RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 FZD5Q13467 585 aa8.28□□□□□ -1.08
VCAN-207ENST00000507162 LONRF3Q496Y0 759 aa8.28□□□□□ -1.08
VCAN-207ENST00000507162 ASPRV1Q53RT3 343 aa8.28□□□□□ -1.08
VCAN-207ENST00000507162 VPS53Q5VIR6 699 aa8.28□□□□□ -1.08
VCAN-207ENST00000507162 RNF43Q68DV7 783 aa8.28□□□□□ -1.08
VCAN-207ENST00000507162 FAM160A2Q8N612 972 aaPredicted RBP8.28□□□□□ -1.08
VCAN-207ENST00000507162 ZNF707Q96C28 371 aaPredicted RBP8.28□□□□□ -1.08
VCAN-207ENST00000507162 PCYT2Q99447 389 aa8.28□□□□□ -1.08
VCAN-207ENST00000507162 MRPL9Q9BYD2 267 aaKnown RBP8.28□□□□□ -1.08
VCAN-207ENST00000507162 SMOC1Q9H4F8 434 aa8.28□□□□□ -1.08
VCAN-207ENST00000507162 DPP7Q9UHL4 492 aa8.28□□□□□ -1.08
VCAN-207ENST00000507162 USP9XQ93008 2570 aaPredicted RBP8.28□□□□□ -1.08
VCAN-207ENST00000507162 HECTD1Q9ULT8 2610 aa8.28□□□□□ -1.08
VCAN-207ENST00000507162 C2orf16Q68DN1 1984 aa8.28□□□□□ -1.08
VCAN-207ENST00000507162 DENND4AQ7Z401 1863 aa8.28□□□□□ -1.08
VCAN-207ENST00000507162 DOCK5Q9H7D0 1870 aa8.28□□□□□ -1.08
VCAN-207ENST00000507162 COL4A3Q01955 1670 aa8.27□□□□□ -1.08
VCAN-207ENST00000507162 ZBTB5O15062 677 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 FOXP2O15409 715 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 GAS2O43903 313 aaKnown RBP8.27□□□□□ -1.09
VCAN-207ENST00000507162 GLUD1P00367 558 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 VTNP04004 478 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 GALTP07902 379 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 ZNF806P0C7X5 589 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 CXCL12P48061 93 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 STAT5BP51692 787 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 CRYBB1P53674 252 aaPredicted RBP8.27□□□□□ -1.09
VCAN-207ENST00000507162 HAND2P61296 217 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 ZMYM1Q5SVZ6 1142 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 KIAA1211LQ6NV74 962 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 MFSD6Q6ZSS7 791 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 PALB2Q86YC2 1186 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 HOMER1Q86YM7 354 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 LURAP1LQ8IV03 231 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 ADAM32Q8TC27 787 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 KXD1Q9BQD3 176 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 VN1R3Q9BXE9 311 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 NT5C3AQ9H0P0 336 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 NRDE2Q9H7Z3 1164 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 LMAN1LQ9HAT1 526 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 HEBP1Q9NRV9 189 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 WASF3Q9UPY6 502 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 INPP5FQ9Y2H2 1132 aa8.27□□□□□ -1.09
VCAN-207ENST00000507162 ZNF462Q96JM2 2506 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 TEX28O15482 410 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 LILRB3O75022 631 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 ADH1AP07327 375 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 KCNA2P16389 499 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 CNR2P34972 360 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 SLC11A1P49279 550 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 CCR3P51677 355 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 SATB1Q01826 763 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 COL28A1Q2UY09 1125 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 SH3PXD2AQ5TCZ1 1133 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 MTSS1LQ765P7 747 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 DGKHQ86XP1 1220 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 SIRT2Q8IXJ6 389 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 STAG2Q8N3U4 1231 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 METTL13Q8N6R0 699 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 SMARCC2Q8TAQ2 1214 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 GPATCH3Q96I76 525 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 ZNF668Q96K58 619 aaPredicted RBP8.26□□□□□ -1.09
VCAN-207ENST00000507162 BBC3Q96PG8 261 aaPredicted RBP8.26□□□□□ -1.09
VCAN-207ENST00000507162 PHF20Q9BVI0 1012 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 LRRCC1Q9C099 1032 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 ADAMTS10Q9H324 1103 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 DNAJB4Q9UDY4 337 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 CDH7Q9ULB5 785 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 ZFP37Q9Y6Q3 630 aaPredicted RBP8.26□□□□□ -1.09
VCAN-207ENST00000507162 SPTA1P02549 2419 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 LAMA5O15230 3695 aa8.26□□□□□ -1.09
VCAN-207ENST00000507162 FREM2Q5SZK8 3169 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 A0A0U1RQF3 1178 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 C4orf47A7E2U8 309 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 KLRF2D3W0D1 207 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 GPR32O75388 356 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 FGAP02671 866 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 URODP06132 367 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 FGFR4P22455 802 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 NTHL1P78549 312 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 PCNX4Q63HM2 1172 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 TAS1R1Q7RTX1 841 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 TRMT1LQ7Z2T5 733 aaKnown RBP8.25□□□□□ -1.09
VCAN-207ENST00000507162 GRASPQ7Z6J2 395 aaPredicted RBP8.25□□□□□ -1.09
VCAN-207ENST00000507162 ZNF598Q86UK7 904 aaKnown RBP8.25□□□□□ -1.09
VCAN-207ENST00000507162 GLYCTKQ8IVS8 523 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 MIER1Q8N108 512 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 LPPQ93052 612 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 RHOBTB2Q9BYZ6 727 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 PRKD2Q9BZL6 878 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 CHRDQ9H2X0 955 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 DACH1Q9UI36 760 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 GPSM3Q9Y4H4 160 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 DOCK6Q96HP0 2047 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 ACACAQ13085 2346 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 ADAMTS20P59510 1910 aa8.25□□□□□ -1.09
VCAN-207ENST00000507162 BAZ2BQ9UIF8 2168 aaKnown RBP8.24□□□□□ -1.09
VCAN-207ENST00000507162 CARNS1A5YM72 827 aa8.24□□□□□ -1.09
VCAN-207ENST00000507162 HYAL3O43820 417 aaPredicted RBP8.24□□□□□ -1.09
VCAN-207ENST00000507162 ALDH2P05091 517 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms