RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 HCFC2Q9Y5Z7 792 aa16.32■□□□□ 0.2
SEC24D-208ENST00000506622 SLC37A4O43826 429 aa16.31■□□□□ 0.2
SEC24D-208ENST00000506622 MARCH6O60337 910 aa16.31■□□□□ 0.2
SEC24D-208ENST00000506622 CLASP2O75122 1294 aaKnown RBP16.31■□□□□ 0.2
SEC24D-208ENST00000506622 ITIH3Q06033 890 aa16.31■□□□□ 0.2
SEC24D-208ENST00000506622 PPP2R5CQ13362 524 aa16.31■□□□□ 0.2
SEC24D-208ENST00000506622 PTPN21Q16825 1174 aa16.31■□□□□ 0.2
SEC24D-208ENST00000506622 NOMO2Q5JPE7 1267 aa16.31■□□□□ 0.2
SEC24D-208ENST00000506622 PLA2G4FQ68DD2 849 aa16.31■□□□□ 0.2
SEC24D-208ENST00000506622 VPS52Q8N1B4 723 aa16.31■□□□□ 0.2
SEC24D-208ENST00000506622 FBXL6Q8N531 539 aa16.31■□□□□ 0.2
SEC24D-208ENST00000506622 LPPQ93052 612 aa16.31■□□□□ 0.2
SEC24D-208ENST00000506622 PGBD4Q96DM1 585 aa16.31■□□□□ 0.2
SEC24D-208ENST00000506622 NECTIN4Q96NY8 510 aa16.31■□□□□ 0.2
SEC24D-208ENST00000506622 PRRX2Q99811 253 aa16.31■□□□□ 0.2
SEC24D-208ENST00000506622 TSHZ2Q9NRE2 1034 aa16.31■□□□□ 0.2
SEC24D-208ENST00000506622 FAM105AQ9NUU6 356 aa16.31■□□□□ 0.2
SEC24D-208ENST00000506622 INPP5FQ9Y2H2 1132 aa16.31■□□□□ 0.2
SEC24D-208ENST00000506622 EML1O00423 815 aa16.3■□□□□ 0.2
SEC24D-208ENST00000506622 ZNF623O75123 536 aa16.3■□□□□ 0.2
SEC24D-208ENST00000506622 P4HBP07237 508 aaKnown RBP16.3■□□□□ 0.2
SEC24D-208ENST00000506622 GCFC2P16383 781 aaKnown RBP16.3■□□□□ 0.2
SEC24D-208ENST00000506622 SP100P23497 879 aaPredicted RBP16.3■□□□□ 0.2
SEC24D-208ENST00000506622 POLGP54098 1239 aaPredicted RBP16.3■□□□□ 0.2
SEC24D-208ENST00000506622 GIT2Q14161 759 aa16.3■□□□□ 0.2
SEC24D-208ENST00000506622 PPP4R3AQ6IN85 833 aa16.3■□□□□ 0.2
SEC24D-208ENST00000506622 NEK8Q86SG6 692 aa16.3■□□□□ 0.2
SEC24D-208ENST00000506622 CEP170P1Q96L14 293 aa16.3■□□□□ 0.2
SEC24D-208ENST00000506622 NAP1L4Q99733 375 aaKnown RBP16.3■□□□□ 0.2
SEC24D-208ENST00000506622 PHF20Q9BVI0 1012 aa16.3■□□□□ 0.2
SEC24D-208ENST00000506622 ADAM7Q9H2U9 754 aa16.3■□□□□ 0.2
SEC24D-208ENST00000506622 TBC1D13Q9NVG8 400 aa16.3■□□□□ 0.2
SEC24D-208ENST00000506622 PPME1Q9Y570 386 aa16.3■□□□□ 0.2
SEC24D-208ENST00000506622 COL4A3BPQ9Y5P4 624 aa16.3■□□□□ 0.2
SEC24D-208ENST00000506622 MYO15AQ9UKN7 3530 aa16.3■□□□□ 0.2
SEC24D-208ENST00000506622 ZFHX2Q9C0A1 2572 aaPredicted RBP16.3■□□□□ 0.2
SEC24D-208ENST00000506622 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.29■□□□□ 0.2
SEC24D-208ENST00000506622 CCNT1O60563 726 aaKnown RBP16.29■□□□□ 0.2
SEC24D-208ENST00000506622 GALTP07902 379 aa16.29■□□□□ 0.2
SEC24D-208ENST00000506622 SRGAP2CP0DJJ0 459 aa16.29■□□□□ 0.2
SEC24D-208ENST00000506622 PTPN5P54829 565 aa16.29■□□□□ 0.2
SEC24D-208ENST00000506622 NPEPPSP55786 919 aa16.29■□□□□ 0.2
SEC24D-208ENST00000506622 DDX53Q86TM3 631 aaKnown RBP16.29■□□□□ 0.2
SEC24D-208ENST00000506622 PRPF31Q8WWY3 499 aaKnown RBP16.29■□□□□ 0.2
SEC24D-208ENST00000506622 PSPC1Q8WXF1 523 aaKnown RBP16.29■□□□□ 0.2
SEC24D-208ENST00000506622 IGSF21Q96ID5 467 aa16.29■□□□□ 0.2
SEC24D-208ENST00000506622 RIPOR3Q96MK2 946 aa16.29■□□□□ 0.2
SEC24D-208ENST00000506622 GBP3Q9H0R5 595 aa16.29■□□□□ 0.2
SEC24D-208ENST00000506622 ZBP1Q9H171 429 aa16.29■□□□□ 0.2
SEC24D-208ENST00000506622 NRDE2Q9H7Z3 1164 aa16.29■□□□□ 0.2
SEC24D-208ENST00000506622 IFT122Q9HBG6 1241 aa16.29■□□□□ 0.2
SEC24D-208ENST00000506622 KCNMB3Q9NPA1 279 aa16.29■□□□□ 0.2
SEC24D-208ENST00000506622 VAV3Q9UKW4 847 aa16.29■□□□□ 0.2
SEC24D-208ENST00000506622 IRAK3Q9Y616 596 aa16.29■□□□□ 0.2
SEC24D-208ENST00000506622 DMDP11532 3685 aa16.29■□□□□ 0.2
SEC24D-208ENST00000506622 TBX3O15119 743 aa16.28■□□□□ 0.2
SEC24D-208ENST00000506622 OFD1O75665 1012 aa16.28■□□□□ 0.2
SEC24D-208ENST00000506622 CTSAP10619 480 aa16.28■□□□□ 0.2
SEC24D-208ENST00000506622 RFC5P40937 340 aa16.28■□□□□ 0.2
SEC24D-208ENST00000506622 MTHFRP42898 656 aa16.28■□□□□ 0.2
SEC24D-208ENST00000506622 SCRN1Q12765 414 aa16.28■□□□□ 0.2
SEC24D-208ENST00000506622 IER5LQ5T953 404 aa16.28■□□□□ 0.2
SEC24D-208ENST00000506622 OTUD6AQ7L8S5 288 aa16.28■□□□□ 0.2
SEC24D-208ENST00000506622 SRGAP1Q7Z6B7 1085 aa16.28■□□□□ 0.2
SEC24D-208ENST00000506622 TMEM173Q86WV6 379 aaPredicted RBP16.28■□□□□ 0.2
SEC24D-208ENST00000506622 URGCPQ8TCY9 931 aa16.28■□□□□ 0.2
SEC24D-208ENST00000506622 AUTS2Q8WXX7 1259 aa16.28■□□□□ 0.2
SEC24D-208ENST00000506622 AGPAT5Q9NUQ2 364 aa16.28■□□□□ 0.2
SEC24D-208ENST00000506622 DZANK1Q9NVP4 752 aa16.28■□□□□ 0.2
SEC24D-208ENST00000506622 PCDHB2Q9Y5E7 798 aa16.28■□□□□ 0.2
SEC24D-208ENST00000506622 WDR87Q6ZQQ6 2873 aa16.28■□□□□ 0.2
SEC24D-208ENST00000506622 MEIS3P2A8K0S8 358 aa16.27■□□□□ 0.2
SEC24D-208ENST00000506622 ASAP2O43150 1006 aa16.27■□□□□ 0.2
SEC24D-208ENST00000506622 BAG4O95429 457 aaKnown RBP16.27■□□□□ 0.2
SEC24D-208ENST00000506622 LAMTOR4Q0VGL1 99 aa16.27■□□□□ 0.2
SEC24D-208ENST00000506622 EPHA7Q15375 998 aa16.27■□□□□ 0.2
SEC24D-208ENST00000506622 ATAT1Q5SQI0 421 aa16.27■□□□□ 0.2
SEC24D-208ENST00000506622 RARS2Q5T160 578 aaKnown RBP16.27■□□□□ 0.2
SEC24D-208ENST00000506622 PIK3AP1Q6ZUJ8 805 aa16.27■□□□□ 0.2
SEC24D-208ENST00000506622 ZNF579Q8NAF0 562 aaKnown RBP16.27■□□□□ 0.2
SEC24D-208ENST00000506622 PRSS33Q8NF86 280 aa16.27■□□□□ 0.2
SEC24D-208ENST00000506622 TCP11Q8WWU5 503 aa16.27■□□□□ 0.2
SEC24D-208ENST00000506622 TMEM143Q96AN5 459 aa16.27■□□□□ 0.2
SEC24D-208ENST00000506622 ASIC4Q96FT7 647 aa16.27■□□□□ 0.2
SEC24D-208ENST00000506622 FAM193BQ96PV7 902 aaPredicted RBP16.27■□□□□ 0.2
SEC24D-208ENST00000506622 LXNQ9BS40 222 aa16.27■□□□□ 0.2
SEC24D-208ENST00000506622 POMKQ9H5K3 350 aa16.27■□□□□ 0.2
SEC24D-208ENST00000506622 DHX33Q9H6R0 707 aaKnown RBP16.27■□□□□ 0.2
SEC24D-208ENST00000506622 KANSL3Q9P2N6 904 aa16.27■□□□□ 0.2
SEC24D-208ENST00000506622 DNAJB4Q9UDY4 337 aa16.27■□□□□ 0.2
SEC24D-208ENST00000506622 STK39Q9UEW8 545 aa16.27■□□□□ 0.2
SEC24D-208ENST00000506622 CDH22Q9UJ99 828 aa16.27■□□□□ 0.2
SEC24D-208ENST00000506622 STK36Q9NRP7 1315 aa16.27■□□□□ 0.19
SEC24D-208ENST00000506622 GAS2O43903 313 aaKnown RBP16.26■□□□□ 0.19
SEC24D-208ENST00000506622 ALDH2P05091 517 aa16.26■□□□□ 0.19
SEC24D-208ENST00000506622 YWHABP31946 246 aaKnown RBP16.26■□□□□ 0.19
SEC24D-208ENST00000506622 SLC11A1P49279 550 aa16.26■□□□□ 0.19
SEC24D-208ENST00000506622 NCAPH2Q6IBW4 605 aa16.26■□□□□ 0.19
SEC24D-208ENST00000506622 MRPL10Q7Z7H8 261 aaKnown RBP16.26■□□□□ 0.19
SEC24D-208ENST00000506622 PPFIBP1Q86W92 1011 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms