RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 STAT5BP51692 787 aa5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 SLC16A1P53985 500 aa5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 SESN2P58004 480 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 MGAT5Q09328 741 aa5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 MALLQ13021 153 aa5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 GFOD2Q3B7J2 385 aa5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 MINDY4Q4G0A6 757 aa5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 RRP12Q5JTH9 1297 aaKnown RBP5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 Q6ZUG5 572 aa5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 RTKN2Q8IZC4 609 aa5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 THEMISQ8N1K5 641 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 BHLHE22Q8NFJ8 381 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 PPP1R14CQ8TAE6 165 aa5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 GFM2Q969S9 779 aaKnown RBP5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 DACT3Q96B18 629 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 CLIP3Q96DZ5 547 aa5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 YTHDC1Q96MU7 727 aaKnown RBP5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 AIFM3Q96NN9 605 aa5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 SPATA25Q9BR10 227 aa5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 FDXACB1Q9BRP7 624 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 TMEM168Q9H0V1 697 aa5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 GREM2Q9H772 168 aa5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 CD320Q9NPF0 282 aa5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 SAP30BPQ9UHR5 308 aaKnown RBP5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 VWA7Q9Y334 891 aa5.3□□□□□ -1.56
HMGB1P28-201ENST00000507778 SH3D21A4FU49 640 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 DAPK3O43293 454 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 TSPAN15O95858 294 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 GSPT1P15170 499 aaKnown RBP5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 MEOX1P50221 254 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 AFF3P51826 1226 aaKnown RBP5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 LINC00310P59036 64 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 CD69Q07108 199 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 ZNF648Q5T619 568 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 TRIM68Q6AZZ1 485 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 KLHDC10Q6PID8 442 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 FAM180AQ6UWF9 173 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 REXO1L1PQ8IX06 675 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 GLB1L3Q8NCI6 653 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 NKD2Q969F2 451 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 COA7Q96BR5 231 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 AJUBAQ96IF1 538 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 LRGUKQ96M69 825 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 FMNL2Q96PY5 1086 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 ADI1Q9BV57 179 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 CARD11Q9BXL7 1154 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 KATNBL1Q9H079 304 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 BARX1Q9HBU1 254 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 DNM3Q9UQ16 869 aa5.29□□□□□ -1.56
HMGB1P28-201ENST00000507778 A0A1W2PR48 441 aa5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 FFAR3O14843 346 aa5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 PRC1O43663 620 aa5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 LY86O95711 162 aa5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 POU2F2P09086 479 aa5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 HNRNPLP14866 589 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 HSPA6P17066 643 aa5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 LPOP22079 712 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 MCAMP43121 646 aa5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 RAP1GAPP47736 663 aa5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 KCNA10Q16322 511 aa5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 UAP1L1Q3KQV9 507 aa5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 IFIT1BQ5T764 474 aaKnown RBP5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 MCTP2Q6DN12 878 aa5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 OGFOD2Q6N063 350 aa5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 EPM2AIP1Q7L775 607 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 TMEM151BQ8IW70 566 aa5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 CARFQ8N187 725 aa5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 TXNDC5Q8NBS9 432 aaKnown RBP5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 NRG4Q8WWG1 115 aa5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 PCGF6Q9BYE7 350 aa5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 RBM12Q9NTZ6 932 aaKnown RBP5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 SCOCQ9UIL1 159 aa5.28□□□□□ -1.56
HMGB1P28-201ENST00000507778 A0A1B0GTL3 188 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 NPIPB6E9PJ23 425 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 AP1G1O43747 822 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 OFD1O75665 1012 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 LTA4HP09960 611 aaKnown RBP5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 GAAP10253 952 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 WASP42768 502 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 MEF2AQ02078 507 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 PCOLCEQ15113 449 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 PKN1Q16512 942 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 FAM26FQ5R3K3 315 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 LARP4Q71RC2 724 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 UNC5BQ8IZJ1 945 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 ADGRG2Q8IZP9 1017 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 KLHL36Q8N4N3 616 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 POU5F2Q8N7G0 328 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 GPR156Q8NFN8 814 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 ADAMTS17Q8TE56 1095 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 RIN2Q8WYP3 895 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 UIMC1Q96RL1 719 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 NMRK2Q9NPI5 230 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 ANLNQ9NQW6 1124 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 SERPINB13Q9UIV8 391 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 RCAN3Q9UKA8 241 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 ADAM29Q9UKF5 820 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 INTUQ9ULD6 942 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 ZDHHC9Q9Y397 364 aa5.27□□□□□ -1.57
HMGB1P28-201ENST00000507778 RPTORQ8N122 1335 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms