RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 UBXN11Q5T124 520 aa19.77■□□□□ 0.76
SMN1-204ENST00000506163 FIBCD1Q8N539 461 aa19.77■□□□□ 0.76
SMN1-204ENST00000506163 LINC00301Q8NCQ3 95 aa19.77■□□□□ 0.76
SMN1-204ENST00000506163 TRAIPQ9BWF2 469 aa19.77■□□□□ 0.76
SMN1-204ENST00000506163 NFKBIZQ9BYH8 718 aa19.77■□□□□ 0.76
SMN1-204ENST00000506163 BLOC1S4Q9NUP1 217 aa19.77■□□□□ 0.76
SMN1-204ENST00000506163 TMEM161AQ9NX61 479 aa19.77■□□□□ 0.76
SMN1-204ENST00000506163 HCSTQ9UBK5 93 aa19.77■□□□□ 0.76
SMN1-204ENST00000506163 MRPL42Q9Y6G3 142 aaKnown RBP19.77■□□□□ 0.76
SMN1-204ENST00000506163 MORC2Q9Y6X9 1032 aaPredicted RBP19.77■□□□□ 0.76
SMN1-204ENST00000506163 FNDC1Q4ZHG4 1894 aaPredicted RBP19.77■□□□□ 0.76
SMN1-204ENST00000506163 MEIS3P2A8K0S8 358 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 TSPAN1O60635 241 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 UBA7P41226 1012 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 BTG3Q14201 252 aaPredicted RBP19.76■□□□□ 0.75
SMN1-204ENST00000506163 EPC2Q52LR7 807 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 ARSHQ5FYA8 562 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 CDCA2Q69YH5 1023 aaPredicted RBP19.76■□□□□ 0.75
SMN1-204ENST00000506163 TMEM192Q8IY95 271 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 SYT2Q8N9I0 419 aaPredicted RBP19.76■□□□□ 0.75
SMN1-204ENST00000506163 GDPD5Q8WTR4 605 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 CLP1Q92989 425 aaKnown RBP19.76■□□□□ 0.75
SMN1-204ENST00000506163 KIFC3Q9BVG8 833 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 CCSER1Q9C0I3 900 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 LRFN2Q9ULH4 789 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 REV3LO60673 3130 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 MYH15Q9Y2K3 1946 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 LRRIQ4A6NIV6 560 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 TTLL13PA6NNM8 815 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 INO80B-WBP1J3KQ70 363 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 B4GALT5O43286 388 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 PLA2G4BP0C869 781 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 PLCG1P19174 1290 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 CLLU1OSQ5K130 101 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 TWF2Q6IBS0 349 aaKnown RBP19.76■□□□□ 0.75
SMN1-204ENST00000506163 LRRC55Q6ZSA7 311 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 CMTR2Q8IYT2 770 aaKnown RBP19.76■□□□□ 0.75
SMN1-204ENST00000506163 CPB2Q96IY4 423 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 CHAMP1Q96JM3 812 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 NT5C3AQ9H0P0 336 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 DACT1Q9NYF0 836 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 USP20Q9Y2K6 914 aa19.76■□□□□ 0.75
SMN1-204ENST00000506163 MYO7AQ13402 2215 aa19.75■□□□□ 0.75
SMN1-204ENST00000506163 NPHP3-ACAD11A0A0J9YXS1 232 aa19.75■□□□□ 0.75
SMN1-204ENST00000506163 TBKBP1A7MCY6 615 aa19.75■□□□□ 0.75
SMN1-204ENST00000506163 HIP1RO75146 1068 aa19.75■□□□□ 0.75
SMN1-204ENST00000506163 EDN1P05305 212 aa19.75■□□□□ 0.75
SMN1-204ENST00000506163 PDIA4P13667 645 aaKnown RBP19.75■□□□□ 0.75
SMN1-204ENST00000506163 ARF4P18085 180 aaPredicted RBP19.75■□□□□ 0.75
SMN1-204ENST00000506163 IGFBP4P22692 258 aa19.75■□□□□ 0.75
SMN1-204ENST00000506163 LONRF3Q496Y0 759 aa19.75■□□□□ 0.75
SMN1-204ENST00000506163 RNF169Q8NCN4 708 aa19.75■□□□□ 0.75
SMN1-204ENST00000506163 SYMPKQ92797 1274 aaKnown RBP19.75■□□□□ 0.75
SMN1-204ENST00000506163 LPPQ93052 612 aa19.75■□□□□ 0.75
SMN1-204ENST00000506163 CASD1Q96PB1 797 aa19.75■□□□□ 0.75
SMN1-204ENST00000506163 GAS2L1Q99501 681 aaPredicted RBP19.75■□□□□ 0.75
SMN1-204ENST00000506163 SFI1A8K8P3 1242 aa19.74■□□□□ 0.75
SMN1-204ENST00000506163 SLC26A4O43511 780 aa19.74■□□□□ 0.75
SMN1-204ENST00000506163 BRD1O95696 1058 aa19.74■□□□□ 0.75
SMN1-204ENST00000506163 SSBP05455 408 aaKnown RBP eCLIP19.74■□□□□ 0.75
SMN1-204ENST00000506163 BMPR1AP36894 532 aa19.74■□□□□ 0.75
SMN1-204ENST00000506163 RAD51AP2Q09MP3 1159 aa19.74■□□□□ 0.75
SMN1-204ENST00000506163 KCTD17Q8N5Z5 321 aa19.74■□□□□ 0.75
SMN1-204ENST00000506163 KRI1Q8N9T8 703 aaKnown RBP19.74■□□□□ 0.75
SMN1-204ENST00000506163 CDK5RAP3Q96JB5 506 aa19.74■□□□□ 0.75
SMN1-204ENST00000506163 ZNF396Q96N95 335 aaPredicted RBP19.74■□□□□ 0.75
SMN1-204ENST00000506163 EIF2AQ9BY44 585 aaKnown RBP19.74■□□□□ 0.75
SMN1-204ENST00000506163 CCDC113Q9H0I3 377 aa19.74■□□□□ 0.75
SMN1-204ENST00000506163 FZD8Q9H461 694 aa19.74■□□□□ 0.75
SMN1-204ENST00000506163 FAM105AQ9NUU6 356 aa19.74■□□□□ 0.75
SMN1-204ENST00000506163 DAXXQ9UER7 740 aaPredicted RBP19.74■□□□□ 0.75
SMN1-204ENST00000506163 MTCH2Q9Y6C9 303 aa19.74■□□□□ 0.75
SMN1-204ENST00000506163 NLRC5Q86WI3 1866 aa19.74■□□□□ 0.75
SMN1-204ENST00000506163 A0A087X0B3 334 aa19.73■□□□□ 0.75
SMN1-204ENST00000506163 ZNF623O75123 536 aa19.73■□□□□ 0.75
SMN1-204ENST00000506163 EOMESO95936 686 aa19.73■□□□□ 0.75
SMN1-204ENST00000506163 POU3F3P20264 500 aaPredicted RBP19.73■□□□□ 0.75
SMN1-204ENST00000506163 GUCY2CP25092 1073 aa19.73■□□□□ 0.75
SMN1-204ENST00000506163 NAMPTP43490 491 aa19.73■□□□□ 0.75
SMN1-204ENST00000506163 MCM6Q14566 821 aa19.73■□□□□ 0.75
SMN1-204ENST00000506163 STK38Q15208 465 aa19.73■□□□□ 0.75
SMN1-204ENST00000506163 CDR2LQ86X02 465 aaPredicted RBP19.73■□□□□ 0.75
SMN1-204ENST00000506163 FBXO22Q8NEZ5 403 aa19.73■□□□□ 0.75
SMN1-204ENST00000506163 MAFAQ8NHW3 353 aaPredicted RBP19.73■□□□□ 0.75
SMN1-204ENST00000506163 KIFAP3Q92845 792 aa19.73■□□□□ 0.75
SMN1-204ENST00000506163 CALML4Q96GE6 196 aa19.73■□□□□ 0.75
SMN1-204ENST00000506163 TYW1Q9NV66 732 aaKnown RBP19.73■□□□□ 0.75
SMN1-204ENST00000506163 PCDHB2Q9Y5E7 798 aa19.73■□□□□ 0.75
SMN1-204ENST00000506163 SPTBN5Q9NRC6 3674 aaKnown RBP19.72■□□□□ 0.75
SMN1-204ENST00000506163 C5orf67F2Z3F1 127 aa19.72■□□□□ 0.75
SMN1-204ENST00000506163 SPTLC2O15270 562 aa19.72■□□□□ 0.75
SMN1-204ENST00000506163 CACNB1Q02641 598 aaPredicted RBP19.72■□□□□ 0.75
SMN1-204ENST00000506163 DNM1Q05193 864 aaKnown RBP19.72■□□□□ 0.75
SMN1-204ENST00000506163 NAALADL2Q58DX5 795 aa19.72■□□□□ 0.75
SMN1-204ENST00000506163 PPP4R3CPQ6ZMV5 832 aa19.72■□□□□ 0.75
SMN1-204ENST00000506163 MRPL10Q7Z7H8 261 aaKnown RBP19.72■□□□□ 0.75
SMN1-204ENST00000506163 SMG8Q8ND04 991 aaKnown RBP19.72■□□□□ 0.75
SMN1-204ENST00000506163 HELQQ8TDG4 1101 aa19.72■□□□□ 0.75
SMN1-204ENST00000506163 RAD54LQ92698 747 aa19.72■□□□□ 0.75
SMN1-204ENST00000506163 TMEM117Q9H0C3 514 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms