RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 ERVK-21P61565 698 aa21.39■■□□□ 1.01
LMNA-221ENST00000506981 PKP1Q13835 747 aa21.39■■□□□ 1.01
LMNA-221ENST00000506981 KARSQ15046 597 aaKnown RBP21.39■■□□□ 1.01
LMNA-221ENST00000506981 FOXD4L6Q3SYB3 417 aaPredicted RBP21.39■■□□□ 1.01
LMNA-221ENST00000506981 ATL3Q6DD88 541 aa21.39■■□□□ 1.01
LMNA-221ENST00000506981 FOXD4L3Q6VB84 417 aaPredicted RBP21.39■■□□□ 1.01
LMNA-221ENST00000506981 ABI1Q8IZP0 508 aa21.39■■□□□ 1.01
LMNA-221ENST00000506981 SYT2Q8N9I0 419 aaPredicted RBP21.39■■□□□ 1.01
LMNA-221ENST00000506981 RNF169Q8NCN4 708 aa21.39■■□□□ 1.01
LMNA-221ENST00000506981 DEPTORQ8TB45 409 aa21.39■■□□□ 1.01
LMNA-221ENST00000506981 ZNF689Q96CS4 500 aaPredicted RBP21.39■■□□□ 1.01
LMNA-221ENST00000506981 DRC1Q96MC2 740 aa21.39■■□□□ 1.01
LMNA-221ENST00000506981 CCSER1Q9C0I3 900 aa21.39■■□□□ 1.01
LMNA-221ENST00000506981 TFIP11Q9UBB9 837 aaKnown RBP21.39■■□□□ 1.01
LMNA-221ENST00000506981 RWDD3Q9Y3V2 267 aa21.39■■□□□ 1.01
LMNA-221ENST00000506981 TDRD15B5MCY1 1934 aaKnown RBP21.38■■□□□ 1.01
LMNA-221ENST00000506981 SPTLC2O15270 562 aa21.38■■□□□ 1.01
LMNA-221ENST00000506981 PLA2G4BP0C869 781 aa21.38■■□□□ 1.01
LMNA-221ENST00000506981 PLCG1P19174 1290 aa21.38■■□□□ 1.01
LMNA-221ENST00000506981 AXLP30530 894 aa21.38■■□□□ 1.01
LMNA-221ENST00000506981 FAM189BP81408 668 aa21.38■■□□□ 1.01
LMNA-221ENST00000506981 MBTD1Q05BQ5 628 aa21.38■■□□□ 1.01
LMNA-221ENST00000506981 PAN2Q504Q3 1202 aaKnown RBP21.38■■□□□ 1.01
LMNA-221ENST00000506981 RINT1Q6NUQ1 792 aa21.38■■□□□ 1.01
LMNA-221ENST00000506981 ECHDC2Q86YB7 292 aa21.38■■□□□ 1.01
LMNA-221ENST00000506981 LINC00301Q8NCQ3 95 aa21.38■■□□□ 1.01
LMNA-221ENST00000506981 FBXO22Q8NEZ5 403 aa21.38■■□□□ 1.01
LMNA-221ENST00000506981 RUSC1Q9BVN2 902 aa21.38■■□□□ 1.01
LMNA-221ENST00000506981 RC3H2Q9HBD1 1191 aaKnown RBP21.38■■□□□ 1.01
LMNA-221ENST00000506981 KCND2Q9NZV8 630 aa21.38■■□□□ 1.01
LMNA-221ENST00000506981 DAXXQ9UER7 740 aaPredicted RBP21.38■■□□□ 1.01
LMNA-221ENST00000506981 CFAP45Q9UL16 551 aa21.38■■□□□ 1.01
LMNA-221ENST00000506981 A0A0U1RQF3 1178 aa21.37■■□□□ 1.01
LMNA-221ENST00000506981 HIP1RO75146 1068 aa21.37■■□□□ 1.01
LMNA-221ENST00000506981 IGFBP4P22692 258 aa21.37■■□□□ 1.01
LMNA-221ENST00000506981 SPECC1Q5M775 1068 aa21.37■■□□□ 1.01
LMNA-221ENST00000506981 NOTUMQ6P988 496 aa21.37■■□□□ 1.01
LMNA-221ENST00000506981 CRIPAKQ8N1N5 446 aa21.37■■□□□ 1.01
LMNA-221ENST00000506981 SYMPKQ92797 1274 aaKnown RBP21.37■■□□□ 1.01
LMNA-221ENST00000506981 EPSTI1Q96J88 318 aa21.37■■□□□ 1.01
LMNA-221ENST00000506981 CLIC6Q96NY7 704 aa21.37■■□□□ 1.01
LMNA-221ENST00000506981 C17orf80Q9BSJ5 609 aa21.37■■□□□ 1.01
LMNA-221ENST00000506981 FAM105AQ9NUU6 356 aa21.37■■□□□ 1.01
LMNA-221ENST00000506981 PRMT7Q9NVM4 692 aaPredicted RBP21.37■■□□□ 1.01
LMNA-221ENST00000506981 TBKBP1A7MCY6 615 aa21.36■■□□□ 1.01
LMNA-221ENST00000506981 GTPBP6O43824 516 aaPredicted RBP21.36■■□□□ 1.01
LMNA-221ENST00000506981 TSPAN1O60635 241 aa21.36■■□□□ 1.01
LMNA-221ENST00000506981 PPP6R2O75170 966 aa21.36■■□□□ 1.01
LMNA-221ENST00000506981 EOMESO95936 686 aa21.36■■□□□ 1.01
LMNA-221ENST00000506981 CTNNB1P35222 781 aa21.36■■□□□ 1.01
LMNA-221ENST00000506981 DMP1Q13316 513 aaPredicted RBP21.36■■□□□ 1.01
LMNA-221ENST00000506981 TMEM132AQ24JP5 1023 aa21.36■■□□□ 1.01
LMNA-221ENST00000506981 CDCA2Q69YH5 1023 aaPredicted RBP21.36■■□□□ 1.01
LMNA-221ENST00000506981 C1orf186Q6ZWK4 172 aa21.36■■□□□ 1.01
LMNA-221ENST00000506981 BSNDQ8WZ55 320 aa21.36■■□□□ 1.01
LMNA-221ENST00000506981 CCDC51Q96ER9 411 aa21.36■■□□□ 1.01
LMNA-221ENST00000506981 TRAIPQ9BWF2 469 aa21.36■■□□□ 1.01
LMNA-221ENST00000506981 BRD1O95696 1058 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 KRT18P05783 430 aaKnown RBP21.35■■□□□ 1.01
LMNA-221ENST00000506981 FGFR1P11362 822 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 GUCY2CP25092 1073 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 GATMP50440 423 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 SLC12A3P55017 1021 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 DHX8Q14562 1220 aaKnown RBP21.35■■□□□ 1.01
LMNA-221ENST00000506981 MAPK6Q16659 721 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 SPOUT1Q5T280 376 aaKnown RBP21.35■■□□□ 1.01
LMNA-221ENST00000506981 SPRED2Q7Z698 418 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 GPBP1Q86WP2 473 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 TMEM192Q8IY95 271 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 KCNG4Q8TDN1 519 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 LARP4BQ92615 738 aaKnown RBP21.35■■□□□ 1.01
LMNA-221ENST00000506981 RAD54LQ92698 747 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 PGBD4Q96DM1 585 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 PRIMPOLQ96LW4 560 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 TMEM117Q9H0C3 514 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 C17orf75Q9HAS0 396 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 POLD4Q9HCU8 107 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 STK17AQ9UEE5 414 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 ATP6V1DQ9Y5K8 247 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 CHD9Q3L8U1 2897 aa21.35■■□□□ 1.01
LMNA-221ENST00000506981 CCDC169A6NNP5 214 aa21.34■■□□□ 1.01
LMNA-221ENST00000506981 LIG1P18858 919 aa21.34■■□□□ 1.01
LMNA-221ENST00000506981 EFNA5P52803 228 aa21.34■■□□□ 1.01
LMNA-221ENST00000506981 PEX3P56589 373 aa21.34■■□□□ 1.01
LMNA-221ENST00000506981 RAD51AP2Q09MP3 1159 aa21.34■■□□□ 1.01
LMNA-221ENST00000506981 EPC2Q52LR7 807 aa21.34■■□□□ 1.01
LMNA-221ENST00000506981 RRAGBQ5VZM2 374 aa21.34■■□□□ 1.01
LMNA-221ENST00000506981 PPP4R3CPQ6ZMV5 832 aa21.34■■□□□ 1.01
LMNA-221ENST00000506981 USP49Q70CQ1 688 aa21.34■■□□□ 1.01
LMNA-221ENST00000506981 GDPD5Q8WTR4 605 aa21.34■■□□□ 1.01
LMNA-221ENST00000506981 CPB2Q96IY4 423 aa21.34■■□□□ 1.01
LMNA-221ENST00000506981 TRIM6Q9C030 488 aaPredicted RBP21.34■■□□□ 1.01
LMNA-221ENST00000506981 KCNG1Q9UIX4 513 aa21.34■■□□□ 1.01
LMNA-221ENST00000506981 PCDHB2Q9Y5E7 798 aa21.34■■□□□ 1.01
LMNA-221ENST00000506981 PLXNA4Q9HCM2 1894 aa21.34■■□□□ 1.01
LMNA-221ENST00000506981 PHLPP2Q6ZVD8 1323 aa21.33■■□□□ 1.01
LMNA-221ENST00000506981 EPOPA6NHQ4 379 aa21.33■■□□□ 1.01
LMNA-221ENST00000506981 RFXAPO00287 272 aa21.33■■□□□ 1.01
LMNA-221ENST00000506981 CUTAO60888 179 aa21.33■■□□□ 1.01
LMNA-221ENST00000506981 PRKCBP05771 671 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms