RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 KCNC3Q14003 757 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 NOMO2Q5JPE7 1267 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 PLA2G4FQ68DD2 849 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 KIAA1841Q6NSI8 718 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 FAM43BQ6ZT52 329 aaPredicted RBP9.27□□□□□ -0.93
SNF8-204ENST00000506104 CCDC149Q6ZUS6 474 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 TMEM173Q86WV6 379 aaPredicted RBP9.27□□□□□ -0.93
SNF8-204ENST00000506104 GLYCTKQ8IVS8 523 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 FEZF2Q8TBJ5 459 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 NKD2Q969F2 451 aaPredicted RBP9.27□□□□□ -0.93
SNF8-204ENST00000506104 IGSF21Q96ID5 467 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 HINFPQ9BQA5 517 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 APOL6Q9BWW8 343 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 EMILIN2Q9BXX0 1053 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 INO80BQ9C086 356 aaPredicted RBP9.27□□□□□ -0.93
SNF8-204ENST00000506104 ZMYND12Q9H0C1 365 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 ZBP1Q9H171 429 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 NRDE2Q9H7Z3 1164 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 NCOA5Q9HCD5 579 aaKnown RBP9.27□□□□□ -0.93
SNF8-204ENST00000506104 TBC1D13Q9NVG8 400 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 DNAJB4Q9UDY4 337 aa9.27□□□□□ -0.93
SNF8-204ENST00000506104 CIZ1Q9ULV3 898 aaPredicted RBP9.27□□□□□ -0.93
SNF8-204ENST00000506104 PRG3Q9Y2Y8 225 aaPredicted RBP9.27□□□□□ -0.93
SNF8-204ENST00000506104 ESYT2A0FGR8 921 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 PRPF3O43395 683 aaKnown RBP9.26□□□□□ -0.93
SNF8-204ENST00000506104 CDC45O75419 566 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 TDP2O95551 362 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 POMCP01189 267 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 CFHP08603 1231 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 CTSAP10619 480 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 SLC11A1P49279 550 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 GIT2Q14161 759 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 SPECC1Q5M775 1068 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 OTOP3Q7RTS5 596 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 DDX53Q86TM3 631 aaKnown RBP9.26□□□□□ -0.93
SNF8-204ENST00000506104 ZNF598Q86UK7 904 aaKnown RBP9.26□□□□□ -0.93
SNF8-204ENST00000506104 PPFIBP1Q86W92 1011 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 TRIM22Q8IYM9 498 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 ADSSL1Q8N142 457 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 SIX5Q8N196 739 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 ST13P5Q8NFI4 369 aaPredicted RBP9.26□□□□□ -0.93
SNF8-204ENST00000506104 TBCKQ8TEA7 893 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 BCL7CQ8WUZ0 217 aaPredicted RBP9.26□□□□□ -0.93
SNF8-204ENST00000506104 PGBD4Q96DM1 585 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 LARP6Q9BRS8 491 aaKnown RBP9.26□□□□□ -0.93
SNF8-204ENST00000506104 SFXN1Q9H9B4 322 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 PIDD1Q9HB75 910 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 MRPL17Q9NRX2 175 aaKnown RBP9.26□□□□□ -0.93
SNF8-204ENST00000506104 FAM105AQ9NUU6 356 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 FAN1Q9Y2M0 1017 aa9.26□□□□□ -0.93
SNF8-204ENST00000506104 PTPRZ1P23471 2315 aaPredicted RBP9.26□□□□□ -0.93
SNF8-204ENST00000506104 DENND4AQ7Z401 1863 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 PRR23AA6NEV1 266 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 CPLX1O14810 134 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 URODP06132 367 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 GALTP07902 379 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 SPATA31D3P0C874 917 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 OR1G1P47890 313 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 POLGP54098 1239 aaPredicted RBP9.25□□□□□ -0.93
SNF8-204ENST00000506104 SSRP1Q08945 709 aaKnown RBP9.25□□□□□ -0.93
SNF8-204ENST00000506104 STK3Q13188 491 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 TDGQ13569 410 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 XKR3Q5GH77 459 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 SPATA31D4Q6ZUB0 917 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 ZNF280BQ86YH2 543 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 TEX2Q8IWB9 1127 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 ZDHHC14Q8IZN3 488 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 ZNF710Q8N1W2 664 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 LINC01465Q8N7H1 131 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 SLC22A17Q8WUG5 538 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 RIN2Q8WYP3 895 aaPredicted RBP9.25□□□□□ -0.93
SNF8-204ENST00000506104 SLC5A5Q92911 643 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 TMEM143Q96AN5 459 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 KLHL5Q96PQ7 755 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 RIT2Q99578 217 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 CHST12Q9NRB3 414 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 CA14Q9ULX7 337 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 PCDHB2Q9Y5E7 798 aa9.25□□□□□ -0.93
SNF8-204ENST00000506104 CCDC195A0A1B0GUA6 201 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 PI15O43692 258 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 NARSO43776 548 aaKnown RBP9.24□□□□□ -0.93
SNF8-204ENST00000506104 OFD1O75665 1012 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 ERLIN2O94905 339 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 ALDH2P05091 517 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 ITGA4P13612 1032 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 CIITAP33076 1130 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 RAB27AP51159 221 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 USP11P51784 963 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 NPEPPSP55786 919 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 CDC42EP1Q00587 391 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 PTPN14Q15678 1187 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 LETM2Q2VYF4 491 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 ELMSAN1Q6PJG2 1045 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 PALB2Q86YC2 1186 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 CRYGNQ8WXF5 182 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 RSAD2Q8WXG1 361 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 SLC7A3Q8WY07 619 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 LENG9Q96B70 501 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 CEP170P1Q96L14 293 aa9.24□□□□□ -0.93
SNF8-204ENST00000506104 CCDC43Q96MW1 224 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms