ADAMTS10Q9H324 1103 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 IFT122Q9HBG6 1241 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 SUCLA2Q9P2R7 463 aaPredicted RBP9.54□□□□□ -0.88
USP46-207ENST00000508499 TBX21Q9UL17 535 aa9.54□□□□□ -0.88
USP46-207ENST00000508499 RSPH10B2B2RC85 870 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 KIF20AO95235 890 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 RSPH10BP0C881 870 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 EN2P19622 333 aaPredicted RBP9.53□□□□□ -0.88
USP46-207ENST00000508499 CLCN3P51790 818 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 CRYBB1P53674 252 aaPredicted RBP9.53□□□□□ -0.88
USP46-207ENST00000508499 SNRPFP62306 86 aaKnown RBP9.53□□□□□ -0.88
USP46-207ENST00000508499 IGBP1P78318 339 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 MRPS6P82932 125 aaKnown RBP9.53□□□□□ -0.88
USP46-207ENST00000508499 ZNF200P98182 395 aaPredicted RBP9.53□□□□□ -0.88
USP46-207ENST00000508499 FAAP100Q0VG06 881 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 BFSP2Q13515 415 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 CAPSQ13938 189 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 DHX8Q14562 1220 aaKnown RBP9.53□□□□□ -0.88
USP46-207ENST00000508499 HERC4Q5GLZ8 1057 aaPredicted RBP9.53□□□□□ -0.88
USP46-207ENST00000508499 FAM47CQ5HY64 1035 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 FAM26FQ5R3K3 315 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 ODR4Q5SWX8 454 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 CAVIN1Q6NZI2 390 aaKnown RBP9.53□□□□□ -0.88
USP46-207ENST00000508499 TRAF7Q6Q0C0 670 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 RUFY4Q6ZNE9 571 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 TRMT1LQ7Z2T5 733 aaKnown RBP9.53□□□□□ -0.88
USP46-207ENST00000508499 FAM178BQ8IXR5 827 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 LRRC71Q8N4P6 559 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 METTL13Q8N6R0 699 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 TMEM161BQ8NDZ6 487 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 ZNF507Q8TCN5 953 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 ASAP3Q8TDY4 903 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 DHX38Q92620 1227 aaKnown RBP9.53□□□□□ -0.88
USP46-207ENST00000508499 TMEM143Q96AN5 459 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 ANP32EQ9BTT0 268 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 CCDC113Q9H0I3 377 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 BLZF1Q9H2G9 400 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 SUGCTQ9HAC7 445 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 GPRC5CQ9NQ84 441 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 TRMT13Q9NUP7 481 aaKnown RBP9.53□□□□□ -0.88
USP46-207ENST00000508499 EXOC1Q9NV70 894 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 PLA2G2EQ9NZK7 142 aa9.53□□□□□ -0.88
USP46-207ENST00000508499 CGNQ9P2M7 1197 aaKnown RBP9.53□□□□□ -0.88
USP46-207ENST00000508499 NPHP3-ACAD11A0A0J9YXS1 232 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 KIAA0355O15063 1070 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 CAVIN2O95810 425 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 PIGRP01833 764 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 CKBP12277 381 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 IDEP14735 1019 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 EIF4BP23588 611 aaKnown RBP9.52□□□□□ -0.89
USP46-207ENST00000508499 CASP1P29466 404 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 PHKA2P46019 1235 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 TLE2Q04725 743 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 CAMK4Q16566 473 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 NFIL3Q16649 462 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 LRRC26Q2I0M4 334 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 TMEM92Q6UXU6 159 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 HAUS6Q7Z4H7 955 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 SFR1Q86XK3 245 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 RHPN2Q8IUC4 686 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 MAP4K3Q8IVH8 894 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 GUF1Q8N442 669 aaKnown RBP9.52□□□□□ -0.89
USP46-207ENST00000508499 MYCT1Q8N699 235 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 MLKLQ8NB16 471 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 KIAA0895Q8NCT3 520 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 DNAJB3Q8WWF6 145 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 BSNDQ8WZ55 320 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 WNT8BQ93098 351 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 FUCA2Q9BTY2 467 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 NOC4LQ9BVI4 516 aaKnown RBP9.52□□□□□ -0.89
USP46-207ENST00000508499 CELF4Q9BZC1 486 aaKnown RBP9.52□□□□□ -0.89
USP46-207ENST00000508499 TRPV6Q9H1D0 765 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 FZD8Q9H461 694 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 MAN1B1Q9UKM7 699 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 NOD1Q9Y239 953 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 AKT3Q9Y243 479 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 RALGAPA2Q2PPJ7 1873 aa9.52□□□□□ -0.89
USP46-207ENST00000508499 ADGRA3Q8IWK6 1321 aa9.51□□□□□ -0.89
USP46-207ENST00000508499 M0QZ92 97 aa9.51□□□□□ -0.89
USP46-207ENST00000508499 CHRNA1P02708 482 aa9.51□□□□□ -0.89
USP46-207ENST00000508499 CLTBP09497 229 aa9.51□□□□□ -0.89
USP46-207ENST00000508499 DARSP14868 501 aaKnown RBP9.51□□□□□ -0.89
USP46-207ENST00000508499 SELPP16109 830 aa9.51□□□□□ -0.89
USP46-207ENST00000508499 BMP6P22004 513 aa9.51□□□□□ -0.89
USP46-207ENST00000508499 AXLP30530 894 aa9.51□□□□□ -0.89
USP46-207ENST00000508499 RFC2P35250 354 aa9.51□□□□□ -0.89
USP46-207ENST00000508499 PEX3P56589 373 aa9.51□□□□□ -0.89
USP46-207ENST00000508499 SOX10P56693 466 aa9.51□□□□□ -0.89
USP46-207ENST00000508499 NLRP11P59045 1033 aaKnown RBP9.51□□□□□ -0.89
USP46-207ENST00000508499 LSM11P83369 360 aaKnown RBP eCLIP9.51□□□□□ -0.89
USP46-207ENST00000508499 RAD51AP2Q09MP3 1159 aa9.51□□□□□ -0.89
USP46-207ENST00000508499 STK4Q13043 487 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms