RNA–Protein interactions for RNA: ENST00000506430.2

AP3S1-204, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-204ENST00000506430 RNF149Q8NC42 400 aa19.28■□□□□ 0.68
AP3S1-204ENST00000506430 MRPS27Q92552 414 aaKnown RBP19.28■□□□□ 0.68
AP3S1-204ENST00000506430 MSLNLQ96KJ4 702 aa19.28■□□□□ 0.68
AP3S1-204ENST00000506430 ZNF558Q96NG5 402 aa19.28■□□□□ 0.68
AP3S1-204ENST00000506430 MTRQ99707 1265 aa19.28■□□□□ 0.68
AP3S1-204ENST00000506430 C1QTNF1Q9BXJ1 281 aa19.28■□□□□ 0.68
AP3S1-204ENST00000506430 FAM105AQ9NUU6 356 aa19.28■□□□□ 0.68
AP3S1-204ENST00000506430 CD207Q9UJ71 328 aa19.28■□□□□ 0.68
AP3S1-204ENST00000506430 POTEMA6NI47 508 aa19.27■□□□□ 0.68
AP3S1-204ENST00000506430 COL9A1P20849 921 aa19.27■□□□□ 0.68
AP3S1-204ENST00000506430 HOXA11P31270 313 aaPredicted RBP19.27■□□□□ 0.68
AP3S1-204ENST00000506430 ZP2Q05996 745 aa19.27■□□□□ 0.68
AP3S1-204ENST00000506430 SMAD2Q15796 467 aaKnown RBP19.27■□□□□ 0.68
AP3S1-204ENST00000506430 PLPP4Q5VZY2 271 aa19.27■□□□□ 0.68
AP3S1-204ENST00000506430 SRGAP1Q7Z6B7 1085 aa19.27■□□□□ 0.68
AP3S1-204ENST00000506430 TCP11Q8WWU5 503 aa19.27■□□□□ 0.68
AP3S1-204ENST00000506430 TCF25Q9BQ70 676 aa19.27■□□□□ 0.68
AP3S1-204ENST00000506430 AGPAT5Q9NUQ2 364 aa19.27■□□□□ 0.68
AP3S1-204ENST00000506430 SPG21Q9NZD8 308 aa19.27■□□□□ 0.68
AP3S1-204ENST00000506430 PUF60Q9UHX1 559 aaKnown RBP19.27■□□□□ 0.68
AP3S1-204ENST00000506430 BARX2Q9UMQ3 279 aaPredicted RBP19.27■□□□□ 0.68
AP3S1-204ENST00000506430 FAM50BQ9Y247 325 aa19.27■□□□□ 0.68
AP3S1-204ENST00000506430 LZTS1Q9Y250 596 aa19.27■□□□□ 0.68
AP3S1-204ENST00000506430 HIDE1A8MVS5 230 aa19.26■□□□□ 0.67
AP3S1-204ENST00000506430 NT5C1B-RDH14C9J2C7 533 aa19.26■□□□□ 0.67
AP3S1-204ENST00000506430 PI4K2BG5E9Z4 385 aa19.26■□□□□ 0.67
AP3S1-204ENST00000506430 ASAP2O43150 1006 aa19.26■□□□□ 0.67
AP3S1-204ENST00000506430 ZNF623O75123 536 aa19.26■□□□□ 0.67
AP3S1-204ENST00000506430 SMAD4Q13485 552 aaKnown RBP19.26■□□□□ 0.67
AP3S1-204ENST00000506430 ZNF174Q15697 407 aa19.26■□□□□ 0.67
AP3S1-204ENST00000506430 DUSP6Q16828 381 aa19.26■□□□□ 0.67
AP3S1-204ENST00000506430 SLC39A11Q8N1S5 342 aa19.26■□□□□ 0.67
AP3S1-204ENST00000506430 FBXO18Q8NFZ0 1043 aa19.26■□□□□ 0.67
AP3S1-204ENST00000506430 VN1R2Q8NFZ6 395 aa19.26■□□□□ 0.67
AP3S1-204ENST00000506430 PIGOQ8TEQ8 1089 aa19.26■□□□□ 0.67
AP3S1-204ENST00000506430 ZSCAN31Q96LW9 406 aaPredicted RBP19.26■□□□□ 0.67
AP3S1-204ENST00000506430 ANKEF1Q9NU02 776 aa19.26■□□□□ 0.67
AP3S1-204ENST00000506430 PCDHB2Q9Y5E7 798 aa19.26■□□□□ 0.67
AP3S1-204ENST00000506430 GAS2O43903 313 aaKnown RBP19.25■□□□□ 0.67
AP3S1-204ENST00000506430 OFD1O75665 1012 aa19.25■□□□□ 0.67
AP3S1-204ENST00000506430 SPATA31C1P0DKV0 1188 aa19.25■□□□□ 0.67
AP3S1-204ENST00000506430 SKIP12755 728 aa19.25■□□□□ 0.67
AP3S1-204ENST00000506430 PPM1AP35813 382 aa19.25■□□□□ 0.67
AP3S1-204ENST00000506430 RARRES1P49788 294 aa19.25■□□□□ 0.67
AP3S1-204ENST00000506430 BCAR1P56945 870 aa19.25■□□□□ 0.67
AP3S1-204ENST00000506430 KRT17Q04695 432 aa19.25■□□□□ 0.67
AP3S1-204ENST00000506430 UBXN11Q5T124 520 aa19.25■□□□□ 0.67
AP3S1-204ENST00000506430 PDE12Q6L8Q7 609 aaKnown RBP19.25■□□□□ 0.67
AP3S1-204ENST00000506430 ADHFE1Q8IWW8 467 aa19.25■□□□□ 0.67
AP3S1-204ENST00000506430 ASAP3Q8TDY4 903 aa19.25■□□□□ 0.67
AP3S1-204ENST00000506430 MRPL9Q9BYD2 267 aaKnown RBP19.25■□□□□ 0.67
AP3S1-204ENST00000506430 FOXP1Q9H334 677 aaPredicted RBP19.25■□□□□ 0.67
AP3S1-204ENST00000506430 C11orf16Q9NQ32 467 aa19.25■□□□□ 0.67
AP3S1-204ENST00000506430 ENTPD7Q9NQZ7 604 aa19.25■□□□□ 0.67
AP3S1-204ENST00000506430 PRKAG3Q9UGI9 489 aa19.25■□□□□ 0.67
AP3S1-204ENST00000506430 INPP5FQ9Y2H2 1132 aa19.25■□□□□ 0.67
AP3S1-204ENST00000506430 C19orf67A6NJJ6 358 aa19.24■□□□□ 0.67
AP3S1-204ENST00000506430 DGAT1O75907 488 aa19.24■□□□□ 0.67
AP3S1-204ENST00000506430 EYA4O95677 639 aa19.24■□□□□ 0.67
AP3S1-204ENST00000506430 TECP42680 631 aa19.24■□□□□ 0.67
AP3S1-204ENST00000506430 ALDH7A1P49419 539 aaKnown RBP19.24■□□□□ 0.67
AP3S1-204ENST00000506430 RBM25P49756 843 aaKnown RBP19.24■□□□□ 0.67
AP3S1-204ENST00000506430 RAB27AP51159 221 aa19.24■□□□□ 0.67
AP3S1-204ENST00000506430 AFF1P51825 1210 aaKnown RBP19.24■□□□□ 0.67
AP3S1-204ENST00000506430 COASYQ13057 564 aa19.24■□□□□ 0.67
AP3S1-204ENST00000506430 NOMO2Q5JPE7 1267 aa19.24■□□□□ 0.67
AP3S1-204ENST00000506430 GLB1LQ6UWU2 654 aa19.24■□□□□ 0.67
AP3S1-204ENST00000506430 TMC7Q7Z402 723 aa19.24■□□□□ 0.67
AP3S1-204ENST00000506430 TMEM173Q86WV6 379 aaPredicted RBP19.24■□□□□ 0.67
AP3S1-204ENST00000506430 CATSPER3Q86XQ3 398 aa19.24■□□□□ 0.67
AP3S1-204ENST00000506430 SH2B1Q9NRF2 756 aaPredicted RBP19.24■□□□□ 0.67
AP3S1-204ENST00000506430 TBC1D13Q9NVG8 400 aa19.24■□□□□ 0.67
AP3S1-204ENST00000506430 FAM86C2PA6NEL3 165 aa19.23■□□□□ 0.67
AP3S1-204ENST00000506430 ZC3H11AO75152 810 aaKnown RBP eCLIP19.23■□□□□ 0.67
AP3S1-204ENST00000506430 MED24O75448 989 aa19.23■□□□□ 0.67
AP3S1-204ENST00000506430 ARL2P36404 184 aa19.23■□□□□ 0.67
AP3S1-204ENST00000506430 PTENP60484 403 aa19.23■□□□□ 0.67
AP3S1-204ENST00000506430 HMGN5P82970 282 aaKnown RBP19.23■□□□□ 0.67
AP3S1-204ENST00000506430 MXD4Q14582 209 aaPredicted RBP19.23■□□□□ 0.67
AP3S1-204ENST00000506430 AGMOQ6ZNB7 445 aa19.23■□□□□ 0.67
AP3S1-204ENST00000506430 MRPL10Q7Z7H8 261 aaKnown RBP19.23■□□□□ 0.67
AP3S1-204ENST00000506430 FAM184AQ8NB25 1140 aa19.23■□□□□ 0.67
AP3S1-204ENST00000506430 SMRP1Q8NCR6 262 aa19.23■□□□□ 0.67
AP3S1-204ENST00000506430 CDCA3Q99618 268 aaPredicted RBP19.23■□□□□ 0.67
AP3S1-204ENST00000506430 LRFN3Q9BTN0 628 aa19.23■□□□□ 0.67
AP3S1-204ENST00000506430 NRDE2Q9H7Z3 1164 aa19.23■□□□□ 0.67
AP3S1-204ENST00000506430 NGRNQ9NPE2 291 aaKnown RBP19.23■□□□□ 0.67
AP3S1-204ENST00000506430 B4GALT3O60512 393 aa19.22■□□□□ 0.67
AP3S1-204ENST00000506430 TSPAN1O60635 241 aa19.22■□□□□ 0.67
AP3S1-204ENST00000506430 XRCC6P12956 609 aaKnown RBP eCLIP19.22■□□□□ 0.67
AP3S1-204ENST00000506430 GLRA2P23416 452 aa19.22■□□□□ 0.67
AP3S1-204ENST00000506430 CAPSQ13938 189 aa19.22■□□□□ 0.67
AP3S1-204ENST00000506430 KCNC3Q14003 757 aa19.22■□□□□ 0.67
AP3S1-204ENST00000506430 NBR1Q14596 966 aa19.22■□□□□ 0.67
AP3S1-204ENST00000506430 MAEAQ7L5Y9 396 aa19.22■□□□□ 0.67
AP3S1-204ENST00000506430 ZNF280BQ86YH2 543 aa19.22■□□□□ 0.67
AP3S1-204ENST00000506430 NOSTRINQ8IVI9 506 aa19.22■□□□□ 0.67
AP3S1-204ENST00000506430 PGBD4Q96DM1 585 aa19.22■□□□□ 0.67
AP3S1-204ENST00000506430 CPB2Q96IY4 423 aa19.22■□□□□ 0.67
AP3S1-204ENST00000506430 DNAJB4Q9UDY4 337 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms