RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 SHC4Q6S5L8 630 aa16.58■□□□□ 0.24
RNF4-210ENST00000508235 SV2BQ7L1I2 683 aa16.58■□□□□ 0.24
RNF4-210ENST00000508235 RTN4RL1Q86UN2 441 aaPredicted RBP16.58■□□□□ 0.24
RNF4-210ENST00000508235 LINC01599Q8WXQ3 324 aa16.58■□□□□ 0.24
RNF4-210ENST00000508235 YME1L1Q96TA2 773 aa16.58■□□□□ 0.24
RNF4-210ENST00000508235 LRRC27Q9C0I9 530 aa16.58■□□□□ 0.24
RNF4-210ENST00000508235 CUEDC2Q9H467 287 aa16.58■□□□□ 0.24
RNF4-210ENST00000508235 ELAC1Q9H777 363 aaKnown RBP16.58■□□□□ 0.24
RNF4-210ENST00000508235 SLC28A3Q9HAS3 691 aa16.58■□□□□ 0.24
RNF4-210ENST00000508235 AGPAT5Q9NUQ2 364 aa16.58■□□□□ 0.24
RNF4-210ENST00000508235 LARSQ9P2J5 1176 aaKnown RBP16.58■□□□□ 0.24
RNF4-210ENST00000508235 PIN4Q9Y237 131 aaKnown RBP16.58■□□□□ 0.24
RNF4-210ENST00000508235 PCDHB7Q9Y5E2 793 aa16.58■□□□□ 0.24
RNF4-210ENST00000508235 C9IYK1 514 aa16.57■□□□□ 0.24
RNF4-210ENST00000508235 MGEA5O60502 916 aa16.57■□□□□ 0.24
RNF4-210ENST00000508235 UPP2O95045 317 aa16.57■□□□□ 0.24
RNF4-210ENST00000508235 RAB27AP51159 221 aa16.57■□□□□ 0.24
RNF4-210ENST00000508235 MBTD1Q05BQ5 628 aa16.57■□□□□ 0.24
RNF4-210ENST00000508235 DHX8Q14562 1220 aaKnown RBP16.57■□□□□ 0.24
RNF4-210ENST00000508235 IQUBQ8NA54 791 aa16.57■□□□□ 0.24
RNF4-210ENST00000508235 CCDC51Q96ER9 411 aa16.57■□□□□ 0.24
RNF4-210ENST00000508235 PRIMPOLQ96LW4 560 aa16.57■□□□□ 0.24
RNF4-210ENST00000508235 TRAIPQ9BWF2 469 aa16.57■□□□□ 0.24
RNF4-210ENST00000508235 MINDY3Q9H8M7 445 aa16.57■□□□□ 0.24
RNF4-210ENST00000508235 PRMT7Q9NVM4 692 aaPredicted RBP16.57■□□□□ 0.24
RNF4-210ENST00000508235 RBM19Q9Y4C8 960 aaKnown RBP16.57■□□□□ 0.24
RNF4-210ENST00000508235 A0A0U1RQF3 1178 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 CCDC169A6NNP5 214 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 H0YCG3 227 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 TBCAO75347 108 aaKnown RBP16.56■□□□□ 0.24
RNF4-210ENST00000508235 PLS3P13797 630 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 SCP2P22307 547 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 PBX2P40425 430 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 SMTNP53814 917 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 PEX3P56589 373 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 HTRA4P83105 476 aaPredicted RBP16.56■□□□□ 0.24
RNF4-210ENST00000508235 MAPK7Q13164 816 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 MAPK6Q16659 721 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 FAM187BQ17R55 369 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 RESP18Q5W5W9 173 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 TWF2Q6IBS0 349 aaKnown RBP16.56■□□□□ 0.24
RNF4-210ENST00000508235 FAM117BQ6P1L5 589 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 NOTUMQ6P988 496 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 PPP4R3CPQ6ZMV5 832 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 TMCO2Q7Z6W1 182 aaPredicted RBP16.56■□□□□ 0.24
RNF4-210ENST00000508235 PDILTQ8N807 584 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 BSNDQ8WZ55 320 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 NTPCRQ9BSD7 190 aaKnown RBP16.56■□□□□ 0.24
RNF4-210ENST00000508235 PANK2Q9BZ23 570 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 NKX2-4Q9H2Z4 354 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 MAGEF1Q9HAY2 307 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 TMEM161AQ9NX61 479 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 CHMP5Q9NZZ3 219 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 COL4A6Q14031 1691 aa16.56■□□□□ 0.24
RNF4-210ENST00000508235 K7ERI5 159 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 HOXA2O43364 376 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 FAM13AO94988 1023 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 EOMESO95936 686 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 CMA1P23946 247 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 ABCD1P33897 745 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 NPTX2P47972 431 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 FAM189BP81408 668 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 AMPD3Q01432 767 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 RAD51AP2Q09MP3 1159 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 NAALADL2Q58DX5 795 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 ARSHQ5FYA8 562 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 PPP2R2DQ66LE6 453 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 DAW1Q8N136 415 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 LRRC15Q8TF66 581 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 SPIRE2Q8WWL2 714 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 RSPH1Q8WYR4 309 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 REEP2Q9BRK0 252 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 TNMDQ9H2S6 317 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 TMEM134Q9H6X4 195 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 KMT5AQ9NQR1 393 aa16.55■□□□□ 0.24
RNF4-210ENST00000508235 YBX2Q9Y2T7 364 aaKnown RBP16.55■□□□□ 0.24
RNF4-210ENST00000508235 A0A087X0B3 334 aa16.54■□□□□ 0.24
RNF4-210ENST00000508235 TSPAN1O60635 241 aa16.54■□□□□ 0.24
RNF4-210ENST00000508235 DGKIO75912 1065 aa16.54■□□□□ 0.24
RNF4-210ENST00000508235 CA3P07451 260 aa16.54■□□□□ 0.24
RNF4-210ENST00000508235 GIT2Q14161 759 aa16.54■□□□□ 0.24
RNF4-210ENST00000508235 CSPP1Q1MSJ5 1256 aa16.54■□□□□ 0.24
RNF4-210ENST00000508235 ECHDC2Q86YB7 292 aa16.54■□□□□ 0.24
RNF4-210ENST00000508235 CRIPAKQ8N1N5 446 aa16.54■□□□□ 0.24
RNF4-210ENST00000508235 SLC17A8Q8NDX2 589 aa16.54■□□□□ 0.24
RNF4-210ENST00000508235 CNNM3Q8NE01 707 aa16.54■□□□□ 0.24
RNF4-210ENST00000508235 SP7Q8TDD2 431 aaPredicted RBP16.54■□□□□ 0.24
RNF4-210ENST00000508235 DHX58Q96C10 678 aa16.54■□□□□ 0.24
RNF4-210ENST00000508235 FZD8Q9H461 694 aa16.54■□□□□ 0.24
RNF4-210ENST00000508235 ZNF576Q9H609 170 aa16.54■□□□□ 0.24
RNF4-210ENST00000508235 PARVGQ9HBI0 331 aa16.54■□□□□ 0.24
RNF4-210ENST00000508235 POLD4Q9HCU8 107 aa16.54■□□□□ 0.24
RNF4-210ENST00000508235 FAM105AQ9NUU6 356 aa16.54■□□□□ 0.24
RNF4-210ENST00000508235 KCNH3Q9ULD8 1083 aa16.54■□□□□ 0.24
RNF4-210ENST00000508235 ADGRA3Q8IWK6 1321 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 CNTNAP2Q9UHC6 1331 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 NPHP3-ACAD11A0A0J9YXS1 232 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 A0A1W2PQ27 194 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 A0A1W2PQ64 194 aa16.53■□□□□ 0.24
RNF4-210ENST00000508235 A0A1W2PQD8 194 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms