RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 GJC2Q5T442 439 aaPredicted RBP13.3□□□□□ -0.28
LIN54-206ENST00000506560 PHLDB3Q6NSJ2 640 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 OTUD6AQ7L8S5 288 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 SLC9A9Q8IVB4 645 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 OLIG1Q8TAK6 271 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 ASAP3Q8TDY4 903 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 UBXN4Q92575 508 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 KAT5Q92993 513 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 CAPZA3Q96KX2 299 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 PSMB7Q99436 277 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 GPR88Q9GZN0 384 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 FBXO40Q9UH90 709 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 LRRC37A2A6NM11 1700 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 NCK2O43639 380 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 ATG7O95352 703 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 EDN1P05305 212 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 MYL7Q01449 175 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 RSRC2Q7L4I2 434 aaKnown RBP13.3□□□□□ -0.28
LIN54-206ENST00000506560 ARMC9Q7Z3E5 817 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 LMO3Q8TAP4 145 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 CCDC127Q96BQ5 260 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 TMEM206Q9H813 350 aa13.3□□□□□ -0.28
LIN54-206ENST00000506560 MAFBQ9Y5Q3 323 aaPredicted RBP13.3□□□□□ -0.28
LIN54-206ENST00000506560 STAM2O75886 525 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 MAPTP10636 758 aaKnown RBP13.29□□□□□ -0.28
LIN54-206ENST00000506560 KLRC1P26715 233 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 CBX1P83916 185 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 EMC2Q15006 297 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 ARHGAP44Q17R89 818 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 ILDR2Q71H61 639 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 XXYLT1Q8NBI6 393 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 SYN2Q92777 582 aaPredicted RBP13.29□□□□□ -0.28
LIN54-206ENST00000506560 SECISBP2LQ93073 1101 aaKnown RBP13.29□□□□□ -0.28
LIN54-206ENST00000506560 CEP89Q96ST8 783 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 INTS2Q9H0H0 1204 aaKnown RBP13.29□□□□□ -0.28
LIN54-206ENST00000506560 ST6GALNAC4Q9H4F1 302 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 MYO1AQ9UBC5 1043 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 DNAJC12Q9UKB3 198 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 DGAT1O75907 488 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 OATP04181 439 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 VAMP7P51809 220 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 WNT7BP56706 349 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 PTPROQ16827 1216 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 XKR3Q5GH77 459 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 ZNF662Q6ZS27 426 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 TRAPPC11Q7Z392 1133 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 MAP4K3Q8IVH8 894 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 ARHGEF19Q8IW93 802 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 SLC10A4Q96EP9 437 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 ZNF668Q96K58 619 aaPredicted RBP13.29□□□□□ -0.28
LIN54-206ENST00000506560 GOLPH3Q9H4A6 298 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 ATP6V0A4Q9HBG4 840 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 SMARCAL1Q9NZC9 954 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 MYO6Q9UM54 1294 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 DNAH12Q6ZR08 3092 aa13.29□□□□□ -0.28
LIN54-206ENST00000506560 EFCAB8A8MWE9 144 aa13.28□□□□□ -0.28
LIN54-206ENST00000506560 TCF7P36402 384 aaPredicted RBP13.28□□□□□ -0.28
LIN54-206ENST00000506560 POLGP54098 1239 aaPredicted RBP13.28□□□□□ -0.28
LIN54-206ENST00000506560 ERVK-9P63128 1117 aa13.28□□□□□ -0.28
LIN54-206ENST00000506560 DRAP1Q14919 205 aaPredicted RBP13.28□□□□□ -0.28
LIN54-206ENST00000506560 SLC18A3Q16572 532 aa13.28□□□□□ -0.28
LIN54-206ENST00000506560 NOA1Q8NC60 698 aaKnown RBP13.28□□□□□ -0.28
LIN54-206ENST00000506560 MMP19Q99542 508 aa13.28□□□□□ -0.28
LIN54-206ENST00000506560 RNF216Q9NWF9 866 aaPredicted RBP13.28□□□□□ -0.28
LIN54-206ENST00000506560 ZNF446Q9NWS9 450 aa13.28□□□□□ -0.28
LIN54-206ENST00000506560 EHD2Q9NZN4 543 aa13.28□□□□□ -0.28
LIN54-206ENST00000506560 PRDM4Q9UKN5 801 aa13.28□□□□□ -0.28
LIN54-206ENST00000506560 TTLL13PA6NNM8 815 aa13.28□□□□□ -0.28
LIN54-206ENST00000506560 PDE2AO00408 941 aaPredicted RBP13.28□□□□□ -0.28
LIN54-206ENST00000506560 CXCR5P32302 372 aa13.28□□□□□ -0.28
LIN54-206ENST00000506560 CHMP4BP1P59074 171 aa13.28□□□□□ -0.28
LIN54-206ENST00000506560 SNRNP35Q16560 246 aaKnown RBP13.28□□□□□ -0.28
LIN54-206ENST00000506560 LMBRD2Q68DH5 695 aaPredicted RBP13.28□□□□□ -0.28
LIN54-206ENST00000506560 PALB2Q86YC2 1186 aa13.28□□□□□ -0.28
LIN54-206ENST00000506560 GOLGA5Q8TBA6 731 aa13.28□□□□□ -0.28
LIN54-206ENST00000506560 ZBTB45Q96K62 511 aaPredicted RBP13.28□□□□□ -0.28
LIN54-206ENST00000506560 ACP6Q9NPH0 428 aa13.28□□□□□ -0.28
LIN54-206ENST00000506560 DNAJC25-GNG10A0A024R161 153 aa13.27□□□□□ -0.28
LIN54-206ENST00000506560 IGKV6D-21A0A0A0MT36 114 aa13.27□□□□□ -0.28
LIN54-206ENST00000506560 GTPBP10A4D1E9 387 aaKnown RBP13.27□□□□□ -0.28
LIN54-206ENST00000506560 SPDYE4A6NLX3 237 aa13.27□□□□□ -0.28
LIN54-206ENST00000506560 F8VZ95 297 aa13.27□□□□□ -0.28
LIN54-206ENST00000506560 HNRNPDLO14979 420 aaKnown RBP13.27□□□□□ -0.28
LIN54-206ENST00000506560 EVI5O60447 810 aa13.27□□□□□ -0.28
LIN54-206ENST00000506560 GLRA2P23416 452 aa13.27□□□□□ -0.28
LIN54-206ENST00000506560 CLCN6P51797 869 aa13.27□□□□□ -0.28
LIN54-206ENST00000506560 SMTNP53814 917 aa13.27□□□□□ -0.28
LIN54-206ENST00000506560 MAP2K1Q02750 393 aaPredicted RBP13.27□□□□□ -0.28
LIN54-206ENST00000506560 SRGAP1Q7Z6B7 1085 aa13.27□□□□□ -0.28
LIN54-206ENST00000506560 KIFAP3Q92845 792 aa13.27□□□□□ -0.28
LIN54-206ENST00000506560 SEMA4DQ92854 862 aa13.27□□□□□ -0.28
LIN54-206ENST00000506560 ZBTB9Q96C00 473 aa13.27□□□□□ -0.28
LIN54-206ENST00000506560 MMS19Q96T76 1030 aa13.27□□□□□ -0.28
LIN54-206ENST00000506560 NTPCRQ9BSD7 190 aaKnown RBP13.27□□□□□ -0.28
LIN54-206ENST00000506560 HAPLN2Q9GZV7 340 aa13.27□□□□□ -0.28
LIN54-206ENST00000506560 TMEM117Q9H0C3 514 aa13.27□□□□□ -0.28
LIN54-206ENST00000506560 DDX41Q9UJV9 622 aaKnown RBP13.27□□□□□ -0.28
LIN54-206ENST00000506560 KRT13P13646 458 aa13.27□□□□□ -0.29
LIN54-206ENST00000506560 DNA2P51530 1060 aa13.27□□□□□ -0.29
LIN54-206ENST00000506560 KCTD2Q14681 263 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms