RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 SP7Q8TDD2 431 aaPredicted RBP10.89□□□□□ -0.67
NR1I3-220ENST00000505005 SPIRE2Q8WWL2 714 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 LARP4BQ92615 738 aaKnown RBP10.89□□□□□ -0.67
NR1I3-220ENST00000505005 P2RX5Q93086 422 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 TMEM143Q96AN5 459 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 VWCEQ96DN2 955 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 NTPCRQ9BSD7 190 aaKnown RBP10.89□□□□□ -0.67
NR1I3-220ENST00000505005 TMEM117Q9H0C3 514 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 POLR3FQ9H1D9 316 aaPredicted RBP10.89□□□□□ -0.67
NR1I3-220ENST00000505005 TMEM134Q9H6X4 195 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 IFT122Q9HBG6 1241 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 AGPAT5Q9NUQ2 364 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 PCDH10Q9P2E7 1040 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 WRAP73Q9P2S5 460 aaPredicted RBP10.89□□□□□ -0.67
NR1I3-220ENST00000505005 SEL1LQ9UBV2 794 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 USP25Q9UHP3 1055 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 STXBP5LQ9Y2K9 1186 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 PCDHB12Q9Y5F1 795 aa10.89□□□□□ -0.67
NR1I3-220ENST00000505005 LRRIQ4A6NIV6 560 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 ACKR2O00590 384 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 N4BP3O15049 544 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 UPP2O95045 317 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 PLA2G4BP0C869 781 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 MAPTP10636 758 aaKnown RBP10.88□□□□□ -0.67
NR1I3-220ENST00000505005 POU3F3P20264 500 aaPredicted RBP10.88□□□□□ -0.67
NR1I3-220ENST00000505005 PPM1AP35813 382 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 UBE3AQ05086 875 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 ALCAMQ13740 583 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 DSC3Q14574 896 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 ZRSR1Q15695 479 aaKnown RBP10.88□□□□□ -0.67
NR1I3-220ENST00000505005 TMEM132AQ24JP5 1023 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 TMEM119Q4V9L6 283 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 RINT1Q6NUQ1 792 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 GLB1LQ6UWU2 654 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 URGCPQ8TCY9 931 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 KCNN1Q92952 543 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 LRCH3Q96II8 777 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 USP28Q96RU2 1077 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 C11orf84Q9BUA3 381 aaPredicted RBP10.88□□□□□ -0.67
NR1I3-220ENST00000505005 MTMR10Q9NXD2 777 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 PUF60Q9UHX1 559 aaKnown RBP10.88□□□□□ -0.67
NR1I3-220ENST00000505005 CIZ1Q9ULV3 898 aaPredicted RBP10.88□□□□□ -0.67
NR1I3-220ENST00000505005 PIN4Q9Y237 131 aaKnown RBP10.88□□□□□ -0.67
NR1I3-220ENST00000505005 CLIC4Q9Y696 253 aa10.88□□□□□ -0.67
NR1I3-220ENST00000505005 ADGRA3Q8IWK6 1321 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 ARID2Q68CP9 1835 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 TBCAO75347 108 aaKnown RBP10.87□□□□□ -0.67
NR1I3-220ENST00000505005 BRD1O95696 1058 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 SSBP05455 408 aaKnown RBP eCLIP10.87□□□□□ -0.67
NR1I3-220ENST00000505005 MYL1P05976 194 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 CA3P07451 260 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 PLS3P13797 630 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 GAP43P17677 238 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 LAG3P18627 525 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 GLRA2P23416 452 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 ME1P48163 572 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 DEFB103AP81534 67 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 KRT17Q04695 432 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 DCAF4L1Q3SXM0 396 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 CDCA2Q69YH5 1023 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-220ENST00000505005 SLC27A1Q6PCB7 646 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.87□□□□□ -0.67
NR1I3-220ENST00000505005 C1orf186Q6ZWK4 172 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 ECHDC2Q86YB7 292 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 FBXO22Q8NEZ5 403 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 TMEM40Q8WWA1 233 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 RAD54LQ92698 747 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 CLP1Q92989 425 aaKnown RBP10.87□□□□□ -0.67
NR1I3-220ENST00000505005 ZNF689Q96CS4 500 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-220ENST00000505005 TSPAN18Q96SJ8 248 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 CSRNP2Q9H175 543 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 NKX2-4Q9H2Z4 354 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 CDHR5Q9HBB8 845 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 PARVGQ9HBI0 331 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 KMT5AQ9NQR1 393 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 XPNPEP1Q9NQW7 623 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 FAM105AQ9NUU6 356 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 FBXO2Q9UK22 296 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-220ENST00000505005 RCOR1Q9UKL0 485 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 GIT1Q9Y2X7 761 aa10.87□□□□□ -0.67
NR1I3-220ENST00000505005 A0A1B0GUA9 196 aa10.86□□□□□ -0.67
NR1I3-220ENST00000505005 TMEM150BA6NC51 233 aa10.86□□□□□ -0.67
NR1I3-220ENST00000505005 GOLGA6L4A6NEF3 574 aa10.86□□□□□ -0.67
NR1I3-220ENST00000505005 CCDC169A6NNP5 214 aa10.86□□□□□ -0.67
NR1I3-220ENST00000505005 E9PMD0 336 aa10.86□□□□□ -0.67
NR1I3-220ENST00000505005 C5orf67F2Z3F1 127 aa10.86□□□□□ -0.67
NR1I3-220ENST00000505005 SOX1O00570 391 aaPredicted RBP10.86□□□□□ -0.67
NR1I3-220ENST00000505005 ZBTB39O15060 712 aa10.86□□□□□ -0.67
NR1I3-220ENST00000505005 FAM13AO94988 1023 aa10.86□□□□□ -0.67
NR1I3-220ENST00000505005 NCLP19338 710 aaKnown RBP10.86□□□□□ -0.67
NR1I3-220ENST00000505005 MARCKSP29966 332 aaPredicted RBP10.86□□□□□ -0.67
NR1I3-220ENST00000505005 BMPR1AP36894 532 aa10.86□□□□□ -0.67
NR1I3-220ENST00000505005 STAT6P42226 847 aa10.86□□□□□ -0.67
NR1I3-220ENST00000505005 SLC12A3P55017 1021 aa10.86□□□□□ -0.67
NR1I3-220ENST00000505005 TAP1Q03518 808 aa10.86□□□□□ -0.67
NR1I3-220ENST00000505005 CEBPZQ03701 1054 aaKnown RBP10.86□□□□□ -0.67
NR1I3-220ENST00000505005 GRB10Q13322 594 aa10.86□□□□□ -0.67
NR1I3-220ENST00000505005 PRPF4BQ13523 1007 aaKnown RBP10.86□□□□□ -0.67
NR1I3-220ENST00000505005 CAPSQ13938 189 aa10.86□□□□□ -0.67
NR1I3-220ENST00000505005 IL17AQ16552 155 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms